RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 LENEPQ9Y5L5 61 aa4.89□□□□□ -1.63
TMC1-201ENST00000297784 TEX49A0A1B0GTD5 131 aa4.89□□□□□ -1.63
TMC1-201ENST00000297784 DEFB1P60022 68 aa4.89□□□□□ -1.63
TMC1-201ENST00000297784 J3QQQ9 107 aa4.89□□□□□ -1.63
TMC1-201ENST00000297784 ZNF876PQ49A33 203 aa4.89□□□□□ -1.63
TMC1-201ENST00000297784 TMEM170BQ5T4T1 132 aa4.89□□□□□ -1.63
TMC1-201ENST00000297784 IGKV3-7A0A075B6H7 116 aa4.88□□□□□ -1.63
TMC1-201ENST00000297784 LEPROTO15243 131 aa4.88□□□□□ -1.63
TMC1-201ENST00000297784 C5orf47Q569G3 176 aa4.88□□□□□ -1.63
TMC1-201ENST00000297784 COL6A5A8TX70 2615 aa4.88□□□□□ -1.63
TMC1-201ENST00000297784 SDHAF1A6NFY7 115 aa4.88□□□□□ -1.63
TMC1-201ENST00000297784 LGALS3P17931 250 aaKnown RBP4.88□□□□□ -1.63
TMC1-201ENST00000297784 NSUN5P1Q3KNT7 163 aa4.88□□□□□ -1.63
TMC1-201ENST00000297784 KRTAP24-1Q3LI83 254 aa4.88□□□□□ -1.63
TMC1-201ENST00000297784 RPL39LQ96EH5 51 aaKnown RBP4.88□□□□□ -1.63
TMC1-201ENST00000297784 CSDC2Q9Y534 153 aaKnown RBP4.88□□□□□ -1.63
TMC1-201ENST00000297784 A0A1B0GX51 115 aa4.87□□□□□ -1.63
TMC1-201ENST00000297784 ATP5G1P05496 136 aa4.87□□□□□ -1.63
TMC1-201ENST00000297784 ID1P41134 155 aa4.87□□□□□ -1.63
TMC1-201ENST00000297784 C2orf82Q6UX34 121 aa4.87□□□□□ -1.63
TMC1-201ENST00000297784 TMEM101Q96IK0 257 aa4.87□□□□□ -1.63
TMC1-201ENST00000297784 H7C423 109 aa4.87□□□□□ -1.63
TMC1-201ENST00000297784 ACYP1P07311 99 aa4.87□□□□□ -1.63
TMC1-201ENST00000297784 RPL11P62913 178 aaKnown RBP4.87□□□□□ -1.63
TMC1-201ENST00000297784 CHCHD5Q9BSY4 110 aa4.87□□□□□ -1.63
TMC1-201ENST00000297784 TRIAP1O43715 76 aa4.87□□□□□ -1.63
TMC1-201ENST00000297784 NXPH4O95158 308 aa4.87□□□□□ -1.63
TMC1-201ENST00000297784 DEFB114Q30KQ6 69 aa4.87□□□□□ -1.63
TMC1-201ENST00000297784 MUSTN1Q8IVN3 82 aa4.87□□□□□ -1.63
TMC1-201ENST00000297784 C3orf22Q8N5N4 141 aa4.87□□□□□ -1.63
TMC1-201ENST00000297784 ZNRF2Q8NHG8 242 aa4.87□□□□□ -1.63
TMC1-201ENST00000297784 C16orf92Q96LL3 132 aa4.87□□□□□ -1.63
TMC1-201ENST00000297784 TMEM223A0PJW6 202 aa4.86□□□□□ -1.63
TMC1-201ENST00000297784 F6UB75 175 aa4.86□□□□□ -1.63
TMC1-201ENST00000297784 POLR2KP53803 58 aaKnown RBP4.86□□□□□ -1.63
TMC1-201ENST00000297784 C14orf178Q8N769 122 aaPredicted RBP4.86□□□□□ -1.63
TMC1-201ENST00000297784 TP53TG1Q9Y2A0 90 aa4.86□□□□□ -1.63
TMC1-201ENST00000297784 K7EQG2 157 aa4.86□□□□□ -1.63
TMC1-201ENST00000297784 UQCRQO14949 82 aa4.86□□□□□ -1.63
TMC1-201ENST00000297784 WIPF1O43516 503 aa4.86□□□□□ -1.63
TMC1-201ENST00000297784 ZNF56Q15929 161 aa4.86□□□□□ -1.63
TMC1-201ENST00000297784 TMEM61Q8N0U2 210 aa4.86□□□□□ -1.63
TMC1-201ENST00000297784 SPXQ9BT56 116 aa4.86□□□□□ -1.63
TMC1-201ENST00000297784 ZNF256Q9Y2P7 627 aaPredicted RBP4.86□□□□□ -1.63
TMC1-201ENST00000297784 LINC00526Q96FQ7 95 aa4.85□□□□□ -1.63
TMC1-201ENST00000297784 PEMTQ9UBM1 199 aa4.85□□□□□ -1.63
TMC1-201ENST00000297784 OVOL1O14753 267 aa4.85□□□□□ -1.63
TMC1-201ENST00000297784 RPS28P62857 69 aaKnown RBP4.85□□□□□ -1.63
TMC1-201ENST00000297784 Q1RN00 199 aa4.85□□□□□ -1.63
TMC1-201ENST00000297784 FAM19A4Q96LR4 140 aa4.85□□□□□ -1.63
TMC1-201ENST00000297784 ICOSQ9Y6W8 199 aa4.85□□□□□ -1.63
TMC1-201ENST00000297784 TRAV21A0A0B4J279 112 aa4.85□□□□□ -1.63
TMC1-201ENST00000297784 LST1O00453 97 aa4.85□□□□□ -1.63
TMC1-201ENST00000297784 VCYO14598 125 aa4.85□□□□□ -1.63
TMC1-201ENST00000297784 LINC00694P0DN24 101 aa4.85□□□□□ -1.63
TMC1-201ENST00000297784 PRR9Q5T870 116 aa4.85□□□□□ -1.63
TMC1-201ENST00000297784 LINC00482Q8N8I6 264 aa4.85□□□□□ -1.63
TMC1-201ENST00000297784 KIF25-AS1Q9Y6Z4 181 aa4.85□□□□□ -1.63
TMC1-201ENST00000297784 COX6CP09669 75 aa4.84□□□□□ -1.63
TMC1-201ENST00000297784 LINC00315P59091 139 aa4.84□□□□□ -1.63
TMC1-201ENST00000297784 SDIM1Q6ZPB5 146 aa4.84□□□□□ -1.63
TMC1-201ENST00000297784 LINC00477Q96M19 166 aa4.84□□□□□ -1.63
TMC1-201ENST00000297784 PHLDA3Q9Y5J5 127 aa4.84□□□□□ -1.63
TMC1-201ENST00000297784 TRBV6-5A0A0K0K1A5 114 aa4.84□□□□□ -1.63
TMC1-201ENST00000297784 H7C2G1 150 aa4.84□□□□□ -1.63
TMC1-201ENST00000297784 J3KT08 172 aa4.84□□□□□ -1.63
TMC1-201ENST00000297784 MGPP08493 103 aa4.84□□□□□ -1.63
TMC1-201ENST00000297784 EMP1P54849 157 aa4.84□□□□□ -1.63
TMC1-201ENST00000297784 APRG1Q8IVJ8 170 aa4.84□□□□□ -1.63
TMC1-201ENST00000297784 ZFAND2AQ8N6M9 145 aa4.84□□□□□ -1.63
TMC1-201ENST00000297784 A0A0J9YXY3 114 aa4.84□□□□□ -1.64
TMC1-201ENST00000297784 FAM236AA0A1B0GUQ0 79 aa4.84□□□□□ -1.64
TMC1-201ENST00000297784 FAM236BA0A1B0GV22 79 aa4.84□□□□□ -1.64
TMC1-201ENST00000297784 SMIM9A6NGZ8 99 aa4.84□□□□□ -1.64
TMC1-201ENST00000297784 C9orf153Q5TBE3 101 aa4.84□□□□□ -1.64
TMC1-201ENST00000297784 LITAFQ99732 161 aa4.84□□□□□ -1.64
TMC1-201ENST00000297784 DNHD1Q96M86 4753 aa4.83□□□□□ -1.64
TMC1-201ENST00000297784 TRGV11A0A075B6L2 103 aa4.83□□□□□ -1.64
TMC1-201ENST00000297784 TRBV27A0A0K0K1C4 114 aa4.83□□□□□ -1.64
TMC1-201ENST00000297784 IGLV1-51P01701 117 aa4.83□□□□□ -1.64
TMC1-201ENST00000297784 CXCL5P42830 114 aa4.83□□□□□ -1.64
TMC1-201ENST00000297784 RHOHQ15669 191 aa4.83□□□□□ -1.64
TMC1-201ENST00000297784 LINC00643Q86TS7 51 aa4.83□□□□□ -1.64
TMC1-201ENST00000297784 NOTCH3Q9UM47 2321 aa4.83□□□□□ -1.64
TMC1-201ENST00000297784 ZNF22P17026 224 aaPredicted RBP4.83□□□□□ -1.64
TMC1-201ENST00000297784 S100A4P26447 101 aaKnown RBP4.83□□□□□ -1.64
TMC1-201ENST00000297784 HERVK_113P63121 156 aa4.83□□□□□ -1.64
TMC1-201ENST00000297784 RNASE3P12724 160 aaKnown RBP4.82□□□□□ -1.64
TMC1-201ENST00000297784 RPL39P62891 51 aaKnown RBP4.82□□□□□ -1.64
TMC1-201ENST00000297784 C5orf38Q86SI9 138 aa4.82□□□□□ -1.64
TMC1-201ENST00000297784 CRYGAP11844 174 aa4.82□□□□□ -1.64
TMC1-201ENST00000297784 ODF3L2Q3SX64 289 aa4.82□□□□□ -1.64
TMC1-201ENST00000297784 COX7CP15954 63 aa4.81□□□□□ -1.64
TMC1-201ENST00000297784 SNRPD3P62318 126 aaKnown RBP4.81□□□□□ -1.64
TMC1-201ENST00000297784 SUMO4Q6EEV6 95 aa4.81□□□□□ -1.64
TMC1-201ENST00000297784 C3orf56Q8N813 242 aa4.81□□□□□ -1.64
TMC1-201ENST00000297784 MAP6D1Q9H9H5 199 aa4.81□□□□□ -1.64
TMC1-201ENST00000297784 C19orf73Q9NVV2 129 aa4.81□□□□□ -1.64
TMC1-201ENST00000297784 NBEAL2Q6ZNJ1 2754 aa4.81□□□□□ -1.64
TMC1-201ENST00000297784 RBMY1BA6NDE4 496 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms