RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 VPREB3Q9UKI3 123 aa19.83■□□□□ 0.77
CBX4-201ENST00000269397 WNK1Q9H4A3 2382 aa19.83■□□□□ 0.77
CBX4-201ENST00000269397 CHD6Q8TD26 2715 aa19.83■□□□□ 0.77
CBX4-201ENST00000269397 PRORYQ9H606 182 aa19.83■□□□□ 0.76
CBX4-201ENST00000269397 IGHV3OR16-12A0A075B7B8 117 aa19.82■□□□□ 0.76
CBX4-201ENST00000269397 NDUFA1O15239 70 aa19.82■□□□□ 0.76
CBX4-201ENST00000269397 LINC01356Q8N9X3 169 aa19.81■□□□□ 0.76
CBX4-201ENST00000269397 FBN2P35556 2912 aa19.81■□□□□ 0.76
CBX4-201ENST00000269397 TEX15Q9BXT5 2789 aa19.81■□□□□ 0.76
CBX4-201ENST00000269397 ACACBO00763 2458 aa19.81■□□□□ 0.76
CBX4-201ENST00000269397 LINC00694P0DN24 101 aa19.8■□□□□ 0.76
CBX4-201ENST00000269397 KHDC1LQ5JSQ8 128 aa19.8■□□□□ 0.76
CBX4-201ENST00000269397 LINC00308Q8TCZ7 52 aa19.8■□□□□ 0.76
CBX4-201ENST00000269397 MAP6D1Q9H9H5 199 aa19.79■□□□□ 0.76
CBX4-201ENST00000269397 TIMM17BO60830 172 aa19.79■□□□□ 0.76
CBX4-201ENST00000269397 XCL2Q9UBD3 114 aa19.79■□□□□ 0.76
CBX4-201ENST00000269397 FAM208BQ5VWN6 2430 aa19.78■□□□□ 0.76
CBX4-201ENST00000269397 CIRBPQ14011 172 aaKnown RBP19.78■□□□□ 0.76
CBX4-201ENST00000269397 LINC00242Q5T6M2 205 aa19.78■□□□□ 0.76
CBX4-201ENST00000269397 TRAV13-1A0A0B4J241 112 aa19.78■□□□□ 0.76
CBX4-201ENST00000269397 TLN2Q9Y4G6 2542 aa19.77■□□□□ 0.76
CBX4-201ENST00000269397 GAGE12JA6NER3 117 aa19.77■□□□□ 0.76
CBX4-201ENST00000269397 A8MTW9 85 aa19.77■□□□□ 0.76
CBX4-201ENST00000269397 GAGE7O76087 117 aa19.77■□□□□ 0.76
CBX4-201ENST00000269397 GAGE12FP0CL80 117 aa19.77■□□□□ 0.76
CBX4-201ENST00000269397 GAGE12GP0CL81 117 aa19.77■□□□□ 0.76
CBX4-201ENST00000269397 GAGE12IP0CL82 117 aa19.77■□□□□ 0.76
CBX4-201ENST00000269397 TIRAPP58753 221 aa19.77■□□□□ 0.76
CBX4-201ENST00000269397 GAGE4Q13068 117 aa19.77■□□□□ 0.76
CBX4-201ENST00000269397 Q8N2B8 174 aa19.77■□□□□ 0.76
CBX4-201ENST00000269397 CACNA1AO00555 2505 aa19.76■□□□□ 0.75
CBX4-201ENST00000269397 IGLV5-45A0A087WSX0 123 aa19.76■□□□□ 0.75
CBX4-201ENST00000269397 Q6Q795 121 aa19.76■□□□□ 0.75
CBX4-201ENST00000269397 SOSTDC1Q6X4U4 206 aa19.76■□□□□ 0.75
CBX4-201ENST00000269397 DNAJC30Q96LL9 226 aa19.75■□□□□ 0.75
CBX4-201ENST00000269397 IGSF10Q6WRI0 2623 aa19.75■□□□□ 0.75
CBX4-201ENST00000269397 RS1O15537 224 aa19.73■□□□□ 0.75
CBX4-201ENST00000269397 PIK3CD-AS1Q5SR53 167 aa19.73■□□□□ 0.75
CBX4-201ENST00000269397 DYNLRB2Q8TF09 96 aa19.73■□□□□ 0.75
CBX4-201ENST00000269397 BEAN1Q3B7T3 259 aa19.73■□□□□ 0.75
CBX4-201ENST00000269397 INSP01308 110 aa19.72■□□□□ 0.75
CBX4-201ENST00000269397 EPG5Q9HCE0 2579 aa19.72■□□□□ 0.75
CBX4-201ENST00000269397 Q6YL49 198 aa19.72■□□□□ 0.75
CBX4-201ENST00000269397 NIPBLQ6KC79 2804 aaeCLIP19.72■□□□□ 0.752e-6■■□□□ 14
CBX4-201ENST00000269397 TRGV1A0A0A0MS02 117 aa19.71■□□□□ 0.75
CBX4-201ENST00000269397 IGLV5-39A0A0G2JS06 123 aa19.71■□□□□ 0.75
CBX4-201ENST00000269397 HERVK_113P63121 156 aa19.71■□□□□ 0.75
CBX4-201ENST00000269397 MEIG1Q5JSS6 88 aa19.71■□□□□ 0.75
CBX4-201ENST00000269397 SMIM1B2RUZ4 78 aa19.7■□□□□ 0.74
CBX4-201ENST00000269397 PRIMA1Q86XR5 153 aa19.7■□□□□ 0.74
CBX4-201ENST00000269397 ABCA12Q86UK0 2595 aa19.7■□□□□ 0.74
CBX4-201ENST00000269397 DEFB121Q5J5C9 76 aa19.69■□□□□ 0.74
CBX4-201ENST00000269397 PTPN13Q12923 2485 aa19.69■□□□□ 0.74
CBX4-201ENST00000269397 PIEZO1Q92508 2521 aa19.69■□□□□ 0.74
CBX4-201ENST00000269397 AKAP9Q99996 3911 aa19.69■□□□□ 0.74
CBX4-201ENST00000269397 JMJD1CQ15652 2540 aa19.69■□□□□ 0.74
CBX4-201ENST00000269397 SETD2Q9BYW2 2564 aaPredicted RBP19.68■□□□□ 0.74
CBX4-201ENST00000269397 A0A096LNT2 108 aa19.68■□□□□ 0.74
CBX4-201ENST00000269397 CHCHD5Q9BSY4 110 aa19.68■□□□□ 0.74
CBX4-201ENST00000269397 PEMTQ9UBM1 199 aa19.68■□□□□ 0.74
CBX4-201ENST00000269397 NF1P21359 2839 aa19.67■□□□□ 0.74
CBX4-201ENST00000269397 COX7A2LO14548 114 aa19.67■□□□□ 0.74
CBX4-201ENST00000269397 NTM-AS1Q6ZSK4 140 aa19.67■□□□□ 0.74
CBX4-201ENST00000269397 FAM240AA0A1B0GVK7 77 aa19.67■□□□□ 0.74
CBX4-201ENST00000269397 DSCR9P59020 149 aa19.66■□□□□ 0.74
CBX4-201ENST00000269397 LRRK2Q5S007 2527 aa19.65■□□□□ 0.74
CBX4-201ENST00000269397 DEFB114Q30KQ6 69 aa19.65■□□□□ 0.74
CBX4-201ENST00000269397 SVIPQ8NHG7 77 aa19.65■□□□□ 0.74
CBX4-201ENST00000269397 SONP18583 2426 aaKnown RBP19.64■□□□□ 0.74
CBX4-201ENST00000269397 J3QLI3 93 aa19.63■□□□□ 0.73
CBX4-201ENST00000269397 Q6ZTI0 123 aa19.63■□□□□ 0.73
CBX4-201ENST00000269397 C1orf158Q8N1D5 194 aa19.63■□□□□ 0.73
CBX4-201ENST00000269397 SHISA2Q6UWI4 295 aa19.62■□□□□ 0.73
CBX4-201ENST00000269397 MRPL23Q16540 153 aaKnown RBP19.62■□□□□ 0.73
CBX4-201ENST00000269397 ODF3L2Q3SX64 289 aa19.61■□□□□ 0.73
CBX4-201ENST00000269397 NAV2Q8IVL1 2488 aa19.61■□□□□ 0.73
CBX4-201ENST00000269397 C3orf56Q8N813 242 aa19.61■□□□□ 0.73
CBX4-201ENST00000269397 FAM218AQ96MZ4 157 aa19.61■□□□□ 0.73
CBX4-201ENST00000269397 RPL36AP83881 106 aaKnown RBP19.6■□□□□ 0.73
CBX4-201ENST00000269397 DAZ2Q13117 558 aaKnown RBP19.6■□□□□ 0.73
CBX4-201ENST00000269397 DAZ4Q86SG3 579 aaKnown RBP19.6■□□□□ 0.73
CBX4-201ENST00000269397 C11orf44Q8N8P7 122 aa19.6■□□□□ 0.73
CBX4-201ENST00000269397 RPL36ALQ969Q0 106 aaKnown RBP19.6■□□□□ 0.73
CBX4-201ENST00000269397 DAZ3Q9NR90 486 aaKnown RBP19.6■□□□□ 0.73
CBX4-201ENST00000269397 Q96MF0 132 aa19.6■□□□□ 0.73
CBX4-201ENST00000269397 SMCR5Q8TEV8 140 aa19.59■□□□□ 0.73
CBX4-201ENST00000269397 ZFYVE26Q68DK2 2539 aa19.59■□□□□ 0.73
CBX4-201ENST00000269397 F5H768 121 aa19.59■□□□□ 0.73
CBX4-201ENST00000269397 STHQ8IWL8 128 aa19.59■□□□□ 0.73
CBX4-201ENST00000269397 K7EQD1 137 aa19.58■□□□□ 0.73
CBX4-201ENST00000269397 CDC42SE2Q9NRR3 84 aa19.58■□□□□ 0.73
CBX4-201ENST00000269397 C4orf3Q8WVX3 66 aa19.58■□□□□ 0.72
CBX4-201ENST00000269397 BAALC-AS2P0C853 105 aa19.57■□□□□ 0.72
CBX4-201ENST00000269397 FSHBP01225 129 aa19.56■□□□□ 0.72
CBX4-201ENST00000269397 IGKV3OR2-268A0A0C4DH90 116 aa19.56■□□□□ 0.72
CBX4-201ENST00000269397 Q9HAA7 133 aa19.56■□□□□ 0.72
CBX4-201ENST00000269397 TRBV7-7A0A0K0K1E9 115 aa19.55■□□□□ 0.72
CBX4-201ENST00000269397 IGHV4-31P0DP07 118 aa19.55■□□□□ 0.72
CBX4-201ENST00000269397 SETXQ7Z333 2677 aaKnown RBP19.54■□□□□ 0.72
CBX4-201ENST00000269397 FAM236AA0A1B0GUQ0 79 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms