RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 LBHQ53QV2 105 aaPredicted RBP6.15□□□□□ -1.43
PTPDC1-201ENST00000288976 PRR9Q5T870 116 aa6.15□□□□□ -1.43
PTPDC1-201ENST00000288976 C10orf126Q8N4M7 172 aa6.15□□□□□ -1.43
PTPDC1-201ENST00000288976 ORAOV1Q8WV07 137 aa6.15□□□□□ -1.43
PTPDC1-201ENST00000288976 HIGD2AQ9BW72 106 aa6.15□□□□□ -1.43
PTPDC1-201ENST00000288976 IGHV4-28A0A0C4DH34 117 aa6.15□□□□□ -1.43
PTPDC1-201ENST00000288976 SPCS1Q9Y6A9 102 aa6.15□□□□□ -1.43
PTPDC1-201ENST00000288976 SPINK8P0C7L1 97 aa6.14□□□□□ -1.43
PTPDC1-201ENST00000288976 STPG4Q8N801 248 aa6.14□□□□□ -1.43
PTPDC1-201ENST00000288976 GATA1P15976 413 aaPredicted RBP6.14□□□□□ -1.43
PTPDC1-201ENST00000288976 ZNF80P51504 273 aaPredicted RBP6.14□□□□□ -1.43
PTPDC1-201ENST00000288976 PTH2Q96A98 100 aa6.14□□□□□ -1.43
PTPDC1-201ENST00000288976 C16orf74Q96GX8 76 aa6.14□□□□□ -1.43
PTPDC1-201ENST00000288976 SMIM27A0A1W2PRY6 76 aa6.14□□□□□ -1.43
PTPDC1-201ENST00000288976 K7ERU9 68 aa6.14□□□□□ -1.43
PTPDC1-201ENST00000288976 HIST1H2BKO60814 126 aa6.14□□□□□ -1.43
PTPDC1-201ENST00000288976 HIST1H2BJP06899 126 aa6.14□□□□□ -1.43
PTPDC1-201ENST00000288976 HIST1H2BOP23527 126 aa6.14□□□□□ -1.43
PTPDC1-201ENST00000288976 HIST1H2BBP33778 126 aa6.14□□□□□ -1.43
PTPDC1-201ENST00000288976 HIST1H2BDP58876 126 aa6.14□□□□□ -1.43
PTPDC1-201ENST00000288976 HIST1H2BCP62807 126 aa6.14□□□□□ -1.43
PTPDC1-201ENST00000288976 HIST2H2BEQ16778 126 aa6.14□□□□□ -1.43
PTPDC1-201ENST00000288976 TTC32Q5I0X7 151 aa6.14□□□□□ -1.43
PTPDC1-201ENST00000288976 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.14□□□□□ -1.43
PTPDC1-201ENST00000288976 HIST1H2BHQ93079 126 aa6.14□□□□□ -1.43
PTPDC1-201ENST00000288976 HIST1H2BNQ99877 126 aa6.14□□□□□ -1.43
PTPDC1-201ENST00000288976 HIST1H2BMQ99879 126 aa6.14□□□□□ -1.43
PTPDC1-201ENST00000288976 Q6ZWC4 215 aa6.13□□□□□ -1.43
PTPDC1-201ENST00000288976 CSNK1G2-AS1Q8NCQ2 148 aa6.13□□□□□ -1.43
PTPDC1-201ENST00000288976 A0A087WZ39 114 aa6.13□□□□□ -1.43
PTPDC1-201ENST00000288976 hADV29S1A0JD25 119 aa6.13□□□□□ -1.43
PTPDC1-201ENST00000288976 NDUFA12Q9UI09 145 aa6.13□□□□□ -1.43
PTPDC1-201ENST00000288976 PRO0255Q9UI72 69 aa6.13□□□□□ -1.43
PTPDC1-201ENST00000288976 TRAV12-1A0A0B4J245 112 aa6.13□□□□□ -1.43
PTPDC1-201ENST00000288976 TRAV4A0A0B4J268 109 aa6.13□□□□□ -1.43
PTPDC1-201ENST00000288976 GIG44P09565 113 aaPredicted RBP6.13□□□□□ -1.43
PTPDC1-201ENST00000288976 IGHV4-30-4P0DP06 118 aa6.13□□□□□ -1.43
PTPDC1-201ENST00000288976 Q6ZTI0 123 aa6.13□□□□□ -1.43
PTPDC1-201ENST00000288976 CDPF1Q6NVV7 123 aa6.13□□□□□ -1.43
PTPDC1-201ENST00000288976 SMIM9A6NGZ8 99 aa6.12□□□□□ -1.43
PTPDC1-201ENST00000288976 FOXI1Q12951 378 aa6.12□□□□□ -1.43
PTPDC1-201ENST00000288976 PIK3CD-AS1Q5SR53 167 aa6.12□□□□□ -1.43
PTPDC1-201ENST00000288976 C9orf85Q96MD7 179 aa6.12□□□□□ -1.43
PTPDC1-201ENST00000288976 MSRB1Q9NZV6 116 aa6.12□□□□□ -1.43
PTPDC1-201ENST00000288976 HAMPP81172 84 aa6.12□□□□□ -1.43
PTPDC1-201ENST00000288976 RETNQ9HD89 108 aa6.12□□□□□ -1.43
PTPDC1-201ENST00000288976 IGLC6P0CF74 106 aa6.11□□□□□ -1.43
PTPDC1-201ENST00000288976 CTRLP40313 264 aa6.11□□□□□ -1.43
PTPDC1-201ENST00000288976 CNFNQ9BYD5 112 aa6.11□□□□□ -1.43
PTPDC1-201ENST00000288976 TRRAPQ9Y4A5 3859 aa6.11□□□□□ -1.43
PTPDC1-201ENST00000288976 COX7A2LO14548 114 aa6.11□□□□□ -1.43
PTPDC1-201ENST00000288976 HIST3H2BBQ8N257 126 aa6.11□□□□□ -1.43
PTPDC1-201ENST00000288976 RBMY1FQ15415 496 aaKnown RBP6.11□□□□□ -1.43
PTPDC1-201ENST00000288976 ATXN8Q156A1 80 aa6.11□□□□□ -1.43
PTPDC1-201ENST00000288976 MDFICQ9P1T7 246 aa6.11□□□□□ -1.43
PTPDC1-201ENST00000288976 CRYGDP07320 174 aa6.11□□□□□ -1.43
PTPDC1-201ENST00000288976 C11orf21Q9P2W6 132 aa6.11□□□□□ -1.43
PTPDC1-201ENST00000288976 C1orf158Q8N1D5 194 aa6.1□□□□□ -1.43
PTPDC1-201ENST00000288976 YPEL4Q96NS1 127 aa6.1□□□□□ -1.43
PTPDC1-201ENST00000288976 FAM104BQ5XKR9 115 aa6.1□□□□□ -1.43
PTPDC1-201ENST00000288976 ZNF575Q86XF7 245 aa6.1□□□□□ -1.43
PTPDC1-201ENST00000288976 RPL39LQ96EH5 51 aaKnown RBP6.1□□□□□ -1.43
PTPDC1-201ENST00000288976 HIST1H2BLQ99880 126 aa6.1□□□□□ -1.43
PTPDC1-201ENST00000288976 NANOS2P60321 138 aaKnown RBP6.1□□□□□ -1.43
PTPDC1-201ENST00000288976 SPAG11BQ08648 103 aa6.1□□□□□ -1.43
PTPDC1-201ENST00000288976 MRPL51Q4U2R6 128 aaKnown RBP6.1□□□□□ -1.43
PTPDC1-201ENST00000288976 TMEM263Q8WUH6 116 aaKnown RBP6.1□□□□□ -1.43
PTPDC1-201ENST00000288976 ZNF479Q96JC4 524 aa6.1□□□□□ -1.43
PTPDC1-201ENST00000288976 GNB1LQ9BYB4 327 aa6.1□□□□□ -1.43
PTPDC1-201ENST00000288976 NPYP01303 97 aa6.09□□□□□ -1.43
PTPDC1-201ENST00000288976 PRM2P04554 102 aa6.09□□□□□ -1.43
PTPDC1-201ENST00000288976 LINC01549A6NIU2 74 aa6.09□□□□□ -1.43
PTPDC1-201ENST00000288976 KIR3DS1Q14943 382 aa6.09□□□□□ -1.43
PTPDC1-201ENST00000288976 Q9H8V8 135 aa6.09□□□□□ -1.43
PTPDC1-201ENST00000288976 TRBV24-1A0A075B6N3 115 aa6.09□□□□□ -1.44
PTPDC1-201ENST00000288976 K7EIL1 84 aa6.09□□□□□ -1.44
PTPDC1-201ENST00000288976 RS1O15537 224 aa6.09□□□□□ -1.44
PTPDC1-201ENST00000288976 C9orf153Q5TBE3 101 aa6.09□□□□□ -1.44
PTPDC1-201ENST00000288976 MTURNQ8N3F0 131 aa6.09□□□□□ -1.44
PTPDC1-201ENST00000288976 TINCRA0A1B0GVN0 87 aa6.08□□□□□ -1.44
PTPDC1-201ENST00000288976 K7EQD1 137 aa6.08□□□□□ -1.44
PTPDC1-201ENST00000288976 CCL25O15444 150 aa6.08□□□□□ -1.44
PTPDC1-201ENST00000288976 FGF6P10767 208 aa6.08□□□□□ -1.44
PTPDC1-201ENST00000288976 Q8N976 141 aa6.08□□□□□ -1.44
PTPDC1-201ENST00000288976 C11orf72Q8NBR9 251 aa6.08□□□□□ -1.44
PTPDC1-201ENST00000288976 RNASE8Q8TDE3 154 aaKnown RBP6.08□□□□□ -1.44
PTPDC1-201ENST00000288976 LINC00526Q96FQ7 95 aa6.08□□□□□ -1.44
PTPDC1-201ENST00000288976 FRMD6-AS1P0C7T7 363 aa6.08□□□□□ -1.44
PTPDC1-201ENST00000288976 MIFP14174 115 aa6.08□□□□□ -1.44
PTPDC1-201ENST00000288976 PET117Q6UWS5 81 aa6.08□□□□□ -1.44
PTPDC1-201ENST00000288976 A0A0J9YXV3 536 aa6.07□□□□□ -1.44
PTPDC1-201ENST00000288976 DAZ2Q13117 558 aaKnown RBP6.07□□□□□ -1.44
PTPDC1-201ENST00000288976 TMEM141Q96I45 108 aa6.07□□□□□ -1.44
PTPDC1-201ENST00000288976 A0A0J9YWU9 116 aa6.07□□□□□ -1.44
PTPDC1-201ENST00000288976 P0DMU3 169 aa6.07□□□□□ -1.44
PTPDC1-201ENST00000288976 FAM231AP0DMU4 169 aa6.07□□□□□ -1.44
PTPDC1-201ENST00000288976 FAM231CP0DMU5 169 aa6.07□□□□□ -1.44
PTPDC1-201ENST00000288976 RNASE3P12724 160 aaKnown RBP6.07□□□□□ -1.44
PTPDC1-201ENST00000288976 ZNF664Q8N3J9 261 aa6.07□□□□□ -1.44
PTPDC1-201ENST00000288976 OVOL2Q9BRP0 275 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms