RNA–Protein interactions for RNA: ENST00000276241.10

CT55-201, Transcript of cancer/testis antigen 55, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CT55, Length 1,445 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-201ENST00000276241 SMKR1H3BMG3 65 aa8.97□□□□□ -0.97
CT55-201ENST00000276241 RAB4AP20338 218 aa8.97□□□□□ -0.97
CT55-201ENST00000276241 HBBP68871 147 aa8.97□□□□□ -0.97
CT55-201ENST00000276241 HAMPP81172 84 aa8.97□□□□□ -0.97
CT55-201ENST00000276241 REG3AQ06141 175 aa8.97□□□□□ -0.97
CT55-201ENST00000276241 C20orf203Q8NBC4 194 aa8.97□□□□□ -0.97
CT55-201ENST00000276241 MRAP2Q96G30 205 aa8.97□□□□□ -0.97
CT55-201ENST00000276241 ST20Q9HBF5 79 aa8.97□□□□□ -0.97
CT55-201ENST00000276241 PRR34Q9NV39 138 aa8.97□□□□□ -0.97
CT55-201ENST00000276241 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.96□□□□□ -0.98
CT55-201ENST00000276241 A0A1B0GXF2 115 aa8.96□□□□□ -0.98
CT55-201ENST00000276241 IGKV2-29A2NJV5 120 aaPredicted RBP8.96□□□□□ -0.98
CT55-201ENST00000276241 PMCHP20382 165 aa8.96□□□□□ -0.98
CT55-201ENST00000276241 CAMPP49913 170 aa8.96□□□□□ -0.98
CT55-201ENST00000276241 C12orf57Q99622 126 aa8.96□□□□□ -0.98
CT55-201ENST00000276241 KRTAP4-5Q9BYR2 181 aa8.96□□□□□ -0.98
CT55-201ENST00000276241 TRBV6-5A0A0K0K1A5 114 aa8.95□□□□□ -0.98
CT55-201ENST00000276241 IFITM10A6NMD0 228 aa8.95□□□□□ -0.98
CT55-201ENST00000276241 I3L3M4 83 aa8.95□□□□□ -0.98
CT55-201ENST00000276241 PDZD11Q5EBL8 140 aa8.95□□□□□ -0.98
CT55-201ENST00000276241 AMMECR1LQ6DCA0 310 aa8.95□□□□□ -0.98
CT55-201ENST00000276241 APOBP04114 4563 aaKnown RBP8.94□□□□□ -0.98
CT55-201ENST00000276241 IGKV3OR2-268A0A0C4DH90 116 aa8.94□□□□□ -0.98
CT55-201ENST00000276241 A0A1B0GUV1 79 aa8.94□□□□□ -0.98
CT55-201ENST00000276241 A0A1B0GW15 77 aa8.94□□□□□ -0.98
CT55-201ENST00000276241 FABP4P15090 132 aa8.94□□□□□ -0.98
CT55-201ENST00000276241 XGP55808 180 aa8.94□□□□□ -0.98
CT55-201ENST00000276241 LINC01620Q4KN68 170 aa8.94□□□□□ -0.98
CT55-201ENST00000276241 RNASEKQ6P5S7 137 aaKnown RBP8.94□□□□□ -0.98
CT55-201ENST00000276241 Q8N1X5 172 aa8.94□□□□□ -0.98
CT55-201ENST00000276241 TMEM18Q96B42 140 aa8.94□□□□□ -0.98
CT55-201ENST00000276241 PACRGQ96M98 296 aaPredicted RBP8.94□□□□□ -0.98
CT55-201ENST00000276241 HIST1H2BLQ99880 126 aa8.94□□□□□ -0.98
CT55-201ENST00000276241 TMEM70Q9BUB7 260 aa8.94□□□□□ -0.98
CT55-201ENST00000276241 PCLOQ9Y6V0 5065 aa8.93□□□□□ -0.98
CT55-201ENST00000276241 USP17L23D6RBM5 183 aa8.93□□□□□ -0.98
CT55-201ENST00000276241 OR10D4PQ8NGN7 298 aa8.93□□□□□ -0.98
CT55-201ENST00000276241 HSPG2P98160 4391 aa8.92□□□□□ -0.98
CT55-201ENST00000276241 TSHBP01222 138 aa8.92□□□□□ -0.98
CT55-201ENST00000276241 MRPL51Q4U2R6 128 aaKnown RBP8.92□□□□□ -0.98
CT55-201ENST00000276241 C14orf177Q52M58 125 aa8.92□□□□□ -0.98
CT55-201ENST00000276241 FGF6P10767 208 aa8.91□□□□□ -0.98
CT55-201ENST00000276241 ESDP10768 282 aa8.91□□□□□ -0.98
CT55-201ENST00000276241 FAM104BQ5XKR9 115 aa8.91□□□□□ -0.98
CT55-201ENST00000276241 BAGE3Q86Y29 109 aa8.91□□□□□ -0.98
CT55-201ENST00000276241 FCER1GP30273 86 aa8.9□□□□□ -0.98
CT55-201ENST00000276241 KRTAP26-1Q6PEX3 210 aa8.9□□□□□ -0.98
CT55-201ENST00000276241 NRACQ8N912 160 aa8.9□□□□□ -0.98
CT55-201ENST00000276241 FAM30AQ9NZY2 134 aa8.9□□□□□ -0.98
CT55-201ENST00000276241 TRAV8-4A0A0B4J246 113 aa8.89□□□□□ -0.99
CT55-201ENST00000276241 TRBV27A0A0K0K1C4 114 aa8.89□□□□□ -0.99
CT55-201ENST00000276241 H7C423 109 aa8.89□□□□□ -0.99
CT55-201ENST00000276241 PPP1R17O96001 155 aa8.89□□□□□ -0.99
CT55-201ENST00000276241 POLR2KP53803 58 aaKnown RBP8.89□□□□□ -0.99
CT55-201ENST00000276241 SUMO2P61956 95 aaKnown RBP8.89□□□□□ -0.99
CT55-201ENST00000276241 KIAA1644Q3SXP7 199 aa8.89□□□□□ -0.99
CT55-201ENST00000276241 SERF1AO75920 110 aa8.88□□□□□ -0.99
CT55-201ENST00000276241 SMR3BP02814 79 aaPredicted RBP8.88□□□□□ -0.99
CT55-201ENST00000276241 CKS2P33552 79 aa8.88□□□□□ -0.99
CT55-201ENST00000276241 TMEM101Q96IK0 257 aa8.88□□□□□ -0.99
CT55-201ENST00000276241 ABCA13Q86UQ4 5058 aa8.88□□□□□ -0.99
CT55-201ENST00000276241 GAGE12HA6NDE8 117 aa8.88□□□□□ -0.99
CT55-201ENST00000276241 D6R8Y8 96 aa8.88□□□□□ -0.99
CT55-201ENST00000276241 VCYO14598 125 aa8.88□□□□□ -0.99
CT55-201ENST00000276241 PRSS1P07477 247 aa8.88□□□□□ -0.99
CT55-201ENST00000276241 ZNF25P17030 456 aaPredicted RBP8.88□□□□□ -0.99
CT55-201ENST00000276241 PYY3Q5JQD4 70 aa8.88□□□□□ -0.99
CT55-201ENST00000276241 KIR2DL4Q99706 377 aa8.88□□□□□ -0.99
CT55-201ENST00000276241 EPM2AB3EWF7 344 aa8.87□□□□□ -0.99
CT55-201ENST00000276241 Q5VSD8 79 aa8.87□□□□□ -0.99
CT55-201ENST00000276241 OR5A1Q8NGJ0 315 aa8.87□□□□□ -0.99
CT55-201ENST00000276241 C18orf32Q8TCD1 76 aa8.87□□□□□ -0.99
CT55-201ENST00000276241 ALKBH7Q9BT30 221 aaPredicted RBP8.87□□□□□ -0.99
CT55-201ENST00000276241 hDV102S1A0JD36 115 aa8.86□□□□□ -0.99
CT55-201ENST00000276241 TNFRSF6BO95407 300 aa8.86□□□□□ -0.99
CT55-201ENST00000276241 LINC00310P59036 64 aa8.86□□□□□ -0.99
CT55-201ENST00000276241 S100A12P80511 92 aa8.86□□□□□ -0.99
CT55-201ENST00000276241 JOSD1Q15040 202 aaPredicted RBP8.86□□□□□ -0.99
CT55-201ENST00000276241 NPYP01303 97 aa8.85□□□□□ -0.99
CT55-201ENST00000276241 Q6ZSA8 131 aa8.85□□□□□ -0.99
CT55-201ENST00000276241 CHCHD10Q8WYQ3 142 aaPredicted RBP8.85□□□□□ -0.99
CT55-201ENST00000276241 NUPR1O60356 82 aa8.84□□□□□ -0.99
CT55-201ENST00000276241 MRPL52Q86TS9 123 aaKnown RBP8.84□□□□□ -0.99
CT55-201ENST00000276241 C20orf78Q9BR46 151 aa8.84□□□□□ -0.99
CT55-201ENST00000276241 SMIM2Q9BVW6 85 aa8.84□□□□□ -0.99
CT55-201ENST00000276241 XCL1P47992 114 aa8.83□□□□□ -1
CT55-201ENST00000276241 RNASE13Q5GAN3 156 aaKnown RBP8.83□□□□□ -1
CT55-201ENST00000276241 DGAT2L7PQ6IED9 249 aa8.83□□□□□ -1
CT55-201ENST00000276241 ORMDL3Q8N138 153 aa8.83□□□□□ -1
CT55-201ENST00000276241 CCL25O15444 150 aa8.82□□□□□ -1
CT55-201ENST00000276241 HSBP1O75506 76 aa8.82□□□□□ -1
CT55-201ENST00000276241 PPBPP02775 128 aa8.82□□□□□ -1
CT55-201ENST00000276241 HIGD2BQ4VC39 106 aa8.82□□□□□ -1
CT55-201ENST00000276241 SCXQ7RTU7 201 aa8.82□□□□□ -1
CT55-201ENST00000276241 ZNF664Q8N3J9 261 aa8.82□□□□□ -1
CT55-201ENST00000276241 CHCHD1Q96BP2 118 aaKnown RBP8.82□□□□□ -1
CT55-201ENST00000276241 PRELID3AQ96N28 172 aa8.82□□□□□ -1
CT55-201ENST00000276241 UBE2D4Q9Y2X8 147 aa8.82□□□□□ -1
CT55-201ENST00000276241 LINC00959A0A1B0GUT2 108 aa8.81□□□□□ -1
CT55-201ENST00000276241 C15orf56Q8N910 161 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms