RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 UBE2D1P51668 147 aa8.82□□□□□ -1
SHPRH-201ENST00000275233 CDSNQ15517 529 aa8.82□□□□□ -1
SHPRH-201ENST00000275233 LINC00574Q9H8X3 128 aa8.82□□□□□ -1
SHPRH-201ENST00000275233 KPRPQ5T749 579 aaPredicted RBP8.81□□□□□ -1
SHPRH-201ENST00000275233 TMEM223A0PJW6 202 aa8.81□□□□□ -1
SHPRH-201ENST00000275233 C7orf33Q8WU49 177 aa8.81□□□□□ -1
SHPRH-201ENST00000275233 C9orf85Q96MD7 179 aa8.81□□□□□ -1
SHPRH-201ENST00000275233 SPATA12Q7Z6I5 190 aa8.81□□□□□ -1
SHPRH-201ENST00000275233 C1orf158Q8N1D5 194 aa8.81□□□□□ -1
SHPRH-201ENST00000275233 BDP1A6H8Y1 2624 aa8.81□□□□□ -1
SHPRH-201ENST00000275233 SMIM20Q8N5G0 67 aa8.8□□□□□ -1
SHPRH-201ENST00000275233 C3orf84H3BNL1 204 aa8.8□□□□□ -1
SHPRH-201ENST00000275233 M0QY20 66 aa8.8□□□□□ -1
SHPRH-201ENST00000275233 TEX49A0A1B0GTD5 131 aa8.8□□□□□ -1
SHPRH-201ENST00000275233 H3BT86 120 aa8.8□□□□□ -1
SHPRH-201ENST00000275233 CRIP3Q6Q6R5 217 aa8.8□□□□□ -1
SHPRH-201ENST00000275233 ZNF295-AS1Q8N0V1 137 aa8.8□□□□□ -1
SHPRH-201ENST00000275233 ZNF22P17026 224 aaPredicted RBP8.8□□□□□ -1
SHPRH-201ENST00000275233 SYCNQ0VAF6 134 aa8.8□□□□□ -1
SHPRH-201ENST00000275233 RNASE8Q8TDE3 154 aaKnown RBP8.8□□□□□ -1
SHPRH-201ENST00000275233 SVIPQ8NHG7 77 aa8.79□□□□□ -1
SHPRH-201ENST00000275233 PLA2G2AP14555 144 aa8.79□□□□□ -1
SHPRH-201ENST00000275233 PSMG3-AS1Q96PY0 264 aa8.79□□□□□ -1
SHPRH-201ENST00000275233 IGLV9-49A0A0B4J1Y8 123 aa8.78□□□□□ -1
SHPRH-201ENST00000275233 EDN2P20800 178 aa8.78□□□□□ -1
SHPRH-201ENST00000275233 EIF4EBP1Q13541 118 aaPredicted RBP8.78□□□□□ -1
SHPRH-201ENST00000275233 MPLKIPQ8TAP9 179 aa8.78□□□□□ -1
SHPRH-201ENST00000275233 H7C423 109 aa8.78□□□□□ -1
SHPRH-201ENST00000275233 ENHOQ6UWT2 76 aa8.78□□□□□ -1
SHPRH-201ENST00000275233 MAPKAPK5-AS1Q8N8E1 139 aa8.78□□□□□ -1
SHPRH-201ENST00000275233 UBE2D4Q9Y2X8 147 aa8.78□□□□□ -1
SHPRH-201ENST00000275233 KIR2DL5BQ8NHK3 375 aa8.77□□□□□ -1.01
SHPRH-201ENST00000275233 LINC00308Q8TCZ7 52 aa8.77□□□□□ -1.01
SHPRH-201ENST00000275233 RETNQ9HD89 108 aa8.77□□□□□ -1.01
SHPRH-201ENST00000275233 PRR9Q5T870 116 aa8.77□□□□□ -1.01
SHPRH-201ENST00000275233 RNF185Q96GF1 192 aa8.77□□□□□ -1.01
SHPRH-201ENST00000275233 C6orf99Q4VX62 202 aa8.77□□□□□ -1.01
SHPRH-201ENST00000275233 MLST8Q9BVC4 326 aa8.77□□□□□ -1.01
SHPRH-201ENST00000275233 TRBV6-4A0A1B0GX49 114 aa8.77□□□□□ -1.01
SHPRH-201ENST00000275233 USP17L23D6RBM5 183 aa8.77□□□□□ -1.01
SHPRH-201ENST00000275233 RBX1P62877 108 aa8.77□□□□□ -1.01
SHPRH-201ENST00000275233 EBI3Q14213 229 aa8.76□□□□□ -1.01
SHPRH-201ENST00000275233 PRO3102Q9H379 93 aa8.75□□□□□ -1.01
SHPRH-201ENST00000275233 G3V4G9 280 aa8.75□□□□□ -1.01
SHPRH-201ENST00000275233 KRTAP10-9P60411 292 aa8.75□□□□□ -1.01
SHPRH-201ENST00000275233 SPTSSBQ8NFR3 76 aa8.75□□□□□ -1.01
SHPRH-201ENST00000275233 PDE6GP18545 87 aa8.75□□□□□ -1.01
SHPRH-201ENST00000275233 HCFC1P51610 2035 aa8.75□□□□□ -1.01
SHPRH-201ENST00000275233 PTPN13Q12923 2485 aa8.75□□□□□ -1.01
SHPRH-201ENST00000275233 IBA57-AS1B1ANH7 110 aa8.75□□□□□ -1.01
SHPRH-201ENST00000275233 TRIAP1O43715 76 aa8.74□□□□□ -1.01
SHPRH-201ENST00000275233 BRK1Q8WUW1 75 aa8.74□□□□□ -1.01
SHPRH-201ENST00000275233 SPANXB1Q9NS25 103 aaPredicted RBP8.74□□□□□ -1.01
SHPRH-201ENST00000275233 ARHGAP32A7KAX9 2087 aa8.74□□□□□ -1.01
SHPRH-201ENST00000275233 UBE2D3P61077 147 aa8.74□□□□□ -1.01
SHPRH-201ENST00000275233 SPG11Q96JI7 2443 aa8.74□□□□□ -1.01
SHPRH-201ENST00000275233 MBD6Q96DN6 1003 aa8.74□□□□□ -1.01
SHPRH-201ENST00000275233 CCKP06307 115 aa8.74□□□□□ -1.01
SHPRH-201ENST00000275233 NDUFC2O95298 119 aa8.73□□□□□ -1.01
SHPRH-201ENST00000275233 IGHV4-30-4P0DP06 118 aa8.73□□□□□ -1.01
SHPRH-201ENST00000275233 RNASE3P12724 160 aaKnown RBP8.73□□□□□ -1.01
SHPRH-201ENST00000275233 PLXNB1O43157 2135 aa8.73□□□□□ -1.01
SHPRH-201ENST00000275233 AVPP01185 164 aa8.73□□□□□ -1.01
SHPRH-201ENST00000275233 TSHBP01222 138 aa8.73□□□□□ -1.01
SHPRH-201ENST00000275233 SORL1Q92673 2214 aa8.73□□□□□ -1.01
SHPRH-201ENST00000275233 CSPG4Q6UVK1 2322 aa8.73□□□□□ -1.01
SHPRH-201ENST00000275233 C20orf197Q8N268 126 aa8.73□□□□□ -1.01
SHPRH-201ENST00000275233 C3orf22Q8N5N4 141 aa8.73□□□□□ -1.01
SHPRH-201ENST00000275233 RAI1Q7Z5J4 1906 aaPredicted RBP8.72□□□□□ -1.01
SHPRH-201ENST00000275233 TRBV6-5A0A0K0K1A5 114 aa8.72□□□□□ -1.01
SHPRH-201ENST00000275233 LINC00643Q86TS7 51 aa8.72□□□□□ -1.01
SHPRH-201ENST00000275233 LINC00959A0A1B0GUT2 108 aa8.72□□□□□ -1.01
SHPRH-201ENST00000275233 J3KT08 172 aa8.72□□□□□ -1.01
SHPRH-201ENST00000275233 WFDC13Q8IUB5 93 aa8.72□□□□□ -1.01
SHPRH-201ENST00000275233 BRI3O95415 125 aa8.71□□□□□ -1.01
SHPRH-201ENST00000275233 PLAC8L1A1L4L8 177 aa8.71□□□□□ -1.01
SHPRH-201ENST00000275233 C11orf21Q9P2W6 132 aa8.71□□□□□ -1.01
SHPRH-201ENST00000275233 IGLV2-11P01706 119 aa8.71□□□□□ -1.02
SHPRH-201ENST00000275233 GAS8-AS1O95177 125 aa8.71□□□□□ -1.02
SHPRH-201ENST00000275233 LELP1Q5T871 98 aa8.71□□□□□ -1.02
SHPRH-201ENST00000275233 CD164L2Q6UWJ8 174 aa8.71□□□□□ -1.02
SHPRH-201ENST00000275233 MT-ATP8P03928 68 aa8.7□□□□□ -1.02
SHPRH-201ENST00000275233 FSTL3O95633 263 aa8.7□□□□□ -1.02
SHPRH-201ENST00000275233 IGLV4-69A0A075B6H9 119 aa8.7□□□□□ -1.02
SHPRH-201ENST00000275233 Q8N6K4 173 aa8.69□□□□□ -1.02
SHPRH-201ENST00000275233 NDUFA7O95182 113 aa8.69□□□□□ -1.02
SHPRH-201ENST00000275233 CUL9Q8IWT3 2517 aa8.69□□□□□ -1.02
SHPRH-201ENST00000275233 LOC107984640A0A0U1RRK4 108 aa8.69□□□□□ -1.02
SHPRH-201ENST00000275233 Q6ZQY7 126 aa8.69□□□□□ -1.02
SHPRH-201ENST00000275233 NRACQ8N912 160 aa8.68□□□□□ -1.02
SHPRH-201ENST00000275233 IGLV1-40P01703 118 aa8.68□□□□□ -1.02
SHPRH-201ENST00000275233 EXPH5Q8NEV8 1989 aa8.68□□□□□ -1.02
SHPRH-201ENST00000275233 U3KQK5 164 aa8.68□□□□□ -1.02
SHPRH-201ENST00000275233 M0R378 163 aa8.67□□□□□ -1.02
SHPRH-201ENST00000275233 PRRC2AP48634 2157 aaKnown RBP8.67□□□□□ -1.02
SHPRH-201ENST00000275233 NDUFV3P56181 108 aaKnown RBP8.67□□□□□ -1.02
SHPRH-201ENST00000275233 PRR4Q16378 134 aa8.67□□□□□ -1.02
SHPRH-201ENST00000275233 SMIM11BQ8TCY0 68 aa8.67□□□□□ -1.02
SHPRH-201ENST00000275233 SONP18583 2426 aaKnown RBP8.67□□□□□ -1.02
SHPRH-201ENST00000275233 TRBV27A0A0K0K1C4 114 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms