RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 PSMB8P28062 276 aa8.6□□□□□ -1.03
VPS33A-201ENST00000267199 PRB2P02812 416 aaPredicted RBP8.59□□□□□ -1.03
VPS33A-201ENST00000267199 SLPIP03973 132 aa8.59□□□□□ -1.03
VPS33A-201ENST00000267199 UBE2D1P51668 147 aa8.59□□□□□ -1.03
VPS33A-201ENST00000267199 DEFB113Q30KQ7 82 aa8.59□□□□□ -1.03
VPS33A-201ENST00000267199 LINC00308Q8TCZ7 52 aa8.59□□□□□ -1.03
VPS33A-201ENST00000267199 ZMAT4Q9H898 229 aa8.59□□□□□ -1.03
VPS33A-201ENST00000267199 TRBV27A0A0K0K1C4 114 aa8.59□□□□□ -1.03
VPS33A-201ENST00000267199 DAD1P61803 113 aa8.59□□□□□ -1.03
VPS33A-201ENST00000267199 TMEM89A2RUT3 159 aa8.59□□□□□ -1.03
VPS33A-201ENST00000267199 PRM2P04554 102 aa8.59□□□□□ -1.03
VPS33A-201ENST00000267199 POLR2KP53803 58 aaKnown RBP8.59□□□□□ -1.03
VPS33A-201ENST00000267199 Q6ZSV7 163 aa8.59□□□□□ -1.03
VPS33A-201ENST00000267199 CITED2Q99967 270 aaPredicted RBP8.59□□□□□ -1.03
VPS33A-201ENST00000267199 C20orf197Q8N268 126 aa8.58□□□□□ -1.04
VPS33A-201ENST00000267199 RNF152Q8N8N0 203 aa8.58□□□□□ -1.04
VPS33A-201ENST00000267199 TSPEAR-AS2P59090 65 aa8.58□□□□□ -1.04
VPS33A-201ENST00000267199 HIST2H2BDQ6DRA6 164 aa8.58□□□□□ -1.04
VPS33A-201ENST00000267199 TMEM263Q8WUH6 116 aaKnown RBP8.57□□□□□ -1.04
VPS33A-201ENST00000267199 C3orf22Q8N5N4 141 aa8.57□□□□□ -1.04
VPS33A-201ENST00000267199 H7C423 109 aa8.57□□□□□ -1.04
VPS33A-201ENST00000267199 DEFB105AQ8NG35 78 aa8.57□□□□□ -1.04
VPS33A-201ENST00000267199 A0A1W2PPR1 153 aa8.56□□□□□ -1.04
VPS33A-201ENST00000267199 GYPEP15421 78 aa8.56□□□□□ -1.04
VPS33A-201ENST00000267199 NCR3O14931 201 aa8.56□□□□□ -1.04
VPS33A-201ENST00000267199 TSHBP01222 138 aa8.56□□□□□ -1.04
VPS33A-201ENST00000267199 SPANXCQ9NY87 97 aa8.56□□□□□ -1.04
VPS33A-201ENST00000267199 ZNF580Q9UK33 172 aa8.56□□□□□ -1.04
VPS33A-201ENST00000267199 CDH23Q9H251 3354 aa8.56□□□□□ -1.04
VPS33A-201ENST00000267199 IGIPA6NJ69 53 aa8.56□□□□□ -1.04
VPS33A-201ENST00000267199 LST1O00453 97 aa8.56□□□□□ -1.04
VPS33A-201ENST00000267199 UBE2D3P61077 147 aa8.56□□□□□ -1.04
VPS33A-201ENST00000267199 UBE2D2P62837 147 aa8.56□□□□□ -1.04
VPS33A-201ENST00000267199 XIRP2A4UGR9 3374 aa8.55□□□□□ -1.04
VPS33A-201ENST00000267199 ZNF462Q96JM2 2506 aa8.55□□□□□ -1.04
VPS33A-201ENST00000267199 IGHV4-28A0A0C4DH34 117 aa8.55□□□□□ -1.04
VPS33A-201ENST00000267199 PCSK5Q92824 1860 aa8.55□□□□□ -1.04
VPS33A-201ENST00000267199 Q6ZTI0 123 aa8.55□□□□□ -1.04
VPS33A-201ENST00000267199 MAP6D1Q9H9H5 199 aa8.55□□□□□ -1.04
VPS33A-201ENST00000267199 ODF3Q96PU9 254 aa8.54□□□□□ -1.04
VPS33A-201ENST00000267199 ACANP16112 2415 aa8.54□□□□□ -1.04
VPS33A-201ENST00000267199 F8WEM9 126 aa8.54□□□□□ -1.04
VPS33A-201ENST00000267199 POM121L12Q8N7R1 296 aa8.54□□□□□ -1.04
VPS33A-201ENST00000267199 CDIP1Q9H305 208 aa8.54□□□□□ -1.04
VPS33A-201ENST00000267199 NDUFA7O95182 113 aa8.54□□□□□ -1.04
VPS33A-201ENST00000267199 IGLV4-69A0A075B6H9 119 aa8.54□□□□□ -1.04
VPS33A-201ENST00000267199 JMJD7-PLA2G4BH0Y9G9 81 aa8.54□□□□□ -1.04
VPS33A-201ENST00000267199 IGLV2-18A0A075B6J9 118 aa8.53□□□□□ -1.04
VPS33A-201ENST00000267199 CRYGDP07320 174 aa8.53□□□□□ -1.04
VPS33A-201ENST00000267199 TRBV6-5A0A0K0K1A5 114 aa8.53□□□□□ -1.04
VPS33A-201ENST00000267199 NKAPP1Q8N9T2 125 aa8.53□□□□□ -1.04
VPS33A-201ENST00000267199 TMEM258P61165 79 aa8.53□□□□□ -1.04
VPS33A-201ENST00000267199 PRORYQ9H606 182 aa8.53□□□□□ -1.04
VPS33A-201ENST00000267199 KLLNB2CW77 178 aa8.53□□□□□ -1.04
VPS33A-201ENST00000267199 TIRAPP58753 221 aa8.51□□□□□ -1.05
VPS33A-201ENST00000267199 COX8CQ7Z4L0 72 aa8.51□□□□□ -1.05
VPS33A-201ENST00000267199 C16orf74Q96GX8 76 aa8.51□□□□□ -1.05
VPS33A-201ENST00000267199 NDUFA1O15239 70 aa8.51□□□□□ -1.05
VPS33A-201ENST00000267199 LINC00694P0DN24 101 aa8.51□□□□□ -1.05
VPS33A-201ENST00000267199 EDN2P20800 178 aa8.51□□□□□ -1.05
VPS33A-201ENST00000267199 C4orf3Q8WVX3 66 aa8.51□□□□□ -1.05
VPS33A-201ENST00000267199 ENHOQ6UWT2 76 aa8.51□□□□□ -1.05
VPS33A-201ENST00000267199 WFDC11Q8NEX6 87 aa8.51□□□□□ -1.05
VPS33A-201ENST00000267199 EPG5Q9HCE0 2579 aa8.5□□□□□ -1.05
VPS33A-201ENST00000267199 DEFB4AO15263 64 aa8.5□□□□□ -1.05
VPS33A-201ENST00000267199 AVPP01185 164 aa8.5□□□□□ -1.05
VPS33A-201ENST00000267199 UPK3BQ9BT76 320 aa8.5□□□□□ -1.05
VPS33A-201ENST00000267199 SCXQ7RTU7 201 aa8.5□□□□□ -1.05
VPS33A-201ENST00000267199 DCANP1Q8TF63 244 aa8.5□□□□□ -1.05
VPS33A-201ENST00000267199 Q6YL49 198 aa8.49□□□□□ -1.05
VPS33A-201ENST00000267199 ANKRD17O75179 2603 aaKnown RBP8.49□□□□□ -1.05
VPS33A-201ENST00000267199 TMEM256-PLSCR3K7ERE1 68 aa8.49□□□□□ -1.05
VPS33A-201ENST00000267199 M0QXV9 152 aa8.49□□□□□ -1.05
VPS33A-201ENST00000267199 IGLV1-40P01703 118 aa8.49□□□□□ -1.05
VPS33A-201ENST00000267199 SMCPP49901 116 aaPredicted RBP8.49□□□□□ -1.05
VPS33A-201ENST00000267199 PSMG3-AS1Q96PY0 264 aa8.49□□□□□ -1.05
VPS33A-201ENST00000267199 USP17L23D6RBM5 183 aa8.49□□□□□ -1.05
VPS33A-201ENST00000267199 DEFB114Q30KQ6 69 aa8.49□□□□□ -1.05
VPS33A-201ENST00000267199 TRBV10-1A0A0K0K1A3 114 aa8.48□□□□□ -1.05
VPS33A-201ENST00000267199 ADAMTSL4-AS1Q5T5F5 129 aa8.48□□□□□ -1.05
VPS33A-201ENST00000267199 PYGO1Q9Y3Y4 419 aa8.48□□□□□ -1.05
VPS33A-201ENST00000267199 WDFY4Q6ZS81 3184 aa8.48□□□□□ -1.05
VPS33A-201ENST00000267199 BRK1Q8WUW1 75 aa8.48□□□□□ -1.05
VPS33A-201ENST00000267199 VPS13AQ96RL7 3174 aa8.48□□□□□ -1.05
VPS33A-201ENST00000267199 RPL18AQ02543 176 aaKnown RBP8.47□□□□□ -1.05
VPS33A-201ENST00000267199 KLK5Q9Y337 293 aaPredicted RBP8.47□□□□□ -1.05
VPS33A-201ENST00000267199 COX7CP15954 63 aa8.47□□□□□ -1.05
VPS33A-201ENST00000267199 APOC4P55056 127 aa8.47□□□□□ -1.05
VPS33A-201ENST00000267199 NREPQ16612 68 aa8.47□□□□□ -1.05
VPS33A-201ENST00000267199 FASNP49327 2511 aaKnown RBP8.47□□□□□ -1.05
VPS33A-201ENST00000267199 IGHV4-31P0DP07 118 aa8.47□□□□□ -1.05
VPS33A-201ENST00000267199 C5orf47Q569G3 176 aa8.47□□□□□ -1.05
VPS33A-201ENST00000267199 WFDC9Q8NEX5 89 aa8.47□□□□□ -1.05
VPS33A-201ENST00000267199 C9orf85Q96MD7 179 aa8.47□□□□□ -1.05
VPS33A-201ENST00000267199 IMUPQ9GZP8 106 aa8.47□□□□□ -1.05
VPS33A-201ENST00000267199 UBE2D4Q9Y2X8 147 aa8.47□□□□□ -1.05
VPS33A-201ENST00000267199 A0A087WVE0 104 aa8.46□□□□□ -1.05
VPS33A-201ENST00000267199 DNAJC9-AS1A6NH13 148 aa8.46□□□□□ -1.05
VPS33A-201ENST00000267199 J3QKU1 62 aa8.46□□□□□ -1.05
VPS33A-201ENST00000267199 SPAG11BQ08648 103 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms