RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 SLURP1P55000 103 aa11.2□□□□□ -0.62
CASC3-201ENST00000264645 FAM19A5Q7Z5A7 132 aaPredicted RBP11.2□□□□□ -0.62
CASC3-201ENST00000264645 ODF3Q96PU9 254 aa11.2□□□□□ -0.62
CASC3-201ENST00000264645 ADAMTSL4-AS1Q5T5F5 129 aa11.2□□□□□ -0.62
CASC3-201ENST00000264645 PIEZO1Q92508 2521 aa11.19□□□□□ -0.62
CASC3-201ENST00000264645 DAD1P61803 113 aa11.19□□□□□ -0.62
CASC3-201ENST00000264645 EBI3Q14213 229 aa11.19□□□□□ -0.62
CASC3-201ENST00000264645 PIP4P1Q86T03 277 aa11.19□□□□□ -0.62
CASC3-201ENST00000264645 NDUFA1O15239 70 aa11.19□□□□□ -0.62
CASC3-201ENST00000264645 HRCT1Q6UXD1 115 aa11.19□□□□□ -0.62
CASC3-201ENST00000264645 LRRC75A-AS1Q8N1F1 130 aa11.19□□□□□ -0.62
CASC3-201ENST00000264645 ANKRD11Q6UB99 2663 aaPredicted RBP11.19□□□□□ -0.62
CASC3-201ENST00000264645 IGHV4-61A0A0C4DH41 118 aa11.19□□□□□ -0.62
CASC3-201ENST00000264645 CITED2Q99967 270 aaPredicted RBP11.19□□□□□ -0.62
CASC3-201ENST00000264645 NBL1P41271 181 aa11.18□□□□□ -0.62
CASC3-201ENST00000264645 ENHOQ6UWT2 76 aa11.18□□□□□ -0.62
CASC3-201ENST00000264645 LINC00526Q96FQ7 95 aa11.17□□□□□ -0.62
CASC3-201ENST00000264645 A0A087WVE0 104 aa11.17□□□□□ -0.62
CASC3-201ENST00000264645 K7EQD1 137 aa11.17□□□□□ -0.62
CASC3-201ENST00000264645 DEFB112Q30KQ8 113 aa11.17□□□□□ -0.62
CASC3-201ENST00000264645 FAM236DA0A1B0GTK5 79 aa11.17□□□□□ -0.62
CASC3-201ENST00000264645 K7ENP7 123 aa11.17□□□□□ -0.62
CASC3-201ENST00000264645 FAM236CP0DP71 79 aa11.17□□□□□ -0.62
CASC3-201ENST00000264645 UPK3BQ9BT76 320 aa11.17□□□□□ -0.62
CASC3-201ENST00000264645 PYGO1Q9Y3Y4 419 aa11.17□□□□□ -0.62
CASC3-201ENST00000264645 IGLV10-54A0A075B6I4 117 aa11.16□□□□□ -0.62
CASC3-201ENST00000264645 ANGP03950 147 aaKnown RBP11.16□□□□□ -0.62
CASC3-201ENST00000264645 PRM2P04554 102 aa11.16□□□□□ -0.62
CASC3-201ENST00000264645 ELANEP08246 267 aa11.16□□□□□ -0.62
CASC3-201ENST00000264645 GNLYP22749 145 aa11.16□□□□□ -0.62
CASC3-201ENST00000264645 F5H768 121 aa11.16□□□□□ -0.62
CASC3-201ENST00000264645 TNFRSF13BO14836 293 aaPredicted RBP11.16□□□□□ -0.62
CASC3-201ENST00000264645 FHL3Q13643 280 aa11.16□□□□□ -0.62
CASC3-201ENST00000264645 MRPS36P82909 103 aaKnown RBP11.15□□□□□ -0.62
CASC3-201ENST00000264645 Q8N6K4 173 aa11.15□□□□□ -0.62
CASC3-201ENST00000264645 KLLNB2CW77 178 aa11.15□□□□□ -0.63
CASC3-201ENST00000264645 PRB2P02812 416 aaPredicted RBP11.15□□□□□ -0.63
CASC3-201ENST00000264645 A0A0U1RQV1 116 aa11.14□□□□□ -0.63
CASC3-201ENST00000264645 TMEM256-PLSCR3K7ERE1 68 aa11.14□□□□□ -0.63
CASC3-201ENST00000264645 TIMM17BO60830 172 aa11.13□□□□□ -0.63
CASC3-201ENST00000264645 WFDC9Q8NEX5 89 aa11.13□□□□□ -0.63
CASC3-201ENST00000264645 CSDC2Q9Y534 153 aaKnown RBP11.13□□□□□ -0.63
CASC3-201ENST00000264645 K7EQG2 157 aa11.12□□□□□ -0.63
CASC3-201ENST00000264645 Q8NA96 180 aa11.12□□□□□ -0.63
CASC3-201ENST00000264645 LINC01546A6NGU7 62 aa11.12□□□□□ -0.63
CASC3-201ENST00000264645 CXCL5P42830 114 aa11.12□□□□□ -0.63
CASC3-201ENST00000264645 CMC4P56277 68 aaPredicted RBP11.12□□□□□ -0.63
CASC3-201ENST00000264645 LINC01356Q8N9X3 169 aa11.12□□□□□ -0.63
CASC3-201ENST00000264645 ABCA12Q86UK0 2595 aa11.11□□□□□ -0.63
CASC3-201ENST00000264645 XIRP2A4UGR9 3374 aa11.11□□□□□ -0.63
CASC3-201ENST00000264645 WFDC11Q8NEX6 87 aa11.11□□□□□ -0.63
CASC3-201ENST00000264645 MPLKIPQ8TAP9 179 aa11.11□□□□□ -0.63
CASC3-201ENST00000264645 UBE2D4Q9Y2X8 147 aa11.1□□□□□ -0.63
CASC3-201ENST00000264645 RNF223E7ERA6 249 aa11.1□□□□□ -0.63
CASC3-201ENST00000264645 LMO4P61968 165 aa11.1□□□□□ -0.63
CASC3-201ENST00000264645 C9orf85Q96MD7 179 aa11.09□□□□□ -0.63
CASC3-201ENST00000264645 SCXQ7RTU7 201 aa11.09□□□□□ -0.63
CASC3-201ENST00000264645 NDUFC2O95298 119 aa11.08□□□□□ -0.64
CASC3-201ENST00000264645 Q6ZTI0 123 aa11.08□□□□□ -0.64
CASC3-201ENST00000264645 NRGNQ92686 78 aa11.08□□□□□ -0.64
CASC3-201ENST00000264645 SNURFQ9Y675 71 aa11.08□□□□□ -0.64
CASC3-201ENST00000264645 SBSPONQ8IVN8 264 aa11.08□□□□□ -0.64
CASC3-201ENST00000264645 ZNF561-AS1K7EIQ3 104 aa11.08□□□□□ -0.64
CASC3-201ENST00000264645 SMIM11BQ8TCY0 68 aa11.08□□□□□ -0.64
CASC3-201ENST00000264645 ZNF462Q96JM2 2506 aa11.08□□□□□ -0.64
CASC3-201ENST00000264645 DSCR9P59020 149 aa11.07□□□□□ -0.64
CASC3-201ENST00000264645 IGHV4-30-2A0A087WSY4 118 aa11.07□□□□□ -0.64
CASC3-201ENST00000264645 TRBV7-7A0A0K0K1E9 115 aa11.07□□□□□ -0.64
CASC3-201ENST00000264645 IGHV4-28A0A0C4DH34 117 aa11.07□□□□□ -0.64
CASC3-201ENST00000264645 ADORA2A-AS1P86434 159 aa11.07□□□□□ -0.64
CASC3-201ENST00000264645 C10orf99Q6UWK7 81 aa11.07□□□□□ -0.64
CASC3-201ENST00000264645 DEFB105AQ8NG35 78 aa11.07□□□□□ -0.64
CASC3-201ENST00000264645 RAI1Q7Z5J4 1906 aaPredicted RBP11.06□□□□□ -0.64
CASC3-201ENST00000264645 EDN2P20800 178 aa11.06□□□□□ -0.64
CASC3-201ENST00000264645 TRBV10-1A0A0K0K1A3 114 aa11.06□□□□□ -0.64
CASC3-201ENST00000264645 NHLRC4P0CG21 123 aaPredicted RBP11.06□□□□□ -0.64
CASC3-201ENST00000264645 CHD9Q3L8U1 2897 aa11.06□□□□□ -0.64
CASC3-201ENST00000264645 GYPEP15421 78 aa11.06□□□□□ -0.64
CASC3-201ENST00000264645 A6NDX4 124 aa11.05□□□□□ -0.64
CASC3-201ENST00000264645 JMJD1CQ15652 2540 aa11.04□□□□□ -0.64
CASC3-201ENST00000264645 NREPQ16612 68 aa11.04□□□□□ -0.64
CASC3-201ENST00000264645 ESM1Q9NQ30 184 aa11.04□□□□□ -0.64
CASC3-201ENST00000264645 Q6JHZ5 121 aa11.04□□□□□ -0.64
CASC3-201ENST00000264645 DCANP1Q8TF63 244 aa11.04□□□□□ -0.64
CASC3-201ENST00000264645 LINC00242Q5T6M2 205 aa11.03□□□□□ -0.64
CASC3-201ENST00000264645 ATP5EP2Q5VTU8 51 aa11.03□□□□□ -0.64
CASC3-201ENST00000264645 KIF25-AS1Q9Y6Z4 181 aa11.02□□□□□ -0.64
CASC3-201ENST00000264645 FAM222AQ5U5X8 452 aa11.02□□□□□ -0.65
CASC3-201ENST00000264645 VPS13AQ96RL7 3174 aa11.01□□□□□ -0.65
CASC3-201ENST00000264645 IBA57-AS1B1ANH7 110 aa11.01□□□□□ -0.65
CASC3-201ENST00000264645 C6orf99Q4VX62 202 aa11.01□□□□□ -0.65
CASC3-201ENST00000264645 DPH3Q96FX2 82 aa11.01□□□□□ -0.65
CASC3-201ENST00000264645 MAP6D1Q9H9H5 199 aa11.01□□□□□ -0.65
CASC3-201ENST00000264645 FREM2Q5SZK8 3169 aa11.01□□□□□ -0.65
CASC3-201ENST00000264645 FBXL19-AS1Q494R0 122 aa11.01□□□□□ -0.65
CASC3-201ENST00000264645 COX6A2Q02221 97 aa11.01□□□□□ -0.65
CASC3-201ENST00000264645 AMELXQ99217 191 aa11.01□□□□□ -0.65
CASC3-201ENST00000264645 CHD8Q9HCK8 2581 aa11□□□□□ -0.65
CASC3-201ENST00000264645 IGF2-ASQ6U949 168 aa11□□□□□ -0.65
CASC3-201ENST00000264645 NBEAQ8NFP9 2946 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms