RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 CRIP3Q6Q6R5 217 aa9.05□□□□□ -0.96
SPG11-201ENST00000261866 TP73-AS1Q9UF72 201 aa9.05□□□□□ -0.96
SPG11-201ENST00000261866 C19orf71A6NCJ1 209 aa9.05□□□□□ -0.96
SPG11-201ENST00000261866 NDUFC2O95298 119 aa9.05□□□□□ -0.96
SPG11-201ENST00000261866 MED14OSP0DP75 135 aa9.05□□□□□ -0.96
SPG11-201ENST00000261866 ODF1Q14990 250 aa9.05□□□□□ -0.96
SPG11-201ENST00000261866 H0YGX0 51 aa9.04□□□□□ -0.96
SPG11-201ENST00000261866 BPY2O14599 106 aa9.04□□□□□ -0.96
SPG11-201ENST00000261866 CXCL5P42830 114 aa9.04□□□□□ -0.96
SPG11-201ENST00000261866 SPG11Q96JI7 2443 aa9.04□□□□□ -0.96
SPG11-201ENST00000261866 BRI3O95415 125 aa9.04□□□□□ -0.96
SPG11-201ENST00000261866 PIK3CD-AS1Q5SR53 167 aa9.04□□□□□ -0.96
SPG11-201ENST00000261866 E9PLD3 99 aa9.04□□□□□ -0.96
SPG11-201ENST00000261866 C14orf177Q52M58 125 aa9.04□□□□□ -0.96
SPG11-201ENST00000261866 ZFAND3Q9H8U3 227 aa9.03□□□□□ -0.96
SPG11-201ENST00000261866 KPRPQ5T749 579 aaPredicted RBP9.03□□□□□ -0.96
SPG11-201ENST00000261866 CDKN2A-AS1Q9UH64 79 aa9.03□□□□□ -0.96
SPG11-201ENST00000261866 TMEM256-PLSCR3K7ERE1 68 aa9.02□□□□□ -0.96
SPG11-201ENST00000261866 GOLGB1Q14789 3259 aaKnown RBP9.02□□□□□ -0.96
SPG11-201ENST00000261866 LINC01620Q4KN68 170 aa9.02□□□□□ -0.97
SPG11-201ENST00000261866 TRAV10A0A0B4J240 114 aa9.02□□□□□ -0.97
SPG11-201ENST00000261866 CSPG4Q6UVK1 2322 aa9.02□□□□□ -0.97
SPG11-201ENST00000261866 PSMG3-AS1Q96PY0 264 aa9.02□□□□□ -0.97
SPG11-201ENST00000261866 MIFP14174 115 aa9.01□□□□□ -0.97
SPG11-201ENST00000261866 WFDC13Q8IUB5 93 aa9.01□□□□□ -0.97
SPG11-201ENST00000261866 IGLV2-8P01709 118 aa9.01□□□□□ -0.97
SPG11-201ENST00000261866 P0C879 139 aa9.01□□□□□ -0.97
SPG11-201ENST00000261866 CRIP1P50238 77 aa9.01□□□□□ -0.97
SPG11-201ENST00000261866 TRBV6-8A0A0A6YYG3 113 aa9.01□□□□□ -0.97
SPG11-201ENST00000261866 ENHOQ6UWT2 76 aa9.01□□□□□ -0.97
SPG11-201ENST00000261866 C7orf33Q8WU49 177 aa9.01□□□□□ -0.97
SPG11-201ENST00000261866 C11orf1Q9H5F2 150 aa9□□□□□ -0.97
SPG11-201ENST00000261866 SMIM9A6NGZ8 99 aa9□□□□□ -0.97
SPG11-201ENST00000261866 PRR9Q5T870 116 aa9□□□□□ -0.97
SPG11-201ENST00000261866 ZNF295-AS1Q8N0V1 137 aa9□□□□□ -0.97
SPG11-201ENST00000261866 SNURFQ9Y675 71 aa9□□□□□ -0.97
SPG11-201ENST00000261866 A0A0J9YXY3 114 aa9□□□□□ -0.97
SPG11-201ENST00000261866 LINC00574Q9H8X3 128 aa8.99□□□□□ -0.97
SPG11-201ENST00000261866 NDUFV3P56181 108 aaKnown RBP8.99□□□□□ -0.97
SPG11-201ENST00000261866 ATOX1O00244 68 aa8.99□□□□□ -0.97
SPG11-201ENST00000261866 UFSP1Q6NVU6 142 aa8.99□□□□□ -0.97
SPG11-201ENST00000261866 FAM30AQ9NZY2 134 aa8.98□□□□□ -0.97
SPG11-201ENST00000261866 K7ERS5 55 aa8.98□□□□□ -0.97
SPG11-201ENST00000261866 HCFC1P51610 2035 aa8.98□□□□□ -0.97
SPG11-201ENST00000261866 UBE2D2P62837 147 aa8.98□□□□□ -0.97
SPG11-201ENST00000261866 IGLV2-11P01706 119 aa8.98□□□□□ -0.97
SPG11-201ENST00000261866 TEN1Q86WV5 123 aa8.98□□□□□ -0.97
SPG11-201ENST00000261866 PRRC2AP48634 2157 aaKnown RBP8.98□□□□□ -0.97
SPG11-201ENST00000261866 MIAQ16674 131 aa8.98□□□□□ -0.97
SPG11-201ENST00000261866 HIVEP3Q5T1R4 2406 aa8.97□□□□□ -0.97
SPG11-201ENST00000261866 EIF4EBP1Q13541 118 aaPredicted RBP8.97□□□□□ -0.97
SPG11-201ENST00000261866 CIRBP-AS1Q8TBR5 109 aa8.97□□□□□ -0.97
SPG11-201ENST00000261866 C20orf197Q8N268 126 aa8.97□□□□□ -0.97
SPG11-201ENST00000261866 IGLV4-3A0A075B6K6 122 aa8.97□□□□□ -0.97
SPG11-201ENST00000261866 M0QY20 66 aa8.96□□□□□ -0.97
SPG11-201ENST00000261866 IGLC6P0CF74 106 aa8.96□□□□□ -0.98
SPG11-201ENST00000261866 SYCNQ0VAF6 134 aa8.96□□□□□ -0.98
SPG11-201ENST00000261866 TCL1BO95988 128 aa8.95□□□□□ -0.98
SPG11-201ENST00000261866 EBI3Q14213 229 aa8.95□□□□□ -0.98
SPG11-201ENST00000261866 ATG2AQ2TAZ0 1938 aa8.95□□□□□ -0.98
SPG11-201ENST00000261866 ODF3Q96PU9 254 aa8.95□□□□□ -0.98
SPG11-201ENST00000261866 KIR2DL5BA0A0G2JN68 375 aa8.94□□□□□ -0.98
SPG11-201ENST00000261866 KIR2DL5BA0A0G2JPC4 375 aa8.94□□□□□ -0.98
SPG11-201ENST00000261866 JMJD7-PLA2G4BH0Y9G9 81 aa8.94□□□□□ -0.98
SPG11-201ENST00000261866 KIR2DL5AQ8N109 375 aa8.94□□□□□ -0.98
SPG11-201ENST00000261866 RBX1P62877 108 aa8.94□□□□□ -0.98
SPG11-201ENST00000261866 SONP18583 2426 aaKnown RBP8.93□□□□□ -0.98
SPG11-201ENST00000261866 A0A1W2PPR1 153 aa8.93□□□□□ -0.98
SPG11-201ENST00000261866 GAS8-AS1O95177 125 aa8.93□□□□□ -0.98
SPG11-201ENST00000261866 SPINK1P00995 79 aa8.93□□□□□ -0.98
SPG11-201ENST00000261866 KIR2DL5BQ8NHK3 375 aa8.93□□□□□ -0.98
SPG11-201ENST00000261866 C11orf21Q9P2W6 132 aa8.93□□□□□ -0.98
SPG11-201ENST00000261866 A0A1B0GXF2 115 aa8.93□□□□□ -0.98
SPG11-201ENST00000261866 ZNF22P17026 224 aaPredicted RBP8.93□□□□□ -0.98
SPG11-201ENST00000261866 TMEM223A0PJW6 202 aa8.92□□□□□ -0.98
SPG11-201ENST00000261866 FAM236DA0A1B0GTK5 79 aa8.92□□□□□ -0.98
SPG11-201ENST00000261866 TAX1BP3O14907 124 aa8.92□□□□□ -0.98
SPG11-201ENST00000261866 FAM236CP0DP71 79 aa8.92□□□□□ -0.98
SPG11-201ENST00000261866 RNF185Q96GF1 192 aa8.92□□□□□ -0.98
SPG11-201ENST00000261866 TRBV6-4A0A1B0GX49 114 aa8.92□□□□□ -0.98
SPG11-201ENST00000261866 NDUFA7O95182 113 aa8.92□□□□□ -0.98
SPG11-201ENST00000261866 Q6ZVQ6 151 aa8.92□□□□□ -0.98
SPG11-201ENST00000261866 ACACBO00763 2458 aa8.91□□□□□ -0.98
SPG11-201ENST00000261866 Q8N6K4 173 aa8.91□□□□□ -0.98
SPG11-201ENST00000261866 RAI1Q7Z5J4 1906 aaPredicted RBP8.91□□□□□ -0.98
SPG11-201ENST00000261866 CCKP06307 115 aa8.91□□□□□ -0.98
SPG11-201ENST00000261866 RNASE3P12724 160 aaKnown RBP8.91□□□□□ -0.98
SPG11-201ENST00000261866 SPANXCQ9NY87 97 aa8.91□□□□□ -0.98
SPG11-201ENST00000261866 J3KT08 172 aa8.91□□□□□ -0.98
SPG11-201ENST00000261866 MAPKAPK5-AS1Q8N8E1 139 aa8.91□□□□□ -0.98
SPG11-201ENST00000261866 IGLV1-40P01703 118 aa8.91□□□□□ -0.98
SPG11-201ENST00000261866 PLAC8L1A1L4L8 177 aa8.9□□□□□ -0.98
SPG11-201ENST00000261866 SERP1Q9Y6X1 66 aa8.9□□□□□ -0.98
SPG11-201ENST00000261866 C6orf99Q4VX62 202 aa8.9□□□□□ -0.99
SPG11-201ENST00000261866 G3V4G9 280 aa8.89□□□□□ -0.99
SPG11-201ENST00000261866 MBD6Q96DN6 1003 aa8.89□□□□□ -0.99
SPG11-201ENST00000261866 MUC22E2RYF6 1773 aaPredicted RBP8.89□□□□□ -0.99
SPG11-201ENST00000261866 A6NED7 52 aa8.89□□□□□ -0.99
SPG11-201ENST00000261866 TSHBP01222 138 aa8.89□□□□□ -0.99
SPG11-201ENST00000261866 PIEZO2Q9H5I5 2752 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms