RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 MRPL53Q96EL3 112 aaKnown RBP9.43□□□□□ -0.9
HERC6-202ENST00000273960 PIMREGQ9BSJ6 248 aa9.43□□□□□ -0.9
HERC6-202ENST00000273960 IGHV1-58A0A0C4DH39 117 aa9.42□□□□□ -0.9
HERC6-202ENST00000273960 TINCRA0A1B0GVN0 87 aa9.42□□□□□ -0.9
HERC6-202ENST00000273960 PIK3CD-AS1Q5SR53 167 aa9.42□□□□□ -0.9
HERC6-202ENST00000273960 CITED2Q99967 270 aaPredicted RBP9.42□□□□□ -0.9
HERC6-202ENST00000273960 CELSR2Q9HCU4 2923 aa9.42□□□□□ -0.9
HERC6-202ENST00000273960 H3BUX3 64 aa9.41□□□□□ -0.9
HERC6-202ENST00000273960 HIST1H4AP62805 103 aaKnown RBP9.41□□□□□ -0.9
HERC6-202ENST00000273960 PRORYQ9H606 182 aa9.41□□□□□ -0.9
HERC6-202ENST00000273960 C14orf132Q9NPU4 83 aa9.41□□□□□ -0.9
HERC6-202ENST00000273960 IGHV4-30-2A0A087WSY4 118 aa9.41□□□□□ -0.9
HERC6-202ENST00000273960 IGHV4-38-2P0DP08 117 aa9.41□□□□□ -0.9
HERC6-202ENST00000273960 LINC00643Q86TS7 51 aa9.41□□□□□ -0.9
HERC6-202ENST00000273960 VPS13CQ709C8 3753 aa9.41□□□□□ -0.9
HERC6-202ENST00000273960 KHDC1LQ5JSQ8 128 aa9.4□□□□□ -0.9
HERC6-202ENST00000273960 WFDC9Q8NEX5 89 aa9.4□□□□□ -0.9
HERC6-202ENST00000273960 VSIG2Q96IQ7 327 aa9.4□□□□□ -0.9
HERC6-202ENST00000273960 FAM218AQ96MZ4 157 aa9.4□□□□□ -0.9
HERC6-202ENST00000273960 LENEPQ9Y5L5 61 aa9.4□□□□□ -0.9
HERC6-202ENST00000273960 LINC00526Q96FQ7 95 aa9.4□□□□□ -0.9
HERC6-202ENST00000273960 IGHV1-69P01742 117 aa9.4□□□□□ -0.91
HERC6-202ENST00000273960 TRACP01848 142 aa9.4□□□□□ -0.91
HERC6-202ENST00000273960 ATP5G1P05496 136 aa9.4□□□□□ -0.91
HERC6-202ENST00000273960 LMO4P61968 165 aa9.4□□□□□ -0.91
HERC6-202ENST00000273960 U3KQE9 123 aa9.4□□□□□ -0.91
HERC6-202ENST00000273960 COX7CP15954 63 aa9.39□□□□□ -0.91
HERC6-202ENST00000273960 PEMTQ9UBM1 199 aa9.39□□□□□ -0.91
HERC6-202ENST00000273960 C10orf105Q8TEF2 133 aa9.39□□□□□ -0.91
HERC6-202ENST00000273960 FAM240AA0A1B0GVK7 77 aa9.38□□□□□ -0.91
HERC6-202ENST00000273960 RNASE1P07998 156 aaKnown RBP9.38□□□□□ -0.91
HERC6-202ENST00000273960 CIRBPQ14011 172 aaKnown RBP9.38□□□□□ -0.91
HERC6-202ENST00000273960 C9orf129Q5T035 196 aaKnown RBP9.38□□□□□ -0.91
HERC6-202ENST00000273960 DNAL4O96015 105 aa9.38□□□□□ -0.91
HERC6-202ENST00000273960 OR13C6PQ8NH95 151 aa9.38□□□□□ -0.91
HERC6-202ENST00000273960 FN1P02751 2386 aaKnown RBP9.38□□□□□ -0.91
HERC6-202ENST00000273960 SLPIP03973 132 aa9.37□□□□□ -0.91
HERC6-202ENST00000273960 BLCAPP62952 87 aa9.37□□□□□ -0.91
HERC6-202ENST00000273960 PRIMA1Q86XR5 153 aa9.37□□□□□ -0.91
HERC6-202ENST00000273960 SIRPDQ9H106 197 aa9.37□□□□□ -0.91
HERC6-202ENST00000273960 TOMM7Q9P0U1 55 aa9.37□□□□□ -0.91
HERC6-202ENST00000273960 HECTD1Q9ULT8 2610 aa9.37□□□□□ -0.91
HERC6-202ENST00000273960 SOCS3O14543 225 aa9.37□□□□□ -0.91
HERC6-202ENST00000273960 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.37□□□□□ -0.91
HERC6-202ENST00000273960 LINC00308Q8TCZ7 52 aa9.37□□□□□ -0.91
HERC6-202ENST00000273960 MINOS1-NBL1R4GNA1 71 aa9.37□□□□□ -0.91
HERC6-202ENST00000273960 HIVEP2P31629 2446 aa9.37□□□□□ -0.91
HERC6-202ENST00000273960 COX6A2Q02221 97 aa9.37□□□□□ -0.91
HERC6-202ENST00000273960 DCANP1Q8TF63 244 aa9.37□□□□□ -0.91
HERC6-202ENST00000273960 LINC00467Q9BRT7 94 aa9.37□□□□□ -0.91
HERC6-202ENST00000273960 SPANXA1Q9NS26 97 aa9.36□□□□□ -0.91
HERC6-202ENST00000273960 IGHG2P01859 326 aa9.36□□□□□ -0.91
HERC6-202ENST00000273960 SOSTDC1Q6X4U4 206 aa9.36□□□□□ -0.91
HERC6-202ENST00000273960 COX7A2LO14548 114 aa9.36□□□□□ -0.91
HERC6-202ENST00000273960 Q6ZSN1 163 aa9.36□□□□□ -0.91
HERC6-202ENST00000273960 IGHV3OR16-12A0A075B7B8 117 aa9.35□□□□□ -0.91
HERC6-202ENST00000273960 IGHV1OR15-1A0A075B7D0 117 aa9.35□□□□□ -0.91
HERC6-202ENST00000273960 HIST2H2BDQ6DRA6 164 aa9.35□□□□□ -0.91
HERC6-202ENST00000273960 C5orf56Q8N8D9 126 aa9.35□□□□□ -0.91
HERC6-202ENST00000273960 SPANXDQ9BXN6 97 aa9.35□□□□□ -0.91
HERC6-202ENST00000273960 SPANXCQ9NY87 97 aa9.35□□□□□ -0.91
HERC6-202ENST00000273960 CHD6Q8TD26 2715 aa9.34□□□□□ -0.91
HERC6-202ENST00000273960 KLLNB2CW77 178 aa9.34□□□□□ -0.91
HERC6-202ENST00000273960 MED14OSP0DP75 135 aa9.34□□□□□ -0.91
HERC6-202ENST00000273960 MRPS36P82909 103 aaKnown RBP9.34□□□□□ -0.91
HERC6-202ENST00000273960 C10orf99Q6UWK7 81 aa9.34□□□□□ -0.91
HERC6-202ENST00000273960 TRBV6-5A0A0K0K1A5 114 aa9.34□□□□□ -0.91
HERC6-202ENST00000273960 FAM104AQ969W3 186 aa9.34□□□□□ -0.91
HERC6-202ENST00000273960 A0A0J9YX75 114 aa9.33□□□□□ -0.92
HERC6-202ENST00000273960 NCR3O14931 201 aa9.33□□□□□ -0.92
HERC6-202ENST00000273960 OXTP01178 125 aa9.33□□□□□ -0.92
HERC6-202ENST00000273960 HILS1P60008 231 aa9.33□□□□□ -0.92
HERC6-202ENST00000273960 C11orf68Q9H3H3 251 aaKnown RBP9.33□□□□□ -0.92
HERC6-202ENST00000273960 NDUFA4O00483 81 aa9.33□□□□□ -0.92
HERC6-202ENST00000273960 ACYP1P07311 99 aa9.33□□□□□ -0.92
HERC6-202ENST00000273960 HIST2H2BCQ6DN03 193 aa9.33□□□□□ -0.92
HERC6-202ENST00000273960 IGHV3-53P01767 116 aa9.33□□□□□ -0.92
HERC6-202ENST00000273960 TEX15Q9BXT5 2789 aa9.33□□□□□ -0.92
HERC6-202ENST00000273960 LRRC75A-AS1Q8N1F1 130 aa9.32□□□□□ -0.92
HERC6-202ENST00000273960 C11orf44Q8N8P7 122 aa9.32□□□□□ -0.92
HERC6-202ENST00000273960 DEFB121Q5J5C9 76 aa9.32□□□□□ -0.92
HERC6-202ENST00000273960 C2orf48Q96LS8 159 aa9.32□□□□□ -0.92
HERC6-202ENST00000273960 MSMBP08118 114 aa9.32□□□□□ -0.92
HERC6-202ENST00000273960 IMUPQ9GZP8 106 aa9.32□□□□□ -0.92
HERC6-202ENST00000273960 MOB4Q9Y3A3 225 aa9.32□□□□□ -0.92
HERC6-202ENST00000273960 TRAV23DV6A0A075B6W5 121 aa9.31□□□□□ -0.92
HERC6-202ENST00000273960 FAM19A4Q96LR4 140 aa9.31□□□□□ -0.92
HERC6-202ENST00000273960 F5H768 121 aa9.31□□□□□ -0.92
HERC6-202ENST00000273960 BBC3Q96PG8 261 aaPredicted RBP9.31□□□□□ -0.92
HERC6-202ENST00000273960 LINC00846Q9NV44 126 aa9.31□□□□□ -0.92
HERC6-202ENST00000273960 HELZ2Q9BYK8 2649 aaKnown RBP9.31□□□□□ -0.92
HERC6-202ENST00000273960 ATOX1O00244 68 aa9.3□□□□□ -0.92
HERC6-202ENST00000273960 DPH3Q96FX2 82 aa9.3□□□□□ -0.92
HERC6-202ENST00000273960 MALP21145 153 aa9.3□□□□□ -0.92
HERC6-202ENST00000273960 CFHR3Q02985 330 aa9.3□□□□□ -0.92
HERC6-202ENST00000273960 C9orf85Q96MD7 179 aa9.3□□□□□ -0.92
HERC6-202ENST00000273960 FLNAP21333 2647 aaKnown RBP9.3□□□□□ -0.92
HERC6-202ENST00000273960 A0A087WYN8 130 aa9.3□□□□□ -0.92
HERC6-202ENST00000273960 AVPP01185 164 aa9.29□□□□□ -0.92
HERC6-202ENST00000273960 IGHV4-59P01825 116 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms