RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 BRWD1-AS2P59051 145 aa11.06□□□□□ -0.64
SEC16A-202ENST00000290037 IGHV3-30P01768 117 aa11.06□□□□□ -0.64
SEC16A-202ENST00000290037 IGHV3-30-5P0DP03 117 aa11.06□□□□□ -0.64
SEC16A-202ENST00000290037 NOTCH2Q04721 2471 aa11.06□□□□□ -0.64
SEC16A-202ENST00000290037 LELP1Q5T871 98 aa11.05□□□□□ -0.64
SEC16A-202ENST00000290037 SPTSSBQ8NFR3 76 aa11.05□□□□□ -0.64
SEC16A-202ENST00000290037 Q6ZQT7 251 aa11.05□□□□□ -0.64
SEC16A-202ENST00000290037 POLR2KP53803 58 aaKnown RBP11.05□□□□□ -0.64
SEC16A-202ENST00000290037 APRG1Q8IVJ8 170 aa11.05□□□□□ -0.64
SEC16A-202ENST00000290037 M0R378 163 aa11.04□□□□□ -0.64
SEC16A-202ENST00000290037 C11orf45Q8TAV5 145 aa11.04□□□□□ -0.64
SEC16A-202ENST00000290037 WFDC9Q8NEX5 89 aa11.04□□□□□ -0.64
SEC16A-202ENST00000290037 LINC00322Q6ZN03 302 aaPredicted RBP11.04□□□□□ -0.64
SEC16A-202ENST00000290037 FAM236DA0A1B0GTK5 79 aa11.04□□□□□ -0.64
SEC16A-202ENST00000290037 FAM236CP0DP71 79 aa11.04□□□□□ -0.64
SEC16A-202ENST00000290037 E7EUB6 86 aa11.04□□□□□ -0.64
SEC16A-202ENST00000290037 MRAPQ8TCY5 172 aa11.04□□□□□ -0.64
SEC16A-202ENST00000290037 PCSK5Q92824 1860 aa11.04□□□□□ -0.64
SEC16A-202ENST00000290037 F8W735 103 aaPredicted RBP11.03□□□□□ -0.64
SEC16A-202ENST00000290037 UNQ9165/PRO28630Q6UXU0 137 aa11.03□□□□□ -0.64
SEC16A-202ENST00000290037 SPRNQ5BIV9 151 aa11.03□□□□□ -0.64
SEC16A-202ENST00000290037 Q6JHZ5 121 aa11.03□□□□□ -0.64
SEC16A-202ENST00000290037 LINC00173Q6ZV60 143 aa11.03□□□□□ -0.64
SEC16A-202ENST00000290037 CHCHD10Q8WYQ3 142 aaPredicted RBP11.02□□□□□ -0.65
SEC16A-202ENST00000290037 RNASE13Q5GAN3 156 aaKnown RBP11.02□□□□□ -0.65
SEC16A-202ENST00000290037 PRR31Q5SQ13 230 aa11.01□□□□□ -0.65
SEC16A-202ENST00000290037 PRO3102Q9H379 93 aa11.01□□□□□ -0.65
SEC16A-202ENST00000290037 IGHV4-31P0DP07 118 aa11.01□□□□□ -0.65
SEC16A-202ENST00000290037 CCDC168Q8NDH2 2452 aa11.01□□□□□ -0.65
SEC16A-202ENST00000290037 TRAV10A0A0B4J240 114 aa11.01□□□□□ -0.65
SEC16A-202ENST00000290037 BCE1O60756 84 aa11.01□□□□□ -0.65
SEC16A-202ENST00000290037 DEFB136Q30KP8 78 aa11.01□□□□□ -0.65
SEC16A-202ENST00000290037 RNASE8Q8TDE3 154 aaKnown RBP11.01□□□□□ -0.65
SEC16A-202ENST00000290037 LINC01546A6NGU7 62 aa11□□□□□ -0.65
SEC16A-202ENST00000290037 C5orf47Q569G3 176 aa11□□□□□ -0.65
SEC16A-202ENST00000290037 TRAV23DV6A0A075B6W5 121 aa11□□□□□ -0.65
SEC16A-202ENST00000290037 FAM19A3Q7Z5A8 133 aa10.99□□□□□ -0.65
SEC16A-202ENST00000290037 KLK12Q9UKR0 248 aa10.99□□□□□ -0.65
SEC16A-202ENST00000290037 PPDPFQ9H3Y8 114 aa10.99□□□□□ -0.65
SEC16A-202ENST00000290037 ZNF80P51504 273 aaPredicted RBP10.99□□□□□ -0.65
SEC16A-202ENST00000290037 IGLV4-69A0A075B6H9 119 aa10.98□□□□□ -0.65
SEC16A-202ENST00000290037 GRNP28799 593 aaKnown RBP10.98□□□□□ -0.65
SEC16A-202ENST00000290037 GDF5OSQ5U4N7 250 aa10.98□□□□□ -0.65
SEC16A-202ENST00000290037 ZFYVE26Q68DK2 2539 aa10.98□□□□□ -0.65
SEC16A-202ENST00000290037 CLPSL2Q6UWE3 100 aa10.97□□□□□ -0.65
SEC16A-202ENST00000290037 TSHBP01222 138 aa10.97□□□□□ -0.65
SEC16A-202ENST00000290037 USP17L23D6RBM5 183 aa10.97□□□□□ -0.65
SEC16A-202ENST00000290037 TRIAP1O43715 76 aa10.97□□□□□ -0.65
SEC16A-202ENST00000290037 CLEC2BQ92478 149 aa10.97□□□□□ -0.65
SEC16A-202ENST00000290037 UBE2D1P51668 147 aa10.97□□□□□ -0.65
SEC16A-202ENST00000290037 A0A1B0GUV1 79 aa10.96□□□□□ -0.65
SEC16A-202ENST00000290037 A0A1W2PNU3 283 aaPredicted RBP10.96□□□□□ -0.65
SEC16A-202ENST00000290037 Q6ZPA2 131 aa10.96□□□□□ -0.65
SEC16A-202ENST00000290037 C7orf33Q8WU49 177 aa10.96□□□□□ -0.65
SEC16A-202ENST00000290037 DEFB135Q30KP9 77 aa10.96□□□□□ -0.66
SEC16A-202ENST00000290037 COX7CP15954 63 aa10.96□□□□□ -0.66
SEC16A-202ENST00000290037 DCANP1Q8TF63 244 aa10.96□□□□□ -0.66
SEC16A-202ENST00000290037 UBE2D4Q9Y2X8 147 aa10.96□□□□□ -0.66
SEC16A-202ENST00000290037 TRBV10-3A0A0K0K1G6 114 aa10.96□□□□□ -0.66
SEC16A-202ENST00000290037 RPL28P46779 137 aaKnown RBP10.96□□□□□ -0.66
SEC16A-202ENST00000290037 CDKN2A-AS1Q9UH64 79 aa10.96□□□□□ -0.66
SEC16A-202ENST00000290037 LOC107984640A0A0U1RRK4 108 aa10.95□□□□□ -0.66
SEC16A-202ENST00000290037 MSMPQ1L6U9 139 aa10.95□□□□□ -0.66
SEC16A-202ENST00000290037 CRYGDP07320 174 aa10.95□□□□□ -0.66
SEC16A-202ENST00000290037 C14orf132Q9NPU4 83 aa10.95□□□□□ -0.66
SEC16A-202ENST00000290037 COL4A2P08572 1712 aa10.95□□□□□ -0.66
SEC16A-202ENST00000290037 C2orf91Q6ZV80 131 aa10.95□□□□□ -0.66
SEC16A-202ENST00000290037 COL27A1Q8IZC6 1860 aaPredicted RBP10.95□□□□□ -0.66
SEC16A-202ENST00000290037 SYCNQ0VAF6 134 aa10.94□□□□□ -0.66
SEC16A-202ENST00000290037 Q9HAA7 133 aa10.94□□□□□ -0.66
SEC16A-202ENST00000290037 DEFB105AQ8NG35 78 aa10.94□□□□□ -0.66
SEC16A-202ENST00000290037 EGFEM1PQ0D2K5 195 aa10.94□□□□□ -0.66
SEC16A-202ENST00000290037 MUC4Q99102 2169 aa10.94□□□□□ -0.66
SEC16A-202ENST00000290037 IGKV3D-7A0A0C4DH55 119 aa10.94□□□□□ -0.66
SEC16A-202ENST00000290037 LINC00269Q8N2A0 174 aa10.93□□□□□ -0.66
SEC16A-202ENST00000290037 TEX49A0A1B0GTD5 131 aa10.93□□□□□ -0.66
SEC16A-202ENST00000290037 UBE2D3P61077 147 aa10.93□□□□□ -0.66
SEC16A-202ENST00000290037 UBE2D2P62837 147 aa10.93□□□□□ -0.66
SEC16A-202ENST00000290037 ANKRD11Q6UB99 2663 aaPredicted RBP10.93□□□□□ -0.66
SEC16A-202ENST00000290037 RNASE3P12724 160 aaKnown RBP10.93□□□□□ -0.66
SEC16A-202ENST00000290037 Q8N976 141 aa10.92□□□□□ -0.66
SEC16A-202ENST00000290037 CRIP1P50238 77 aa10.92□□□□□ -0.66
SEC16A-202ENST00000290037 RPL37AP8A6NKH3 93 aa10.92□□□□□ -0.66
SEC16A-202ENST00000290037 A0A087WZ39 114 aa10.92□□□□□ -0.66
SEC16A-202ENST00000290037 IGIPA6NJ69 53 aa10.92□□□□□ -0.66
SEC16A-202ENST00000290037 IGLV10-54A0A075B6I4 117 aa10.91□□□□□ -0.66
SEC16A-202ENST00000290037 TRAV7A0A075B6U4 112 aa10.91□□□□□ -0.66
SEC16A-202ENST00000290037 PLA2G5P39877 138 aa10.91□□□□□ -0.66
SEC16A-202ENST00000290037 NCR3O14931 201 aa10.91□□□□□ -0.66
SEC16A-202ENST00000290037 BEAN1Q3B7T3 259 aa10.91□□□□□ -0.66
SEC16A-202ENST00000290037 ANKRD17O75179 2603 aaKnown RBP10.9□□□□□ -0.66
SEC16A-202ENST00000290037 C2orf48Q96LS8 159 aa10.9□□□□□ -0.66
SEC16A-202ENST00000290037 Q6ZTI0 123 aa10.9□□□□□ -0.66
SEC16A-202ENST00000290037 C16orf95Q9H693 158 aa10.9□□□□□ -0.66
SEC16A-202ENST00000290037 TRBV7-6A0A0J9YX20 115 aa10.9□□□□□ -0.67
SEC16A-202ENST00000290037 ASPHD1Q5U4P2 390 aa10.89□□□□□ -0.67
SEC16A-202ENST00000290037 MRPS12O15235 138 aaKnown RBP10.89□□□□□ -0.67
SEC16A-202ENST00000290037 C20orf173Q96LM9 149 aa10.89□□□□□ -0.67
SEC16A-202ENST00000290037 TP53TG3Q9ULZ0 132 aa10.89□□□□□ -0.67
SEC16A-202ENST00000290037 AMELXQ99217 191 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms