RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 MRPL52Q86TS9 123 aaKnown RBP15.94■□□□□ 0.14
PTX3-201ENST00000295927 MRAPQ8TCY5 172 aa15.94■□□□□ 0.14
PTX3-201ENST00000295927 SPATA25Q9BR10 227 aa15.94■□□□□ 0.14
PTX3-201ENST00000295927 COX8AP10176 69 aa15.94■□□□□ 0.14
PTX3-201ENST00000295927 MRPS36P82909 103 aaKnown RBP15.94■□□□□ 0.14
PTX3-201ENST00000295927 DEFA6Q01524 100 aa15.94■□□□□ 0.14
PTX3-201ENST00000295927 TMEM97Q5BJF2 176 aa15.94■□□□□ 0.14
PTX3-201ENST00000295927 SLC25A34Q6PIV7 304 aa15.94■□□□□ 0.14
PTX3-201ENST00000295927 TM2D3Q9BRN9 247 aa15.94■□□□□ 0.14
PTX3-201ENST00000295927 UBE2L6O14933 153 aa15.93■□□□□ 0.14
PTX3-201ENST00000295927 A0A096LPF7 62 aa15.92■□□□□ 0.14
PTX3-201ENST00000295927 IGKV2D-26A0A0A0MRZ7 120 aa15.92■□□□□ 0.14
PTX3-201ENST00000295927 NMUP48645 174 aa15.92■□□□□ 0.14
PTX3-201ENST00000295927 CSDC2Q9Y534 153 aaKnown RBP15.92■□□□□ 0.14
PTX3-201ENST00000295927 H7C423 109 aa15.91■□□□□ 0.14
PTX3-201ENST00000295927 HNRNPA3P51991 378 aaKnown RBP15.91■□□□□ 0.14
PTX3-201ENST00000295927 NFE4Q86UQ8 179 aa15.91■□□□□ 0.14
PTX3-201ENST00000295927 SMAGPQ0VAQ4 97 aa15.9■□□□□ 0.14
PTX3-201ENST00000295927 A0A0J9YXV3 536 aa15.9■□□□□ 0.14
PTX3-201ENST00000295927 AMMECR1LQ6DCA0 310 aa15.9■□□□□ 0.14
PTX3-201ENST00000295927 CHAC1Q9BUX1 264 aa15.9■□□□□ 0.14
PTX3-201ENST00000295927 GAGE6Q13070 117 aa15.89■□□□□ 0.13
PTX3-201ENST00000295927 Q6ZTC4 211 aa15.89■□□□□ 0.13
PTX3-201ENST00000295927 PCP2Q8IVA1 136 aa15.88■□□□□ 0.13
PTX3-201ENST00000295927 OR5A1Q8NGJ0 315 aa15.88■□□□□ 0.13
PTX3-201ENST00000295927 C2orf88Q9BSF0 95 aa15.88■□□□□ 0.13
PTX3-201ENST00000295927 CHCHD5Q9BSY4 110 aa15.88■□□□□ 0.13
PTX3-201ENST00000295927 CTAG1AP78358 180 aa15.87■□□□□ 0.13
PTX3-201ENST00000295927 TMEM170BQ5T4T1 132 aa15.87■□□□□ 0.13
PTX3-201ENST00000295927 BOD1L2Q8IYS8 172 aa15.87■□□□□ 0.13
PTX3-201ENST00000295927 CDC42SE2Q9NRR3 84 aa15.87■□□□□ 0.13
PTX3-201ENST00000295927 MRPL23Q16540 153 aaKnown RBP15.86■□□□□ 0.13
PTX3-201ENST00000295927 TMEM101Q96IK0 257 aa15.86■□□□□ 0.13
PTX3-201ENST00000295927 C11orf45Q8TAV5 145 aa15.86■□□□□ 0.13
PTX3-201ENST00000295927 ICOSQ9Y6W8 199 aa15.86■□□□□ 0.13
PTX3-201ENST00000295927 NANOS2P60321 138 aaKnown RBP15.85■□□□□ 0.13
PTX3-201ENST00000295927 TTTY13Q9BZ97 58 aa15.85■□□□□ 0.13
PTX3-201ENST00000295927 ZNF25P17030 456 aaPredicted RBP15.84■□□□□ 0.13
PTX3-201ENST00000295927 UBE2D1P51668 147 aa15.84■□□□□ 0.13
PTX3-201ENST00000295927 MRPS16Q9Y3D3 137 aaKnown RBP15.84■□□□□ 0.13
PTX3-201ENST00000295927 E9PLD3 99 aa15.84■□□□□ 0.13
PTX3-201ENST00000295927 DLEU1O43261 78 aa15.84■□□□□ 0.13
PTX3-201ENST00000295927 ZNF22P17026 224 aaPredicted RBP15.84■□□□□ 0.13
PTX3-201ENST00000295927 TINCRA0A1B0GVN0 87 aa15.82■□□□□ 0.12
PTX3-201ENST00000295927 HERVK_113P61574 105 aa15.82■□□□□ 0.12
PTX3-201ENST00000295927 TRAV8-6A0A0B4J262 113 aa15.82■□□□□ 0.12
PTX3-201ENST00000295927 C2orf91Q6ZV80 131 aa15.82■□□□□ 0.12
PTX3-201ENST00000295927 SH2D6Q7Z4S9 175 aa15.82■□□□□ 0.12
PTX3-201ENST00000295927 HUWE1Q7Z6Z7 4374 aaKnown RBP15.81■□□□□ 0.12
PTX3-201ENST00000295927 IGLV4-60A0A075B6I1 120 aa15.8■□□□□ 0.12
PTX3-201ENST00000295927 TMEM223A0PJW6 202 aa15.8■□□□□ 0.12
PTX3-201ENST00000295927 H3BNG1 76 aa15.8■□□□□ 0.12
PTX3-201ENST00000295927 MAPKAPK5-AS1Q8N8E1 139 aa15.8■□□□□ 0.12
PTX3-201ENST00000295927 SNHG12Q9BXW3 62 aa15.79■□□□□ 0.12
PTX3-201ENST00000295927 TMEM262E9PQX1 116 aa15.78■□□□□ 0.12
PTX3-201ENST00000295927 TRAV13-1A0A0B4J241 112 aa15.78■□□□□ 0.12
PTX3-201ENST00000295927 M0R143 59 aa15.78■□□□□ 0.12
PTX3-201ENST00000295927 EREGO14944 169 aa15.78■□□□□ 0.12
PTX3-201ENST00000295927 GEMIN7Q9H840 131 aaKnown RBP15.78■□□□□ 0.12
PTX3-201ENST00000295927 DEFB131BA0A096LNP1 70 aa15.77■□□□□ 0.12
PTX3-201ENST00000295927 FAM19A3Q7Z5A8 133 aa15.77■□□□□ 0.12
PTX3-201ENST00000295927 TIRAPP58753 221 aa15.76■□□□□ 0.11
PTX3-201ENST00000295927 LINC00242Q5T6M2 205 aa15.76■□□□□ 0.11
PTX3-201ENST00000295927 SIVA1O15304 175 aa15.76■□□□□ 0.11
PTX3-201ENST00000295927 MPV17L2Q567V2 206 aa15.76■□□□□ 0.11
PTX3-201ENST00000295927 A0A1B0GUV1 79 aa15.75■□□□□ 0.11
PTX3-201ENST00000295927 RBX1P62877 108 aa15.75■□□□□ 0.11
PTX3-201ENST00000295927 COX6A2Q02221 97 aa15.75■□□□□ 0.11
PTX3-201ENST00000295927 LINC00469Q8N7U9 141 aa15.75■□□□□ 0.11
PTX3-201ENST00000295927 LELP1Q5T871 98 aa15.74■□□□□ 0.11
PTX3-201ENST00000295927 IGHV3-64A0A075B6Q5 118 aa15.73■□□□□ 0.11
PTX3-201ENST00000295927 IGLV5-45A0A087WSX0 123 aa15.73■□□□□ 0.11
PTX3-201ENST00000295927 TSPEAR-AS2P59090 65 aa15.73■□□□□ 0.11
PTX3-201ENST00000295927 HERVK_113P63121 156 aa15.73■□□□□ 0.11
PTX3-201ENST00000295927 SEC11AP67812 179 aa15.73■□□□□ 0.11
PTX3-201ENST00000295927 LYPD5Q6UWN5 251 aa15.73■□□□□ 0.11
PTX3-201ENST00000295927 CDKN2A-AS1Q9UH64 79 aa15.73■□□□□ 0.11
PTX3-201ENST00000295927 MYMXA0A1B0GTQ4 84 aa15.72■□□□□ 0.11
PTX3-201ENST00000295927 LEPROTO15243 131 aa15.72■□□□□ 0.11
PTX3-201ENST00000295927 B9D2Q9BPU9 175 aa15.72■□□□□ 0.11
PTX3-201ENST00000295927 HINT1P49773 126 aaPredicted RBP15.72■□□□□ 0.11
PTX3-201ENST00000295927 BATFQ16520 125 aa15.72■□□□□ 0.11
PTX3-201ENST00000295927 IGKV3OR2-268A0A0C4DH90 116 aa15.71■□□□□ 0.11
PTX3-201ENST00000295927 ZNF815PA8K554 130 aa15.7■□□□□ 0.1
PTX3-201ENST00000295927 J3QQQ9 107 aa15.7■□□□□ 0.1
PTX3-201ENST00000295927 TRAV8-3A0A0A6YYJ7 113 aa15.7■□□□□ 0.1
PTX3-201ENST00000295927 SPINK8P0C7L1 97 aa15.7■□□□□ 0.1
PTX3-201ENST00000295927 HIGD1BQ9P298 99 aa15.7■□□□□ 0.1
PTX3-201ENST00000295927 TRAV10A0A0B4J240 114 aa15.69■□□□□ 0.1
PTX3-201ENST00000295927 DNAH9Q9NYC9 4486 aa15.69■□□□□ 0.1
PTX3-201ENST00000295927 H3BRM9 83 aa15.68■□□□□ 0.1
PTX3-201ENST00000295927 LGALS3P17931 250 aaKnown RBP15.68■□□□□ 0.1
PTX3-201ENST00000295927 Q8N3U1 123 aa15.68■□□□□ 0.1
PTX3-201ENST00000295927 IGHV1-58A0A0C4DH39 117 aa15.68■□□□□ 0.1
PTX3-201ENST00000295927 IGHV3-30-3P0DP02 117 aa15.68■□□□□ 0.1
PTX3-201ENST00000295927 KRTAP21-3Q3LHN1 58 aa15.68■□□□□ 0.1
PTX3-201ENST00000295927 PLEKHB2Q96CS7 222 aa15.68■□□□□ 0.1
PTX3-201ENST00000295927 DNHD1Q96M86 4753 aa15.66■□□□□ 0.1
PTX3-201ENST00000295927 LINC00959A0A1B0GUT2 108 aa15.65■□□□□ 0.1
PTX3-201ENST00000295927 LBHQ53QV2 105 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms