RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 PKD1L2Q7Z442 2459 aa10.55□□□□□ -0.72
CDT1-201ENST00000301019 USP9YO00507 2555 aaPredicted RBP10.55□□□□□ -0.72
CDT1-201ENST00000301019 IGHV4OR15-8A0A075B7B6 117 aa10.55□□□□□ -0.72
CDT1-201ENST00000301019 A0A087WW49 117 aa10.55□□□□□ -0.72
CDT1-201ENST00000301019 FAM223BA6NKX1 122 aa10.55□□□□□ -0.72
CDT1-201ENST00000301019 RPL18AQ02543 176 aaKnown RBP10.55□□□□□ -0.72
CDT1-201ENST00000301019 DGAT2L7PQ6IED9 249 aa10.55□□□□□ -0.72
CDT1-201ENST00000301019 LINC00336Q6ZUF6 198 aa10.55□□□□□ -0.72
CDT1-201ENST00000301019 IMUPQ9GZP8 106 aa10.55□□□□□ -0.72
CDT1-201ENST00000301019 COX7A2LO14548 114 aa10.54□□□□□ -0.72
CDT1-201ENST00000301019 LINC00308Q8TCZ7 52 aa10.54□□□□□ -0.72
CDT1-201ENST00000301019 CENPEQ02224 2701 aa10.54□□□□□ -0.72
CDT1-201ENST00000301019 RHPN1-AS1Q9BWJ2 59 aa10.54□□□□□ -0.72
CDT1-201ENST00000301019 COX6A2Q02221 97 aa10.54□□□□□ -0.72
CDT1-201ENST00000301019 TOMM7Q9P0U1 55 aa10.54□□□□□ -0.72
CDT1-201ENST00000301019 IGHG2P01859 326 aa10.53□□□□□ -0.72
CDT1-201ENST00000301019 ACYP1P07311 99 aa10.53□□□□□ -0.72
CDT1-201ENST00000301019 PRIMA1Q86XR5 153 aa10.53□□□□□ -0.72
CDT1-201ENST00000301019 DEFB121Q5J5C9 76 aa10.53□□□□□ -0.72
CDT1-201ENST00000301019 C5orf38Q86SI9 138 aa10.52□□□□□ -0.72
CDT1-201ENST00000301019 ACACBO00763 2458 aa10.52□□□□□ -0.72
CDT1-201ENST00000301019 TLN2Q9Y4G6 2542 aa10.52□□□□□ -0.72
CDT1-201ENST00000301019 A0A087WYN8 130 aa10.52□□□□□ -0.73
CDT1-201ENST00000301019 LINC01561Q8N1V8 128 aa10.52□□□□□ -0.73
CDT1-201ENST00000301019 FAM110DQ8TAY7 271 aaPredicted RBP10.52□□□□□ -0.73
CDT1-201ENST00000301019 ZFP36P26651 326 aaKnown RBP10.52□□□□□ -0.73
CDT1-201ENST00000301019 C22orf24Q9Y442 160 aa10.52□□□□□ -0.73
CDT1-201ENST00000301019 IGHV1-69P01742 117 aa10.51□□□□□ -0.73
CDT1-201ENST00000301019 C11orf68Q9H3H3 251 aaKnown RBP10.51□□□□□ -0.73
CDT1-201ENST00000301019 CELSR2Q9HCU4 2923 aa10.51□□□□□ -0.73
CDT1-201ENST00000301019 CCL21O00585 134 aa10.51□□□□□ -0.73
CDT1-201ENST00000301019 BRD3OSQ6XYD6 125 aa10.51□□□□□ -0.73
CDT1-201ENST00000301019 FAM19A1Q7Z5A9 133 aa10.51□□□□□ -0.73
CDT1-201ENST00000301019 MALP21145 153 aa10.5□□□□□ -0.73
CDT1-201ENST00000301019 PFN2P35080 140 aa10.5□□□□□ -0.73
CDT1-201ENST00000301019 SERP2Q8N6R1 65 aa10.5□□□□□ -0.73
CDT1-201ENST00000301019 TMEM190Q8WZ59 177 aa10.5□□□□□ -0.73
CDT1-201ENST00000301019 LINC00467Q9BRT7 94 aa10.5□□□□□ -0.73
CDT1-201ENST00000301019 FAM104AQ969W3 186 aa10.5□□□□□ -0.73
CDT1-201ENST00000301019 J3QLI3 93 aa10.5□□□□□ -0.73
CDT1-201ENST00000301019 SAA4P35542 130 aa10.5□□□□□ -0.73
CDT1-201ENST00000301019 PIMREGQ9BSJ6 248 aa10.5□□□□□ -0.73
CDT1-201ENST00000301019 TMEM243Q9BU79 118 aa10.5□□□□□ -0.73
CDT1-201ENST00000301019 SPANXDQ9BXN6 97 aa10.5□□□□□ -0.73
CDT1-201ENST00000301019 SPANXCQ9NY87 97 aa10.5□□□□□ -0.73
CDT1-201ENST00000301019 SNURFQ9Y675 71 aa10.49□□□□□ -0.73
CDT1-201ENST00000301019 GHRHP01286 108 aa10.49□□□□□ -0.73
CDT1-201ENST00000301019 PF4P02776 101 aa10.49□□□□□ -0.73
CDT1-201ENST00000301019 Q6ZSN1 163 aa10.49□□□□□ -0.73
CDT1-201ENST00000301019 TMEM258P61165 79 aa10.48□□□□□ -0.73
CDT1-201ENST00000301019 LECT2O14960 151 aa10.48□□□□□ -0.73
CDT1-201ENST00000301019 CXCL5P42830 114 aa10.47□□□□□ -0.73
CDT1-201ENST00000301019 MRPS36P82909 103 aaKnown RBP10.47□□□□□ -0.73
CDT1-201ENST00000301019 NIPBLQ6KC79 2804 aaeCLIP10.47□□□□□ -0.73
CDT1-201ENST00000301019 ENHOQ6UWT2 76 aa10.47□□□□□ -0.73
CDT1-201ENST00000301019 A0A0J9YX75 114 aa10.46□□□□□ -0.73
CDT1-201ENST00000301019 MINOS1Q5TGZ0 78 aa10.46□□□□□ -0.73
CDT1-201ENST00000301019 HIST2H2BDQ6DRA6 164 aa10.46□□□□□ -0.73
CDT1-201ENST00000301019 POLQO75417 2590 aa10.46□□□□□ -0.74
CDT1-201ENST00000301019 RPL28P46779 137 aaKnown RBP10.46□□□□□ -0.74
CDT1-201ENST00000301019 ADORA2A-AS1P86434 159 aa10.46□□□□□ -0.74
CDT1-201ENST00000301019 MRPL53Q96EL3 112 aaKnown RBP10.46□□□□□ -0.74
CDT1-201ENST00000301019 USP9XQ93008 2570 aaPredicted RBP10.46□□□□□ -0.74
CDT1-201ENST00000301019 NBEAL2Q6ZNJ1 2754 aa10.45□□□□□ -0.74
CDT1-201ENST00000301019 ZANQ9Y493 2812 aa10.45□□□□□ -0.74
CDT1-201ENST00000301019 INAFM2P0DMQ5 153 aa10.45□□□□□ -0.74
CDT1-201ENST00000301019 IGHV3OR16-12A0A075B7B8 117 aa10.45□□□□□ -0.74
CDT1-201ENST00000301019 RPS28P62857 69 aaKnown RBP10.45□□□□□ -0.74
CDT1-201ENST00000301019 BRK1Q8WUW1 75 aa10.45□□□□□ -0.74
CDT1-201ENST00000301019 FAM236DA0A1B0GTK5 79 aa10.44□□□□□ -0.74
CDT1-201ENST00000301019 FAM236CP0DP71 79 aa10.44□□□□□ -0.74
CDT1-201ENST00000301019 ODF3BA8MYP8 253 aa10.44□□□□□ -0.74
CDT1-201ENST00000301019 IGHV3-53P01767 116 aa10.44□□□□□ -0.74
CDT1-201ENST00000301019 CDSNQ15517 529 aa10.44□□□□□ -0.74
CDT1-201ENST00000301019 UPK3BQ9BT76 320 aa10.44□□□□□ -0.74
CDT1-201ENST00000301019 LENEPQ9Y5L5 61 aa10.44□□□□□ -0.74
CDT1-201ENST00000301019 ZFYVE26Q68DK2 2539 aa10.44□□□□□ -0.74
CDT1-201ENST00000301019 SOCS3O14543 225 aa10.43□□□□□ -0.74
CDT1-201ENST00000301019 Q8N6K4 173 aa10.43□□□□□ -0.74
CDT1-201ENST00000301019 WIPF1O43516 503 aa10.43□□□□□ -0.74
CDT1-201ENST00000301019 FBXL19-AS1Q494R0 122 aa10.43□□□□□ -0.74
CDT1-201ENST00000301019 LINC00474Q9P2X8 69 aa10.43□□□□□ -0.74
CDT1-201ENST00000301019 U3KQE9 123 aa10.43□□□□□ -0.74
CDT1-201ENST00000301019 RPL36AP83881 106 aaKnown RBP10.43□□□□□ -0.74
CDT1-201ENST00000301019 CFHR3Q02985 330 aa10.43□□□□□ -0.74
CDT1-201ENST00000301019 BEAN1Q3B7T3 259 aa10.43□□□□□ -0.74
CDT1-201ENST00000301019 RPL36ALQ969Q0 106 aaKnown RBP10.43□□□□□ -0.74
CDT1-201ENST00000301019 USP24Q9UPU5 2620 aa10.42□□□□□ -0.74
CDT1-201ENST00000301019 TRBV6-5A0A0K0K1A5 114 aa10.42□□□□□ -0.74
CDT1-201ENST00000301019 LINC00337Q8N6G1 96 aa10.42□□□□□ -0.74
CDT1-201ENST00000301019 FBN2P35556 2912 aa10.41□□□□□ -0.74
CDT1-201ENST00000301019 CRPP02741 224 aa10.41□□□□□ -0.74
CDT1-201ENST00000301019 IGHV1OR15-1A0A075B7D0 117 aa10.41□□□□□ -0.74
CDT1-201ENST00000301019 BLCAPP62952 87 aa10.41□□□□□ -0.74
CDT1-201ENST00000301019 LINC01600Q96MT4 127 aa10.41□□□□□ -0.74
CDT1-201ENST00000301019 UBE2D4Q9Y2X8 147 aa10.41□□□□□ -0.74
CDT1-201ENST00000301019 KLLNB2CW77 178 aa10.41□□□□□ -0.74
CDT1-201ENST00000301019 LINC00158P58513 81 aa10.41□□□□□ -0.74
CDT1-201ENST00000301019 C10orf99Q6UWK7 81 aa10.41□□□□□ -0.74
CDT1-201ENST00000301019 MIR7-3HGQ8N6C7 128 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms