RNA–Protein interactions for RNA: ENST00000299840.10

VWA3A-201, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,513 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-201ENST00000299840 C9orf66Q5T8R8 295 aa8□□□□□ -1.13
VWA3A-201ENST00000299840 PVRIGQ6DKI7 326 aa8□□□□□ -1.13
VWA3A-201ENST00000299840 COPS9Q8WXC6 57 aa8□□□□□ -1.13
VWA3A-201ENST00000299840 U3KQK5 164 aa8□□□□□ -1.13
VWA3A-201ENST00000299840 DNAH3Q8TD57 4116 aa8□□□□□ -1.13
VWA3A-201ENST00000299840 A0A0B4J2C4 111 aa8□□□□□ -1.13
VWA3A-201ENST00000299840 SLURP1P55000 103 aa8□□□□□ -1.13
VWA3A-201ENST00000299840 ERCC8Q13216 396 aa8□□□□□ -1.13
VWA3A-201ENST00000299840 CIRBPQ14011 172 aaKnown RBP8□□□□□ -1.13
VWA3A-201ENST00000299840 SDIM1Q6ZPB5 146 aa8□□□□□ -1.13
VWA3A-201ENST00000299840 ORMDL3Q8N138 153 aa8□□□□□ -1.13
VWA3A-201ENST00000299840 EEF1AKMT3Q96AZ1 226 aa8□□□□□ -1.13
VWA3A-201ENST00000299840 H7C423 109 aa7.99□□□□□ -1.13
VWA3A-201ENST00000299840 HOXD3P31249 432 aaPredicted RBP7.99□□□□□ -1.13
VWA3A-201ENST00000299840 SNRPD3P62318 126 aaKnown RBP7.99□□□□□ -1.13
VWA3A-201ENST00000299840 ERHP84090 104 aaKnown RBP7.99□□□□□ -1.13
VWA3A-201ENST00000299840 SPINK9Q5DT21 86 aa7.99□□□□□ -1.13
VWA3A-201ENST00000299840 LINC00322Q6ZN03 302 aaPredicted RBP7.99□□□□□ -1.13
VWA3A-201ENST00000299840 LINC00305Q7Z4B0 112 aa7.99□□□□□ -1.13
VWA3A-201ENST00000299840 RNASE2P10153 161 aaKnown RBP7.99□□□□□ -1.13
VWA3A-201ENST00000299840 PLNP26678 52 aa7.99□□□□□ -1.13
VWA3A-201ENST00000299840 TRBV12-3P01733 135 aa7.98□□□□□ -1.13
VWA3A-201ENST00000299840 FMC1Q96HJ9 113 aa7.98□□□□□ -1.13
VWA3A-201ENST00000299840 CCDC140Q96MF4 163 aa7.98□□□□□ -1.13
VWA3A-201ENST00000299840 LAMTOR3Q9UHA4 124 aa7.98□□□□□ -1.13
VWA3A-201ENST00000299840 SORL1Q92673 2214 aa7.98□□□□□ -1.13
VWA3A-201ENST00000299840 IGHV3-33P01772 117 aa7.98□□□□□ -1.13
VWA3A-201ENST00000299840 ARMS2P0C7Q2 107 aa7.98□□□□□ -1.13
VWA3A-201ENST00000299840 MRPS36P82909 103 aaKnown RBP7.98□□□□□ -1.13
VWA3A-201ENST00000299840 SLC50A1Q9BRV3 221 aa7.98□□□□□ -1.13
VWA3A-201ENST00000299840 ZNF815PA8K554 130 aa7.97□□□□□ -1.13
VWA3A-201ENST00000299840 K7EIM0 57 aa7.97□□□□□ -1.13
VWA3A-201ENST00000299840 PRR20EP86478 221 aa7.97□□□□□ -1.13
VWA3A-201ENST00000299840 PRR20CP86479 221 aa7.97□□□□□ -1.13
VWA3A-201ENST00000299840 PRR20DP86480 221 aa7.97□□□□□ -1.13
VWA3A-201ENST00000299840 PRR20BP86481 221 aa7.97□□□□□ -1.13
VWA3A-201ENST00000299840 PRR20AP86496 221 aa7.97□□□□□ -1.13
VWA3A-201ENST00000299840 RHOHQ15669 191 aa7.97□□□□□ -1.13
VWA3A-201ENST00000299840 GPHB5Q86YW7 130 aa7.97□□□□□ -1.13
VWA3A-201ENST00000299840 I3L2K1 104 aa7.96□□□□□ -1.13
VWA3A-201ENST00000299840 SUB1P53999 127 aaKnown RBP eCLIP7.96□□□□□ -1.13
VWA3A-201ENST00000299840 CLEC19AQ6UXS0 136 aa7.96□□□□□ -1.13
VWA3A-201ENST00000299840 LINC00474Q9P2X8 69 aa7.96□□□□□ -1.13
VWA3A-201ENST00000299840 MEGF8Q7Z7M0 2845 aa7.96□□□□□ -1.13
VWA3A-201ENST00000299840 TIMM17BO60830 172 aa7.96□□□□□ -1.14
VWA3A-201ENST00000299840 KRTAP10-11P60412 298 aa7.96□□□□□ -1.14
VWA3A-201ENST00000299840 F8W735 103 aaPredicted RBP7.95□□□□□ -1.14
VWA3A-201ENST00000299840 APOC4P55056 127 aa7.95□□□□□ -1.14
VWA3A-201ENST00000299840 C2orf83Q53S99 150 aa7.95□□□□□ -1.14
VWA3A-201ENST00000299840 RBM12B-AS1Q9P1G2 102 aa7.95□□□□□ -1.14
VWA3A-201ENST00000299840 H7C2G1 150 aa7.94□□□□□ -1.14
VWA3A-201ENST00000299840 IGHV3-23P01764 117 aa7.94□□□□□ -1.14
VWA3A-201ENST00000299840 IGHV3-30P01768 117 aa7.94□□□□□ -1.14
VWA3A-201ENST00000299840 IGHV3-30-5P0DP03 117 aa7.94□□□□□ -1.14
VWA3A-201ENST00000299840 Q1RN00 199 aa7.94□□□□□ -1.14
VWA3A-201ENST00000299840 S4R3C0 116 aa7.94□□□□□ -1.14
VWA3A-201ENST00000299840 LINC01546A6NGU7 62 aa7.94□□□□□ -1.14
VWA3A-201ENST00000299840 GATA1P15976 413 aaPredicted RBP7.94□□□□□ -1.14
VWA3A-201ENST00000299840 PLAC8L1A1L4L8 177 aa7.93□□□□□ -1.14
VWA3A-201ENST00000299840 SPRY2O43597 315 aa7.93□□□□□ -1.14
VWA3A-201ENST00000299840 IGLV1-51P01701 117 aa7.93□□□□□ -1.14
VWA3A-201ENST00000299840 TRBV7-6A0A0J9YX20 115 aa7.93□□□□□ -1.14
VWA3A-201ENST00000299840 TRBV30A0A0K0K1B3 111 aa7.93□□□□□ -1.14
VWA3A-201ENST00000299840 USP17L23D6RBM5 183 aa7.93□□□□□ -1.14
VWA3A-201ENST00000299840 TMEM263Q8WUH6 116 aaKnown RBP7.93□□□□□ -1.14
VWA3A-201ENST00000299840 CTSGP08311 255 aa7.92□□□□□ -1.14
VWA3A-201ENST00000299840 CKS2P33552 79 aa7.92□□□□□ -1.14
VWA3A-201ENST00000299840 NDUFA4O00483 81 aa7.92□□□□□ -1.14
VWA3A-201ENST00000299840 MRPL51Q4U2R6 128 aaKnown RBP7.92□□□□□ -1.14
VWA3A-201ENST00000299840 IGHV3-21A0A0B4J1V1 117 aa7.91□□□□□ -1.14
VWA3A-201ENST00000299840 A0A0J9YY99 117 aa7.91□□□□□ -1.14
VWA3A-201ENST00000299840 PAXXQ9BUH6 204 aa7.91□□□□□ -1.14
VWA3A-201ENST00000299840 F8VRH5 84 aa7.91□□□□□ -1.14
VWA3A-201ENST00000299840 K7EIL1 84 aa7.91□□□□□ -1.14
VWA3A-201ENST00000299840 K7EMT4 169 aa7.91□□□□□ -1.14
VWA3A-201ENST00000299840 CCKP06307 115 aa7.91□□□□□ -1.14
VWA3A-201ENST00000299840 LYPD5Q6UWN5 251 aa7.91□□□□□ -1.14
VWA3A-201ENST00000299840 TMEM190Q8WZ59 177 aa7.91□□□□□ -1.14
VWA3A-201ENST00000299840 BUB3O43684 328 aa7.9□□□□□ -1.15
VWA3A-201ENST00000299840 PRB2P02812 416 aaPredicted RBP7.9□□□□□ -1.15
VWA3A-201ENST00000299840 XCL1P47992 114 aa7.9□□□□□ -1.15
VWA3A-201ENST00000299840 Q9H3A6 140 aa7.9□□□□□ -1.15
VWA3A-201ENST00000299840 XCL2Q9UBD3 114 aa7.9□□□□□ -1.15
VWA3A-201ENST00000299840 RBMY1BA6NDE4 496 aaKnown RBP7.89□□□□□ -1.15
VWA3A-201ENST00000299840 RBMY1EA6NEQ0 496 aaKnown RBP7.89□□□□□ -1.15
VWA3A-201ENST00000299840 H7BZZ5 65 aa7.89□□□□□ -1.15
VWA3A-201ENST00000299840 RBMY1DP0C7P1 496 aaKnown RBP7.89□□□□□ -1.15
VWA3A-201ENST00000299840 RBMY1A1P0DJD3 496 aaKnown RBP7.89□□□□□ -1.15
VWA3A-201ENST00000299840 RBMY1CP0DJD4 496 aa7.89□□□□□ -1.15
VWA3A-201ENST00000299840 RBM3P98179 157 aaKnown RBP7.89□□□□□ -1.15
VWA3A-201ENST00000299840 RBMY1FQ15415 496 aaKnown RBP7.89□□□□□ -1.15
VWA3A-201ENST00000299840 UNQ9165/PRO28630Q6UXU0 137 aa7.89□□□□□ -1.15
VWA3A-201ENST00000299840 DCANP1Q8TF63 244 aa7.89□□□□□ -1.15
VWA3A-201ENST00000299840 FAM167A-AS1Q96KT0 104 aa7.89□□□□□ -1.15
VWA3A-201ENST00000299840 PRKDCP78527 4128 aaKnown RBP7.89□□□□□ -1.15
VWA3A-201ENST00000299840 SMKR1H3BMG3 65 aa7.89□□□□□ -1.15
VWA3A-201ENST00000299840 TRIAP1O43715 76 aa7.89□□□□□ -1.15
VWA3A-201ENST00000299840 DEFB114Q30KQ6 69 aa7.89□□□□□ -1.15
VWA3A-201ENST00000299840 MRPL36Q9P0J6 103 aaKnown RBP7.89□□□□□ -1.15
VWA3A-201ENST00000299840 PRSS2P07478 247 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms