RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 Q6ZSN1 163 aa9.77□□□□□ -0.85
RPUSD4-201ENST00000298317 K7ENP7 123 aa9.76□□□□□ -0.85
RPUSD4-201ENST00000298317 COX6A2Q02221 97 aa9.76□□□□□ -0.85
RPUSD4-201ENST00000298317 NACAE9PAV3 2078 aa9.75□□□□□ -0.85
RPUSD4-201ENST00000298317 H3BUX3 64 aa9.75□□□□□ -0.85
RPUSD4-201ENST00000298317 ZNF625Q96I27 306 aaPredicted RBP9.75□□□□□ -0.85
RPUSD4-201ENST00000298317 UPK3BQ9BT76 320 aa9.75□□□□□ -0.85
RPUSD4-201ENST00000298317 TRAV13-1A0A0B4J241 112 aa9.74□□□□□ -0.85
RPUSD4-201ENST00000298317 A0A0U1RRA0 63 aa9.74□□□□□ -0.85
RPUSD4-201ENST00000298317 KNCNA6PVL3 124 aa9.74□□□□□ -0.85
RPUSD4-201ENST00000298317 PIK3CD-AS1Q5SR53 167 aa9.74□□□□□ -0.85
RPUSD4-201ENST00000298317 SPTBN1Q01082 2364 aaKnown RBP9.74□□□□□ -0.85
RPUSD4-201ENST00000298317 DOPEY2Q9Y3R5 2298 aa9.74□□□□□ -0.85
RPUSD4-201ENST00000298317 IGHV3OR16-12A0A075B7B8 117 aa9.74□□□□□ -0.85
RPUSD4-201ENST00000298317 LINC00242Q5T6M2 205 aa9.73□□□□□ -0.85
RPUSD4-201ENST00000298317 IGHV3-38A0A0C4DH36 116 aa9.73□□□□□ -0.85
RPUSD4-201ENST00000298317 SMIM1B2RUZ4 78 aa9.73□□□□□ -0.85
RPUSD4-201ENST00000298317 FAM19A3Q7Z5A8 133 aa9.73□□□□□ -0.85
RPUSD4-201ENST00000298317 ZNF415Q09FC8 603 aa9.72□□□□□ -0.85
RPUSD4-201ENST00000298317 TLN1Q9Y490 2541 aaKnown RBP9.72□□□□□ -0.85
RPUSD4-201ENST00000298317 IGHV4-38-2P0DP08 117 aa9.72□□□□□ -0.85
RPUSD4-201ENST00000298317 HTN1P15515 57 aa9.72□□□□□ -0.85
RPUSD4-201ENST00000298317 IGHV3-53P01767 116 aa9.71□□□□□ -0.85
RPUSD4-201ENST00000298317 PSMB8P28062 276 aa9.71□□□□□ -0.85
RPUSD4-201ENST00000298317 RPL18AQ02543 176 aaKnown RBP9.71□□□□□ -0.85
RPUSD4-201ENST00000298317 HIST2H2BCQ6DN03 193 aa9.71□□□□□ -0.85
RPUSD4-201ENST00000298317 HIST2H2BDQ6DRA6 164 aa9.71□□□□□ -0.85
RPUSD4-201ENST00000298317 C1orf43Q9BWL3 253 aa9.71□□□□□ -0.85
RPUSD4-201ENST00000298317 RPL28P46779 137 aaKnown RBP9.71□□□□□ -0.86
RPUSD4-201ENST00000298317 PRIMA1Q86XR5 153 aa9.71□□□□□ -0.86
RPUSD4-201ENST00000298317 Q9HAA7 133 aa9.71□□□□□ -0.86
RPUSD4-201ENST00000298317 ABCA2Q9BZC7 2435 aa9.7□□□□□ -0.86
RPUSD4-201ENST00000298317 SERP2Q8N6R1 65 aa9.7□□□□□ -0.86
RPUSD4-201ENST00000298317 PF4P02776 101 aa9.7□□□□□ -0.86
RPUSD4-201ENST00000298317 DGAT2L7PQ6IED9 249 aa9.7□□□□□ -0.86
RPUSD4-201ENST00000298317 LINC00336Q6ZUF6 198 aa9.7□□□□□ -0.86
RPUSD4-201ENST00000298317 PRM2P04554 102 aa9.69□□□□□ -0.86
RPUSD4-201ENST00000298317 PFN2P35080 140 aa9.68□□□□□ -0.86
RPUSD4-201ENST00000298317 A8MTW9 85 aa9.68□□□□□ -0.86
RPUSD4-201ENST00000298317 DNAL4O96015 105 aa9.68□□□□□ -0.86
RPUSD4-201ENST00000298317 RPL35AP18077 110 aaKnown RBP9.68□□□□□ -0.86
RPUSD4-201ENST00000298317 SEC61GP60059 68 aa9.68□□□□□ -0.86
RPUSD4-201ENST00000298317 Q6JHZ5 121 aa9.68□□□□□ -0.86
RPUSD4-201ENST00000298317 C10orf105Q8TEF2 133 aa9.68□□□□□ -0.86
RPUSD4-201ENST00000298317 PTPRZ1P23471 2315 aaPredicted RBP9.68□□□□□ -0.86
RPUSD4-201ENST00000298317 TRAV13-2A0A0B4J235 113 aa9.67□□□□□ -0.86
RPUSD4-201ENST00000298317 OVOL2Q9BRP0 275 aa9.67□□□□□ -0.86
RPUSD4-201ENST00000298317 COL6A6A6NMZ7 2263 aa9.67□□□□□ -0.86
RPUSD4-201ENST00000298317 OBSCN-AS1Q96MR7 158 aa9.67□□□□□ -0.86
RPUSD4-201ENST00000298317 ZNF292O60281 2723 aa9.67□□□□□ -0.86
RPUSD4-201ENST00000298317 HOXD3P31249 432 aaPredicted RBP9.66□□□□□ -0.86
RPUSD4-201ENST00000298317 C9orf129Q5T035 196 aaKnown RBP9.66□□□□□ -0.86
RPUSD4-201ENST00000298317 RBMY1BA6NDE4 496 aaKnown RBP9.66□□□□□ -0.86
RPUSD4-201ENST00000298317 RBMY1EA6NEQ0 496 aaKnown RBP9.66□□□□□ -0.86
RPUSD4-201ENST00000298317 RBMY1DP0C7P1 496 aaKnown RBP9.66□□□□□ -0.86
RPUSD4-201ENST00000298317 CELSR1Q9NYQ6 3014 aa9.66□□□□□ -0.86
RPUSD4-201ENST00000298317 CRPP02741 224 aa9.65□□□□□ -0.86
RPUSD4-201ENST00000298317 SYNJ2BPP57105 145 aa9.65□□□□□ -0.86
RPUSD4-201ENST00000298317 C10orf99Q6UWK7 81 aa9.65□□□□□ -0.86
RPUSD4-201ENST00000298317 C11orf72Q8NBR9 251 aa9.65□□□□□ -0.86
RPUSD4-201ENST00000298317 KLRB1Q12918 225 aa9.65□□□□□ -0.86
RPUSD4-201ENST00000298317 TMEM86BQ8N661 226 aa9.65□□□□□ -0.86
RPUSD4-201ENST00000298317 LINC00337Q8N6G1 96 aa9.65□□□□□ -0.86
RPUSD4-201ENST00000298317 PKIGQ9Y2B9 76 aa9.65□□□□□ -0.86
RPUSD4-201ENST00000298317 A0A087WYN8 130 aa9.64□□□□□ -0.87
RPUSD4-201ENST00000298317 RS1O15537 224 aa9.64□□□□□ -0.87
RPUSD4-201ENST00000298317 C14orf132Q9NPU4 83 aa9.64□□□□□ -0.87
RPUSD4-201ENST00000298317 LINC00846Q9NV44 126 aa9.64□□□□□ -0.87
RPUSD4-201ENST00000298317 IGKV2-28A0A075B6P5 120 aa9.64□□□□□ -0.87
RPUSD4-201ENST00000298317 IGKV3D-7A0A0C4DH55 119 aa9.64□□□□□ -0.87
RPUSD4-201ENST00000298317 IGKV2D-28P01615 120 aa9.64□□□□□ -0.87
RPUSD4-201ENST00000298317 TMEM89A2RUT3 159 aa9.63□□□□□ -0.87
RPUSD4-201ENST00000298317 IGHV4-61A0A0C4DH41 118 aa9.63□□□□□ -0.87
RPUSD4-201ENST00000298317 DEFB131AP59861 70 aa9.62□□□□□ -0.87
RPUSD4-201ENST00000298317 LINC01561Q8N1V8 128 aa9.62□□□□□ -0.87
RPUSD4-201ENST00000298317 SPTAN1Q13813 2472 aaKnown RBP9.62□□□□□ -0.87
RPUSD4-201ENST00000298317 A0A087WVE0 104 aa9.61□□□□□ -0.87
RPUSD4-201ENST00000298317 NDUFC2-KCTD14E9PQ53 114 aa9.61□□□□□ -0.87
RPUSD4-201ENST00000298317 SMIM11BQ8TCY0 68 aa9.61□□□□□ -0.87
RPUSD4-201ENST00000298317 Q96MF0 132 aa9.61□□□□□ -0.87
RPUSD4-201ENST00000298317 SORL1Q92673 2214 aa9.61□□□□□ -0.87
RPUSD4-201ENST00000298317 CDC42SE2Q9NRR3 84 aa9.61□□□□□ -0.87
RPUSD4-201ENST00000298317 VPS13CQ709C8 3753 aa9.61□□□□□ -0.87
RPUSD4-201ENST00000298317 EPM2AB3EWF7 344 aa9.6□□□□□ -0.87
RPUSD4-201ENST00000298317 USP17L23D6RBM5 183 aa9.6□□□□□ -0.87
RPUSD4-201ENST00000298317 FHL2Q14192 279 aa9.6□□□□□ -0.87
RPUSD4-201ENST00000298317 MIR7-3HGQ8N6C7 128 aa9.6□□□□□ -0.87
RPUSD4-201ENST00000298317 SND1-IT1Q9HBX3 110 aa9.6□□□□□ -0.87
RPUSD4-201ENST00000298317 PTPRQQ9UMZ3 2332 aa9.6□□□□□ -0.87
RPUSD4-201ENST00000298317 H0YGX0 51 aa9.6□□□□□ -0.87
RPUSD4-201ENST00000298317 V9GYY9 64 aa9.6□□□□□ -0.87
RPUSD4-201ENST00000298317 NTM-AS1Q6ZSK4 140 aa9.59□□□□□ -0.87
RPUSD4-201ENST00000298317 SPTA1P02549 2419 aa9.59□□□□□ -0.87
RPUSD4-201ENST00000298317 NDUFC2O95298 119 aa9.58□□□□□ -0.88
RPUSD4-201ENST00000298317 TTC28Q96AY4 2481 aa9.57□□□□□ -0.88
RPUSD4-201ENST00000298317 NBASA2RRP1 2371 aa9.57□□□□□ -0.88
RPUSD4-201ENST00000298317 NCR3O14931 201 aa9.56□□□□□ -0.88
RPUSD4-201ENST00000298317 LECT2O14960 151 aa9.56□□□□□ -0.88
RPUSD4-201ENST00000298317 FAM236DA0A1B0GTK5 79 aa9.56□□□□□ -0.88
RPUSD4-201ENST00000298317 FAM236CP0DP71 79 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms