RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 RAB19A4D1S5 217 aa6.52□□□□□ -1.37
NSMCE2-201ENST00000287437 UMAD1C9J7I0 102 aa6.52□□□□□ -1.37
NSMCE2-201ENST00000287437 ZNF25P17030 456 aaPredicted RBP6.52□□□□□ -1.37
NSMCE2-201ENST00000287437 CTRLP40313 264 aa6.52□□□□□ -1.37
NSMCE2-201ENST00000287437 GNG4P50150 75 aa6.52□□□□□ -1.37
NSMCE2-201ENST00000287437 TWIST1Q15672 202 aa6.52□□□□□ -1.37
NSMCE2-201ENST00000287437 C9orf116Q5BN46 136 aaPredicted RBP6.52□□□□□ -1.37
NSMCE2-201ENST00000287437 PHF5AQ7RTV0 110 aaKnown RBP6.52□□□□□ -1.37
NSMCE2-201ENST00000287437 C9orf62Q8N4C0 152 aa6.52□□□□□ -1.37
NSMCE2-201ENST00000287437 BTF3L4Q96K17 158 aa6.52□□□□□ -1.37
NSMCE2-201ENST00000287437 SDHAF1A6NFY7 115 aa6.51□□□□□ -1.37
NSMCE2-201ENST00000287437 CCL20P78556 96 aa6.51□□□□□ -1.37
NSMCE2-201ENST00000287437 SS18Q15532 418 aa6.51□□□□□ -1.37
NSMCE2-201ENST00000287437 TMEM101Q96IK0 257 aa6.51□□□□□ -1.37
NSMCE2-201ENST00000287437 KRTAP4-2Q9BYR5 136 aa6.51□□□□□ -1.37
NSMCE2-201ENST00000287437 GNG13Q9P2W3 67 aa6.51□□□□□ -1.37
NSMCE2-201ENST00000287437 TRBV20OR9-2A0A075B6H5 130 aa6.5□□□□□ -1.37
NSMCE2-201ENST00000287437 A0A0U1RQV1 116 aa6.5□□□□□ -1.37
NSMCE2-201ENST00000287437 APOMO95445 188 aa6.5□□□□□ -1.37
NSMCE2-201ENST00000287437 FOXA3P55318 350 aaPredicted RBP6.5□□□□□ -1.37
NSMCE2-201ENST00000287437 RPL18AQ02543 176 aaKnown RBP6.5□□□□□ -1.37
NSMCE2-201ENST00000287437 PRR4Q16378 134 aa6.5□□□□□ -1.37
NSMCE2-201ENST00000287437 CD164L2Q6UWJ8 174 aa6.5□□□□□ -1.37
NSMCE2-201ENST00000287437 NUP35Q8NFH5 326 aa6.5□□□□□ -1.37
NSMCE2-201ENST00000287437 DIRC1Q969H9 104 aa6.5□□□□□ -1.37
NSMCE2-201ENST00000287437 ISOC2Q96AB3 205 aa6.5□□□□□ -1.37
NSMCE2-201ENST00000287437 MANBALQ9NQG1 85 aa6.5□□□□□ -1.37
NSMCE2-201ENST00000287437 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.49□□□□□ -1.37
NSMCE2-201ENST00000287437 SMLR1H3BR10 107 aa6.49□□□□□ -1.37
NSMCE2-201ENST00000287437 IGLV7-43P04211 117 aa6.49□□□□□ -1.37
NSMCE2-201ENST00000287437 PMCHP20382 165 aa6.49□□□□□ -1.37
NSMCE2-201ENST00000287437 EIF5AP63241 154 aaKnown RBP6.49□□□□□ -1.37
NSMCE2-201ENST00000287437 MEF2BQ02080 365 aaPredicted RBP6.49□□□□□ -1.37
NSMCE2-201ENST00000287437 EIF5AL1Q6IS14 154 aaKnown RBP6.49□□□□□ -1.37
NSMCE2-201ENST00000287437 SMIM12Q96EX1 92 aa6.49□□□□□ -1.37
NSMCE2-201ENST00000287437 CAMK2N2Q96S95 79 aa6.49□□□□□ -1.37
NSMCE2-201ENST00000287437 CNFNQ9BYD5 112 aa6.49□□□□□ -1.37
NSMCE2-201ENST00000287437 H0Y9J4 135 aa6.48□□□□□ -1.37
NSMCE2-201ENST00000287437 I3L3M4 83 aa6.48□□□□□ -1.37
NSMCE2-201ENST00000287437 ESDP10768 282 aa6.48□□□□□ -1.37
NSMCE2-201ENST00000287437 MALP21145 153 aa6.48□□□□□ -1.37
NSMCE2-201ENST00000287437 NUDT10Q8NFP7 164 aa6.48□□□□□ -1.37
NSMCE2-201ENST00000287437 MRAP2Q96G30 205 aa6.48□□□□□ -1.37
NSMCE2-201ENST00000287437 NUDT11Q96G61 164 aa6.48□□□□□ -1.37
NSMCE2-201ENST00000287437 CDC42SE2Q9NRR3 84 aa6.48□□□□□ -1.37
NSMCE2-201ENST00000287437 TMEM242Q9NWH2 141 aa6.48□□□□□ -1.37
NSMCE2-201ENST00000287437 FAT4Q6V0I7 4981 aa6.47□□□□□ -1.37
NSMCE2-201ENST00000287437 COX7A2LO14548 114 aa6.47□□□□□ -1.37
NSMCE2-201ENST00000287437 TSHBP01222 138 aa6.47□□□□□ -1.37
NSMCE2-201ENST00000287437 ZNF345Q14585 488 aa6.47□□□□□ -1.37
NSMCE2-201ENST00000287437 KRTAP11-1Q8IUC1 163 aa6.47□□□□□ -1.37
NSMCE2-201ENST00000287437 OPRPNQ99935 248 aaPredicted RBP6.47□□□□□ -1.37
NSMCE2-201ENST00000287437 RPP21Q9H633 154 aaKnown RBP6.47□□□□□ -1.37
NSMCE2-201ENST00000287437 IGLV1-50A0A075B6I6 118 aa6.46□□□□□ -1.38
NSMCE2-201ENST00000287437 A0A087WZ39 114 aa6.46□□□□□ -1.38
NSMCE2-201ENST00000287437 BCL2L11O43521 198 aa6.46□□□□□ -1.38
NSMCE2-201ENST00000287437 KRTAP1-4P0C5Y4 121 aa6.46□□□□□ -1.38
NSMCE2-201ENST00000287437 TEX261Q6UWH6 196 aa6.46□□□□□ -1.38
NSMCE2-201ENST00000287437 SMIM15Q7Z3B0 74 aa6.46□□□□□ -1.38
NSMCE2-201ENST00000287437 MRPL52Q86TS9 123 aaKnown RBP6.46□□□□□ -1.38
NSMCE2-201ENST00000287437 RNASE7Q9H1E1 156 aaKnown RBP6.46□□□□□ -1.38
NSMCE2-201ENST00000287437 BIN3Q9NQY0 253 aa6.46□□□□□ -1.38
NSMCE2-201ENST00000287437 MED9Q9NWA0 146 aa6.46□□□□□ -1.38
NSMCE2-201ENST00000287437 TRBV6-5A0A0K0K1A5 114 aa6.45□□□□□ -1.38
NSMCE2-201ENST00000287437 FAM168BA1KXE4 195 aa6.45□□□□□ -1.38
NSMCE2-201ENST00000287437 RNASE13Q5GAN3 156 aaKnown RBP6.45□□□□□ -1.38
NSMCE2-201ENST00000287437 C2orf48Q96LS8 159 aa6.45□□□□□ -1.38
NSMCE2-201ENST00000287437 ST20Q9HBF5 79 aa6.45□□□□□ -1.38
NSMCE2-201ENST00000287437 TRAV1-1A0A0B4J248 108 aa6.44□□□□□ -1.38
NSMCE2-201ENST00000287437 KANTRA0A1W2PQU2 76 aa6.44□□□□□ -1.38
NSMCE2-201ENST00000287437 C7orf77A4D0Y5 90 aa6.44□□□□□ -1.38
NSMCE2-201ENST00000287437 C1orf196B1AJZ1 125 aa6.44□□□□□ -1.38
NSMCE2-201ENST00000287437 K7EN84 100 aa6.44□□□□□ -1.38
NSMCE2-201ENST00000287437 PDE6DO43924 150 aa6.44□□□□□ -1.38
NSMCE2-201ENST00000287437 UBE2D1P51668 147 aa6.44□□□□□ -1.38
NSMCE2-201ENST00000287437 C5orf38Q86SI9 138 aa6.44□□□□□ -1.38
NSMCE2-201ENST00000287437 TRAV13-1A0A0B4J241 112 aa6.43□□□□□ -1.38
NSMCE2-201ENST00000287437 SPAG11BQ08648 103 aa6.43□□□□□ -1.38
NSMCE2-201ENST00000287437 POLR2KP53803 58 aaKnown RBP6.42□□□□□ -1.38
NSMCE2-201ENST00000287437 RNF151Q2KHN1 245 aa6.42□□□□□ -1.38
NSMCE2-201ENST00000287437 FAM19A5Q7Z5A7 132 aaPredicted RBP6.42□□□□□ -1.38
NSMCE2-201ENST00000287437 TSKUQ8WUA8 353 aa6.42□□□□□ -1.38
NSMCE2-201ENST00000287437 TRBV27A0A0K0K1C4 114 aa6.41□□□□□ -1.38
NSMCE2-201ENST00000287437 OCC1Q8TAD7 63 aa6.41□□□□□ -1.38
NSMCE2-201ENST00000287437 UBE2D4Q9Y2X8 147 aa6.41□□□□□ -1.38
NSMCE2-201ENST00000287437 HMSDA8MTL9 139 aa6.4□□□□□ -1.38
NSMCE2-201ENST00000287437 TEX46H3BTG2 121 aa6.4□□□□□ -1.38
NSMCE2-201ENST00000287437 RPL13AP40429 203 aaKnown RBP6.4□□□□□ -1.38
NSMCE2-201ENST00000287437 Q6ZUT4 128 aa6.4□□□□□ -1.38
NSMCE2-201ENST00000287437 KRTAP7-1Q8IUC3 87 aa6.4□□□□□ -1.38
NSMCE2-201ENST00000287437 FAM210AQ96ND0 272 aa6.4□□□□□ -1.38
NSMCE2-201ENST00000287437 MRPL35Q9NZE8 188 aaKnown RBP6.4□□□□□ -1.38
NSMCE2-201ENST00000287437 TSPAN13O95857 204 aa6.39□□□□□ -1.39
NSMCE2-201ENST00000287437 FCER1GP30273 86 aa6.39□□□□□ -1.39
NSMCE2-201ENST00000287437 GAGE2EQ4V326 116 aa6.39□□□□□ -1.39
NSMCE2-201ENST00000287437 C10orf25Q5T742 122 aa6.39□□□□□ -1.39
NSMCE2-201ENST00000287437 OR10D4PQ8NGN7 298 aa6.39□□□□□ -1.39
NSMCE2-201ENST00000287437 ORAOV1Q8WV07 137 aa6.39□□□□□ -1.39
NSMCE2-201ENST00000287437 IMMP2LQ96T52 175 aa6.39□□□□□ -1.39
NSMCE2-201ENST00000287437 GAGE2DQ9UEU5 116 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms