RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 TSHBP01222 138 aa8.95□□□□□ -0.98
SMG6-201ENST00000263073 CCKP06307 115 aa8.95□□□□□ -0.98
SMG6-201ENST00000263073 CRIP2P52943 208 aaPredicted RBP8.95□□□□□ -0.98
SMG6-201ENST00000263073 SPRY4Q9C004 299 aa8.95□□□□□ -0.98
SMG6-201ENST00000263073 USP17L23D6RBM5 183 aa8.95□□□□□ -0.98
SMG6-201ENST00000263073 C18orf65Q6ZTR6 163 aa8.94□□□□□ -0.98
SMG6-201ENST00000263073 WFDC10AQ9H1F0 79 aa8.94□□□□□ -0.98
SMG6-201ENST00000263073 PPDPFQ9H3Y8 114 aa8.94□□□□□ -0.98
SMG6-201ENST00000263073 K7EQG2 157 aa8.94□□□□□ -0.98
SMG6-201ENST00000263073 WFDC13Q8IUB5 93 aa8.94□□□□□ -0.98
SMG6-201ENST00000263073 FAM30AQ9NZY2 134 aa8.94□□□□□ -0.98
SMG6-201ENST00000263073 RNASE3P12724 160 aaKnown RBP8.94□□□□□ -0.98
SMG6-201ENST00000263073 LMO4P61968 165 aa8.94□□□□□ -0.98
SMG6-201ENST00000263073 UFSP1Q6NVU6 142 aa8.94□□□□□ -0.98
SMG6-201ENST00000263073 SMIM11BQ8TCY0 68 aa8.93□□□□□ -0.98
SMG6-201ENST00000263073 URB1-AS1Q96HZ7 61 aa8.93□□□□□ -0.98
SMG6-201ENST00000263073 FAM240AA0A1B0GVK7 77 aa8.93□□□□□ -0.98
SMG6-201ENST00000263073 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.93□□□□□ -0.98
SMG6-201ENST00000263073 EDN2P20800 178 aa8.93□□□□□ -0.98
SMG6-201ENST00000263073 MRPL55Q7Z7F7 128 aaKnown RBP8.93□□□□□ -0.98
SMG6-201ENST00000263073 M0QXV9 152 aa8.93□□□□□ -0.98
SMG6-201ENST00000263073 ZFHX2Q9C0A1 2572 aaPredicted RBP8.92□□□□□ -0.98
SMG6-201ENST00000263073 PDE6GP18545 87 aa8.92□□□□□ -0.98
SMG6-201ENST00000263073 SEC61GP60059 68 aa8.92□□□□□ -0.98
SMG6-201ENST00000263073 PRR14LQ5THK1 2151 aa8.92□□□□□ -0.98
SMG6-201ENST00000263073 IGHV4-30-4P0DP06 118 aa8.92□□□□□ -0.98
SMG6-201ENST00000263073 IGHV4-31P0DP07 118 aa8.92□□□□□ -0.98
SMG6-201ENST00000263073 B9D2Q9BPU9 175 aa8.92□□□□□ -0.98
SMG6-201ENST00000263073 LINC00574Q9H8X3 128 aa8.92□□□□□ -0.98
SMG6-201ENST00000263073 DEFB114Q30KQ6 69 aa8.92□□□□□ -0.98
SMG6-201ENST00000263073 A0A087WVE0 104 aa8.91□□□□□ -0.98
SMG6-201ENST00000263073 Q6ZQY7 126 aa8.91□□□□□ -0.98
SMG6-201ENST00000263073 TRBV6-8A0A0A6YYG3 113 aa8.91□□□□□ -0.98
SMG6-201ENST00000263073 TIMM17BO60830 172 aa8.91□□□□□ -0.98
SMG6-201ENST00000263073 SERP2Q8N6R1 65 aa8.91□□□□□ -0.98
SMG6-201ENST00000263073 BBC3Q96PG8 261 aaPredicted RBP8.91□□□□□ -0.98
SMG6-201ENST00000263073 RPL37AP8A6NKH3 93 aa8.91□□□□□ -0.98
SMG6-201ENST00000263073 LST1O00453 97 aa8.91□□□□□ -0.98
SMG6-201ENST00000263073 V9GYY9 64 aa8.9□□□□□ -0.98
SMG6-201ENST00000263073 A0A087WZ39 114 aa8.9□□□□□ -0.98
SMG6-201ENST00000263073 C4orf48Q5BLP8 95 aa8.9□□□□□ -0.98
SMG6-201ENST00000263073 IBA57-AS1B1ANH7 110 aa8.9□□□□□ -0.98
SMG6-201ENST00000263073 CRYGDP07320 174 aa8.9□□□□□ -0.98
SMG6-201ENST00000263073 LY6LH3BQJ8 138 aa8.9□□□□□ -0.99
SMG6-201ENST00000263073 CASC2Q6XLA1 102 aa8.89□□□□□ -0.99
SMG6-201ENST00000263073 C11orf45Q8TAV5 145 aa8.89□□□□□ -0.99
SMG6-201ENST00000263073 NANOS2P60321 138 aaKnown RBP8.89□□□□□ -0.99
SMG6-201ENST00000263073 CELA1Q9UNI1 258 aa8.89□□□□□ -0.99
SMG6-201ENST00000263073 UBE2D4Q9Y2X8 147 aa8.89□□□□□ -0.99
SMG6-201ENST00000263073 SOSTDC1Q6X4U4 206 aa8.89□□□□□ -0.99
SMG6-201ENST00000263073 ARHGAP32A7KAX9 2087 aa8.89□□□□□ -0.99
SMG6-201ENST00000263073 TRBV27A0A0K0K1C4 114 aa8.89□□□□□ -0.99
SMG6-201ENST00000263073 COX7CP15954 63 aa8.89□□□□□ -0.99
SMG6-201ENST00000263073 ZNF580Q9UK33 172 aa8.88□□□□□ -0.99
SMG6-201ENST00000263073 HCFC1P51610 2035 aa8.88□□□□□ -0.99
SMG6-201ENST00000263073 SPINK6Q6UWN8 80 aa8.88□□□□□ -0.99
SMG6-201ENST00000263073 TMEM89A2RUT3 159 aa8.87□□□□□ -0.99
SMG6-201ENST00000263073 KLK5Q9Y337 293 aaPredicted RBP8.87□□□□□ -0.99
SMG6-201ENST00000263073 TNFRSF13BO14836 293 aaPredicted RBP8.87□□□□□ -0.99
SMG6-201ENST00000263073 ODF3Q96PU9 254 aa8.87□□□□□ -0.99
SMG6-201ENST00000263073 PRO3102Q9H379 93 aa8.87□□□□□ -0.99
SMG6-201ENST00000263073 DAZAP2Q15038 168 aaPredicted RBP8.86□□□□□ -0.99
SMG6-201ENST00000263073 TSPEAR-AS2P59090 65 aa8.86□□□□□ -0.99
SMG6-201ENST00000263073 PRR3P79522 188 aaKnown RBP8.86□□□□□ -0.99
SMG6-201ENST00000263073 A6NED7 52 aa8.86□□□□□ -0.99
SMG6-201ENST00000263073 ATP5EP2Q5VTU8 51 aa8.86□□□□□ -0.99
SMG6-201ENST00000263073 Q6Q795 121 aa8.85□□□□□ -0.99
SMG6-201ENST00000263073 UBE2D1P51668 147 aa8.85□□□□□ -0.99
SMG6-201ENST00000263073 Q6YL49 198 aa8.85□□□□□ -0.99
SMG6-201ENST00000263073 C9orf116Q5BN46 136 aaPredicted RBP8.84□□□□□ -0.99
SMG6-201ENST00000263073 DEFB131BA0A096LNP1 70 aa8.84□□□□□ -0.99
SMG6-201ENST00000263073 FAM208BQ5VWN6 2430 aa8.84□□□□□ -0.99
SMG6-201ENST00000263073 COX6A2Q02221 97 aa8.84□□□□□ -0.99
SMG6-201ENST00000263073 FAM19A3Q7Z5A8 133 aa8.83□□□□□ -1
SMG6-201ENST00000263073 A0A087WYN8 130 aa8.83□□□□□ -1
SMG6-201ENST00000263073 PTPRQQ9UMZ3 2332 aa8.83□□□□□ -1
SMG6-201ENST00000263073 LINC00959A0A1B0GUT2 108 aa8.83□□□□□ -1
SMG6-201ENST00000263073 POLR2KP53803 58 aaKnown RBP8.83□□□□□ -1
SMG6-201ENST00000263073 C9orf85Q96MD7 179 aa8.83□□□□□ -1
SMG6-201ENST00000263073 C1orf195Q5TG92 126 aa8.82□□□□□ -1
SMG6-201ENST00000263073 IGLV2-18A0A075B6J9 118 aa8.82□□□□□ -1
SMG6-201ENST00000263073 IGF2-ASQ6U949 168 aa8.82□□□□□ -1
SMG6-201ENST00000263073 PYGO1Q9Y3Y4 419 aa8.82□□□□□ -1
SMG6-201ENST00000263073 LOC107984640A0A0U1RRK4 108 aa8.82□□□□□ -1
SMG6-201ENST00000263073 IGLV4-69A0A075B6H9 119 aa8.82□□□□□ -1
SMG6-201ENST00000263073 PCNTO95613 3336 aa8.81□□□□□ -1
SMG6-201ENST00000263073 ADAMTSL4-AS1Q5T5F5 129 aa8.81□□□□□ -1
SMG6-201ENST00000263073 IGLV9-49A0A0B4J1Y8 123 aa8.8□□□□□ -1
SMG6-201ENST00000263073 IGIPA6NJ69 53 aa8.8□□□□□ -1
SMG6-201ENST00000263073 TRBV6-4A0A1B0GX49 114 aa8.8□□□□□ -1
SMG6-201ENST00000263073 SYCNQ0VAF6 134 aa8.8□□□□□ -1
SMG6-201ENST00000263073 IMUPQ9GZP8 106 aa8.8□□□□□ -1
SMG6-201ENST00000263073 LYRM9A8MSI8 78 aa8.79□□□□□ -1
SMG6-201ENST00000263073 M0R2N4 97 aa8.79□□□□□ -1
SMG6-201ENST00000263073 FBXL19-AS1Q494R0 122 aa8.79□□□□□ -1
SMG6-201ENST00000263073 ATG2AQ2TAZ0 1938 aa8.79□□□□□ -1
SMG6-201ENST00000263073 EBI3Q14213 229 aa8.79□□□□□ -1
SMG6-201ENST00000263073 KLLNB2CW77 178 aa8.79□□□□□ -1
SMG6-201ENST00000263073 INAFM1C9JVW0 142 aa8.79□□□□□ -1
SMG6-201ENST00000263073 SPG11Q96JI7 2443 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms