RNA–Protein interactions for RNA: ENST00000300227.12

CCDC178-201, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC178, Length 3,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-201ENST00000300227 C11orf86A6NJI1 115 aa9.67□□□□□ -0.86
CCDC178-201ENST00000300227 TEX48A0A1B0GUV7 120 aa9.66□□□□□ -0.86
CCDC178-201ENST00000300227 NANOS2P60321 138 aaKnown RBP9.66□□□□□ -0.86
CCDC178-201ENST00000300227 PAPPA-AS1Q5QFB9 102 aa9.66□□□□□ -0.86
CCDC178-201ENST00000300227 GTSF1LQ9H1H1 148 aa9.66□□□□□ -0.86
CCDC178-201ENST00000300227 IGLV4-69A0A075B6H9 119 aa9.66□□□□□ -0.86
CCDC178-201ENST00000300227 IGKV2D-26A0A0A0MRZ7 120 aa9.65□□□□□ -0.86
CCDC178-201ENST00000300227 A0A0J9YXV3 536 aa9.65□□□□□ -0.86
CCDC178-201ENST00000300227 TTTY13Q9BZ97 58 aa9.65□□□□□ -0.86
CCDC178-201ENST00000300227 TMEM170BQ5T4T1 132 aa9.65□□□□□ -0.86
CCDC178-201ENST00000300227 C11orf68Q9H3H3 251 aaKnown RBP9.65□□□□□ -0.86
CCDC178-201ENST00000300227 C11orf45Q8TAV5 145 aa9.64□□□□□ -0.87
CCDC178-201ENST00000300227 DNHD1Q96M86 4753 aa9.64□□□□□ -0.87
CCDC178-201ENST00000300227 DEFA6Q01524 100 aa9.64□□□□□ -0.87
CCDC178-201ENST00000300227 PCP2Q8IVA1 136 aa9.64□□□□□ -0.87
CCDC178-201ENST00000300227 TM2D3Q9BRN9 247 aa9.64□□□□□ -0.87
CCDC178-201ENST00000300227 CHAC1Q9BUX1 264 aa9.64□□□□□ -0.87
CCDC178-201ENST00000300227 HNRNPA3P51991 378 aaKnown RBP9.64□□□□□ -0.87
CCDC178-201ENST00000300227 SLC25A34Q6PIV7 304 aa9.64□□□□□ -0.87
CCDC178-201ENST00000300227 OR5A1Q8NGJ0 315 aa9.64□□□□□ -0.87
CCDC178-201ENST00000300227 TMEM262E9PQX1 116 aa9.63□□□□□ -0.87
CCDC178-201ENST00000300227 AMELXQ99217 191 aa9.63□□□□□ -0.87
CCDC178-201ENST00000300227 TRAV8-6A0A0B4J262 113 aa9.62□□□□□ -0.87
CCDC178-201ENST00000300227 IGKV3OR2-268A0A0C4DH90 116 aa9.62□□□□□ -0.87
CCDC178-201ENST00000300227 CTAG1AP78358 180 aa9.62□□□□□ -0.87
CCDC178-201ENST00000300227 COX8AP10176 69 aa9.62□□□□□ -0.87
CCDC178-201ENST00000300227 MRPL23Q16540 153 aaKnown RBP9.62□□□□□ -0.87
CCDC178-201ENST00000300227 C2orf88Q9BSF0 95 aa9.62□□□□□ -0.87
CCDC178-201ENST00000300227 TRAV13-1A0A0B4J241 112 aa9.62□□□□□ -0.87
CCDC178-201ENST00000300227 TMEM101Q96IK0 257 aa9.62□□□□□ -0.87
CCDC178-201ENST00000300227 TIMM21Q9BVV7 248 aa9.62□□□□□ -0.87
CCDC178-201ENST00000300227 ICOSQ9Y6W8 199 aa9.61□□□□□ -0.87
CCDC178-201ENST00000300227 MRPL52Q86TS9 123 aaKnown RBP9.61□□□□□ -0.87
CCDC178-201ENST00000300227 IGHV3-64A0A075B6Q5 118 aa9.6□□□□□ -0.87
CCDC178-201ENST00000300227 TMEM97Q5BJF2 176 aa9.6□□□□□ -0.87
CCDC178-201ENST00000300227 IGLV4-60A0A075B6I1 120 aa9.6□□□□□ -0.87
CCDC178-201ENST00000300227 MRPS36P82909 103 aaKnown RBP9.6□□□□□ -0.87
CCDC178-201ENST00000300227 CDC42SE2Q9NRR3 84 aa9.6□□□□□ -0.87
CCDC178-201ENST00000300227 DEFB131BA0A096LNP1 70 aa9.59□□□□□ -0.87
CCDC178-201ENST00000300227 SMAGPQ0VAQ4 97 aa9.59□□□□□ -0.87
CCDC178-201ENST00000300227 NPSP0C0P6 89 aa9.59□□□□□ -0.87
CCDC178-201ENST00000300227 BATFQ16520 125 aa9.59□□□□□ -0.87
CCDC178-201ENST00000300227 NFE4Q86UQ8 179 aa9.59□□□□□ -0.87
CCDC178-201ENST00000300227 CSDC2Q9Y534 153 aaKnown RBP9.59□□□□□ -0.87
CCDC178-201ENST00000300227 ZNF22P17026 224 aaPredicted RBP9.58□□□□□ -0.88
CCDC178-201ENST00000300227 GEMIN7Q9H840 131 aaKnown RBP9.58□□□□□ -0.88
CCDC178-201ENST00000300227 UBE2D1P51668 147 aa9.57□□□□□ -0.88
CCDC178-201ENST00000300227 HERVK_113P61574 105 aa9.57□□□□□ -0.88
CCDC178-201ENST00000300227 MPV17L2Q567V2 206 aa9.57□□□□□ -0.88
CCDC178-201ENST00000300227 LINC00469Q8N7U9 141 aa9.57□□□□□ -0.88
CCDC178-201ENST00000300227 H7C423 109 aa9.57□□□□□ -0.88
CCDC178-201ENST00000300227 BOD1L2Q8IYS8 172 aa9.57□□□□□ -0.88
CCDC178-201ENST00000300227 Q8N3U1 123 aa9.57□□□□□ -0.88
CCDC178-201ENST00000300227 MAPKAPK5-AS1Q8N8E1 139 aa9.57□□□□□ -0.88
CCDC178-201ENST00000300227 HUWE1Q7Z6Z7 4374 aaKnown RBP9.57□□□□□ -0.88
CCDC178-201ENST00000300227 E9PLD3 99 aa9.56□□□□□ -0.88
CCDC178-201ENST00000300227 RBX1P62877 108 aa9.56□□□□□ -0.88
CCDC178-201ENST00000300227 CLPSL2Q6UWE3 100 aa9.56□□□□□ -0.88
CCDC178-201ENST00000300227 STAB2Q8WWQ8 2551 aa9.56□□□□□ -0.88
CCDC178-201ENST00000300227 ZNF25P17030 456 aaPredicted RBP9.56□□□□□ -0.88
CCDC178-201ENST00000300227 EREGO14944 169 aa9.55□□□□□ -0.88
CCDC178-201ENST00000300227 COX6A2Q02221 97 aa9.55□□□□□ -0.88
CCDC178-201ENST00000300227 CDKN2A-AS1Q9UH64 79 aa9.55□□□□□ -0.88
CCDC178-201ENST00000300227 TRAV8-3A0A0A6YYJ7 113 aa9.54□□□□□ -0.88
CCDC178-201ENST00000300227 TINCRA0A1B0GVN0 87 aa9.54□□□□□ -0.88
CCDC178-201ENST00000300227 HINT1P49773 126 aaPredicted RBP9.54□□□□□ -0.88
CCDC178-201ENST00000300227 LINC00242Q5T6M2 205 aa9.54□□□□□ -0.88
CCDC178-201ENST00000300227 C2orf91Q6ZV80 131 aa9.54□□□□□ -0.88
CCDC178-201ENST00000300227 SNHG12Q9BXW3 62 aa9.54□□□□□ -0.88
CCDC178-201ENST00000300227 SPINK8P0C7L1 97 aa9.54□□□□□ -0.88
CCDC178-201ENST00000300227 SH2D6Q7Z4S9 175 aa9.54□□□□□ -0.88
CCDC178-201ENST00000300227 TMEM223A0PJW6 202 aa9.54□□□□□ -0.88
CCDC178-201ENST00000300227 LYPD5Q6UWN5 251 aa9.54□□□□□ -0.88
CCDC178-201ENST00000300227 MRPS16Q9Y3D3 137 aaKnown RBP9.54□□□□□ -0.88
CCDC178-201ENST00000300227 TSPEAR-AS2P59090 65 aa9.53□□□□□ -0.88
CCDC178-201ENST00000300227 M0R143 59 aa9.53□□□□□ -0.88
CCDC178-201ENST00000300227 B9D2Q9BPU9 175 aa9.53□□□□□ -0.88
CCDC178-201ENST00000300227 ZNF815PA8K554 130 aa9.52□□□□□ -0.88
CCDC178-201ENST00000300227 LELP1Q5T871 98 aa9.52□□□□□ -0.88
CCDC178-201ENST00000300227 ANGP03950 147 aaKnown RBP9.52□□□□□ -0.89
CCDC178-201ENST00000300227 TRAV10A0A0B4J240 114 aa9.51□□□□□ -0.89
CCDC178-201ENST00000300227 J3QQQ9 107 aa9.51□□□□□ -0.89
CCDC178-201ENST00000300227 DLEU1O43261 78 aa9.51□□□□□ -0.89
CCDC178-201ENST00000300227 HERVK_113P63121 156 aa9.51□□□□□ -0.89
CCDC178-201ENST00000300227 MYMXA0A1B0GTQ4 84 aa9.51□□□□□ -0.89
CCDC178-201ENST00000300227 H3BNG1 76 aa9.51□□□□□ -0.89
CCDC178-201ENST00000300227 LGALS3P17931 250 aaKnown RBP9.51□□□□□ -0.89
CCDC178-201ENST00000300227 LINC00269Q8N2A0 174 aa9.51□□□□□ -0.89
CCDC178-201ENST00000300227 TIRAPP58753 221 aa9.5□□□□□ -0.89
CCDC178-201ENST00000300227 A0A1B0GUV1 79 aa9.5□□□□□ -0.89
CCDC178-201ENST00000300227 SEC11AP67812 179 aa9.5□□□□□ -0.89
CCDC178-201ENST00000300227 SCGB1D4Q6XE38 83 aa9.5□□□□□ -0.89
CCDC178-201ENST00000300227 COL7A1Q02388 2944 aa9.5□□□□□ -0.89
CCDC178-201ENST00000300227 IGHV3-30-3P0DP02 117 aa9.5□□□□□ -0.89
CCDC178-201ENST00000300227 H3BRM9 83 aa9.49□□□□□ -0.89
CCDC178-201ENST00000300227 IGHV3-30P01768 117 aa9.49□□□□□ -0.89
CCDC178-201ENST00000300227 IGHV3-33P01772 117 aa9.49□□□□□ -0.89
CCDC178-201ENST00000300227 IGHV3-30-5P0DP03 117 aa9.49□□□□□ -0.89
CCDC178-201ENST00000300227 ESRGQ1W209 222 aa9.49□□□□□ -0.89
CCDC178-201ENST00000300227 DNAH9Q9NYC9 4486 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms