RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 DAND5Q8N907 189 aa8.33□□□□□ -1.08
SCLT1-201ENST00000281142 C9orf85Q96MD7 179 aa8.33□□□□□ -1.08
SCLT1-201ENST00000281142 TRBV7-7A0A0K0K1E9 115 aa8.32□□□□□ -1.08
SCLT1-201ENST00000281142 PRM2P04554 102 aa8.32□□□□□ -1.08
SCLT1-201ENST00000281142 MRPL23Q16540 153 aaKnown RBP8.32□□□□□ -1.08
SCLT1-201ENST00000281142 SPINK13Q1W4C9 94 aa8.32□□□□□ -1.08
SCLT1-201ENST00000281142 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.32□□□□□ -1.08
SCLT1-201ENST00000281142 FAM236AA0A1B0GUQ0 79 aa8.32□□□□□ -1.08
SCLT1-201ENST00000281142 FAM236BA0A1B0GV22 79 aa8.32□□□□□ -1.08
SCLT1-201ENST00000281142 FSHBP01225 129 aa8.32□□□□□ -1.08
SCLT1-201ENST00000281142 DCANP1Q8TF63 244 aa8.32□□□□□ -1.08
SCLT1-201ENST00000281142 DNAJC30Q96LL9 226 aa8.32□□□□□ -1.08
SCLT1-201ENST00000281142 ICOSQ9Y6W8 199 aa8.32□□□□□ -1.08
SCLT1-201ENST00000281142 TRBV30A0A0K0K1B3 111 aa8.31□□□□□ -1.08
SCLT1-201ENST00000281142 TIMM21Q9BVV7 248 aa8.31□□□□□ -1.08
SCLT1-201ENST00000281142 SONP18583 2426 aaKnown RBP8.31□□□□□ -1.08
SCLT1-201ENST00000281142 HTN1P15515 57 aa8.31□□□□□ -1.08
SCLT1-201ENST00000281142 RHOHQ15669 191 aa8.31□□□□□ -1.08
SCLT1-201ENST00000281142 MAST4O15021 2626 aa8.31□□□□□ -1.08
SCLT1-201ENST00000281142 CD28P10747 220 aa8.31□□□□□ -1.08
SCLT1-201ENST00000281142 DAZ1Q9NQZ3 744 aaKnown RBP8.31□□□□□ -1.08
SCLT1-201ENST00000281142 TRGV11A0A075B6L2 103 aa8.3□□□□□ -1.08
SCLT1-201ENST00000281142 NACAE9PAV3 2078 aa8.3□□□□□ -1.08
SCLT1-201ENST00000281142 FAM240AA0A1B0GVK7 77 aa8.3□□□□□ -1.08
SCLT1-201ENST00000281142 I3L3M4 83 aa8.3□□□□□ -1.08
SCLT1-201ENST00000281142 KNCNA6PVL3 124 aa8.29□□□□□ -1.08
SCLT1-201ENST00000281142 C10orf99Q6UWK7 81 aa8.29□□□□□ -1.08
SCLT1-201ENST00000281142 NDUFA12Q9UI09 145 aa8.29□□□□□ -1.08
SCLT1-201ENST00000281142 KLK5Q9Y337 293 aaPredicted RBP8.29□□□□□ -1.08
SCLT1-201ENST00000281142 H3BUX3 64 aa8.29□□□□□ -1.08
SCLT1-201ENST00000281142 NDUFA7O95182 113 aa8.29□□□□□ -1.08
SCLT1-201ENST00000281142 C5orf47Q569G3 176 aa8.29□□□□□ -1.08
SCLT1-201ENST00000281142 C9orf153Q5TBE3 101 aa8.29□□□□□ -1.08
SCLT1-201ENST00000281142 NSD1Q96L73 2696 aaPredicted RBP8.28□□□□□ -1.08
SCLT1-201ENST00000281142 A0A0J9YX75 114 aa8.28□□□□□ -1.08
SCLT1-201ENST00000281142 TMEM101Q96IK0 257 aa8.28□□□□□ -1.08
SCLT1-201ENST00000281142 F8P00451 2351 aa8.28□□□□□ -1.08
SCLT1-201ENST00000281142 IGHV1OR15-1A0A075B7D0 117 aa8.27□□□□□ -1.09
SCLT1-201ENST00000281142 H3BT86 120 aa8.27□□□□□ -1.09
SCLT1-201ENST00000281142 IGHG2P01859 326 aa8.27□□□□□ -1.09
SCLT1-201ENST00000281142 USMG5Q96IX5 58 aa8.27□□□□□ -1.09
SCLT1-201ENST00000281142 RBMY1A1P0DJD3 496 aaKnown RBP8.27□□□□□ -1.09
SCLT1-201ENST00000281142 RBMY1CP0DJD4 496 aa8.27□□□□□ -1.09
SCLT1-201ENST00000281142 HERVK_113P63121 156 aa8.27□□□□□ -1.09
SCLT1-201ENST00000281142 RBMY1FQ15415 496 aaKnown RBP8.27□□□□□ -1.09
SCLT1-201ENST00000281142 C3orf22Q8N5N4 141 aa8.27□□□□□ -1.09
SCLT1-201ENST00000281142 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.26□□□□□ -1.09
SCLT1-201ENST00000281142 IGHV1-58A0A0C4DH39 117 aa8.26□□□□□ -1.09
SCLT1-201ENST00000281142 A0A0U1RRA0 63 aa8.26□□□□□ -1.09
SCLT1-201ENST00000281142 IGKV2-29A2NJV5 120 aaPredicted RBP8.26□□□□□ -1.09
SCLT1-201ENST00000281142 MRPS36P82909 103 aaKnown RBP8.26□□□□□ -1.09
SCLT1-201ENST00000281142 DEFB112Q30KQ8 113 aa8.26□□□□□ -1.09
SCLT1-201ENST00000281142 DEFB121Q5J5C9 76 aa8.26□□□□□ -1.09
SCLT1-201ENST00000281142 SMIM9A6NGZ8 99 aa8.26□□□□□ -1.09
SCLT1-201ENST00000281142 MIAQ16674 131 aa8.26□□□□□ -1.09
SCLT1-201ENST00000281142 DUX5Q96PT3 197 aa8.26□□□□□ -1.09
SCLT1-201ENST00000281142 HIVEP2P31629 2446 aa8.26□□□□□ -1.09
SCLT1-201ENST00000281142 IGHV3-38A0A0C4DH36 116 aa8.26□□□□□ -1.09
SCLT1-201ENST00000281142 INAFM1C9JVW0 142 aa8.26□□□□□ -1.09
SCLT1-201ENST00000281142 Q6ZSN1 163 aa8.26□□□□□ -1.09
SCLT1-201ENST00000281142 FAM19A5Q7Z5A7 132 aaPredicted RBP8.26□□□□□ -1.09
SCLT1-201ENST00000281142 MTORP42345 2549 aa8.25□□□□□ -1.09
SCLT1-201ENST00000281142 TMEM61Q8N0U2 210 aa8.25□□□□□ -1.09
SCLT1-201ENST00000281142 VSIG2Q96IQ7 327 aa8.25□□□□□ -1.09
SCLT1-201ENST00000281142 LST1O00453 97 aa8.25□□□□□ -1.09
SCLT1-201ENST00000281142 SMCR5Q8TEV8 140 aa8.25□□□□□ -1.09
SCLT1-201ENST00000281142 ZNF625Q96I27 306 aaPredicted RBP8.25□□□□□ -1.09
SCLT1-201ENST00000281142 SPANXDQ9BXN6 97 aa8.25□□□□□ -1.09
SCLT1-201ENST00000281142 SPANXCQ9NY87 97 aa8.25□□□□□ -1.09
SCLT1-201ENST00000281142 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.24□□□□□ -1.09
SCLT1-201ENST00000281142 NIPBLQ6KC79 2804 aaeCLIP8.24□□□□□ -1.093e-7■■■■□ 22.5
SCLT1-201ENST00000281142 IGLV1-40P01703 118 aa8.23□□□□□ -1.09
SCLT1-201ENST00000281142 J3KT08 172 aa8.23□□□□□ -1.09
SCLT1-201ENST00000281142 UQCRQO14949 82 aa8.23□□□□□ -1.09
SCLT1-201ENST00000281142 COX6CP09669 75 aa8.23□□□□□ -1.09
SCLT1-201ENST00000281142 CITED2Q99967 270 aaPredicted RBP8.23□□□□□ -1.09
SCLT1-201ENST00000281142 FN1P02751 2386 aaKnown RBP8.23□□□□□ -1.09
SCLT1-201ENST00000281142 NF1P21359 2839 aa8.23□□□□□ -1.09
SCLT1-201ENST00000281142 A6NDX4 124 aa8.23□□□□□ -1.09
SCLT1-201ENST00000281142 IGHV4-59P01825 116 aa8.23□□□□□ -1.09
SCLT1-201ENST00000281142 LINC00526Q96FQ7 95 aa8.23□□□□□ -1.09
SCLT1-201ENST00000281142 CDKN2A-AS1Q9UH64 79 aa8.23□□□□□ -1.09
SCLT1-201ENST00000281142 TEP1Q99973 2627 aaKnown RBP8.22□□□□□ -1.09
SCLT1-201ENST00000281142 Q6YL49 198 aa8.22□□□□□ -1.09
SCLT1-201ENST00000281142 LINC00467Q9BRT7 94 aa8.22□□□□□ -1.09
SCLT1-201ENST00000281142 CHCHD7Q9BUK0 85 aa8.22□□□□□ -1.09
SCLT1-201ENST00000281142 IMUPQ9GZP8 106 aa8.22□□□□□ -1.09
SCLT1-201ENST00000281142 EDA2RQ9HAV5 297 aa8.22□□□□□ -1.09
SCLT1-201ENST00000281142 PYGO1Q9Y3Y4 419 aa8.22□□□□□ -1.09
SCLT1-201ENST00000281142 K7EQG2 157 aa8.21□□□□□ -1.09
SCLT1-201ENST00000281142 UBE2D4Q9Y2X8 147 aa8.21□□□□□ -1.09
SCLT1-201ENST00000281142 C2CD3Q4AC94 2353 aa8.21□□□□□ -1.09
SCLT1-201ENST00000281142 H3BUA1 57 aa8.21□□□□□ -1.1
SCLT1-201ENST00000281142 Q8N2B8 174 aa8.21□□□□□ -1.1
SCLT1-201ENST00000281142 SYNJ2BPP57105 145 aa8.21□□□□□ -1.1
SCLT1-201ENST00000281142 SNRPD3P62318 126 aaKnown RBP8.21□□□□□ -1.1
SCLT1-201ENST00000281142 COX6A2Q02221 97 aa8.21□□□□□ -1.1
SCLT1-201ENST00000281142 A0A1B0GX51 115 aa8.2□□□□□ -1.1
SCLT1-201ENST00000281142 K7EMT4 169 aa8.2□□□□□ -1.1
SCLT1-201ENST00000281142 CFHR3Q02985 330 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms