RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 ORMDL2Q53FV1 153 aa10.78□□□□□ -0.68
CCDC90B-201ENST00000260054 Q8N3U1 123 aa10.78□□□□□ -0.68
CCDC90B-201ENST00000260054 C20orf203Q8NBC4 194 aa10.78□□□□□ -0.68
CCDC90B-201ENST00000260054 RPL39P62891 51 aaKnown RBP10.77□□□□□ -0.69
CCDC90B-201ENST00000260054 LINC00476Q8WZB0 136 aa10.77□□□□□ -0.69
CCDC90B-201ENST00000260054 VPS13DQ5THJ4 4388 aa10.77□□□□□ -0.69
CCDC90B-201ENST00000260054 C3orf79P0CE67 100 aa10.76□□□□□ -0.69
CCDC90B-201ENST00000260054 HNRNPA3P51991 378 aaKnown RBP10.76□□□□□ -0.69
CCDC90B-201ENST00000260054 CHCHD1Q96BP2 118 aaKnown RBP10.76□□□□□ -0.69
CCDC90B-201ENST00000260054 Q9H8V8 135 aa10.76□□□□□ -0.69
CCDC90B-201ENST00000260054 TMEM262E9PQX1 116 aa10.76□□□□□ -0.69
CCDC90B-201ENST00000260054 UBE2L6O14933 153 aa10.76□□□□□ -0.69
CCDC90B-201ENST00000260054 SIVA1O15304 175 aa10.76□□□□□ -0.69
CCDC90B-201ENST00000260054 LY6G6CO95867 125 aa10.76□□□□□ -0.69
CCDC90B-201ENST00000260054 BATFQ16520 125 aa10.76□□□□□ -0.69
CCDC90B-201ENST00000260054 MPV17L2Q567V2 206 aa10.76□□□□□ -0.69
CCDC90B-201ENST00000260054 DNAH1Q9P2D7 4330 aa10.75□□□□□ -0.69
CCDC90B-201ENST00000260054 A0A096LNJ9 63 aa10.75□□□□□ -0.69
CCDC90B-201ENST00000260054 DNAH10OSP0CZ25 163 aa10.75□□□□□ -0.69
CCDC90B-201ENST00000260054 C2orf66Q6UXQ4 117 aa10.75□□□□□ -0.69
CCDC90B-201ENST00000260054 H7C423 109 aa10.74□□□□□ -0.69
CCDC90B-201ENST00000260054 FGF6P10767 208 aa10.74□□□□□ -0.69
CCDC90B-201ENST00000260054 LINC01556Q5JQF7 62 aa10.74□□□□□ -0.69
CCDC90B-201ENST00000260054 Q6ZN92 141 aa10.74□□□□□ -0.69
CCDC90B-201ENST00000260054 ORAOV1Q8WV07 137 aa10.74□□□□□ -0.69
CCDC90B-201ENST00000260054 A0A087WX48 190 aa10.73□□□□□ -0.69
CCDC90B-201ENST00000260054 IGHV3-30P01768 117 aa10.73□□□□□ -0.69
CCDC90B-201ENST00000260054 IGHV3-33P01772 117 aa10.73□□□□□ -0.69
CCDC90B-201ENST00000260054 IGHV3-30-3P0DP02 117 aa10.73□□□□□ -0.69
CCDC90B-201ENST00000260054 IGHV3-30-5P0DP03 117 aa10.73□□□□□ -0.69
CCDC90B-201ENST00000260054 RBX1P62877 108 aa10.73□□□□□ -0.69
CCDC90B-201ENST00000260054 CYSLTR1Q9Y271 337 aa10.73□□□□□ -0.69
CCDC90B-201ENST00000260054 UBE2D4Q9Y2X8 147 aa10.73□□□□□ -0.69
CCDC90B-201ENST00000260054 ALMS1Q8TCU4 4167 aa10.73□□□□□ -0.69
CCDC90B-201ENST00000260054 IGLV4-60A0A075B6I1 120 aa10.73□□□□□ -0.69
CCDC90B-201ENST00000260054 HSBP1O75506 76 aa10.73□□□□□ -0.69
CCDC90B-201ENST00000260054 AMMECR1LQ6DCA0 310 aa10.72□□□□□ -0.69
CCDC90B-201ENST00000260054 FAM19A2Q8N3H0 131 aa10.72□□□□□ -0.69
CCDC90B-201ENST00000260054 TOMM6Q96B49 74 aa10.72□□□□□ -0.69
CCDC90B-201ENST00000260054 A0A1B0GUV1 79 aa10.71□□□□□ -0.69
CCDC90B-201ENST00000260054 HBDP02042 147 aa10.71□□□□□ -0.69
CCDC90B-201ENST00000260054 TRAV9-2A0A087WT02 112 aa10.7□□□□□ -0.7
CCDC90B-201ENST00000260054 STPG4Q8N801 248 aa10.7□□□□□ -0.7
CCDC90B-201ENST00000260054 FAM104AQ969W3 186 aa10.7□□□□□ -0.7
CCDC90B-201ENST00000260054 TIMM21Q9BVV7 248 aa10.7□□□□□ -0.7
CCDC90B-201ENST00000260054 OPRPNQ99935 248 aaPredicted RBP10.69□□□□□ -0.7
CCDC90B-201ENST00000260054 KRTAP1-5Q9BYS1 174 aa10.69□□□□□ -0.7
CCDC90B-201ENST00000260054 SPANXA1Q9NS26 97 aa10.69□□□□□ -0.7
CCDC90B-201ENST00000260054 CSDC2Q9Y534 153 aaKnown RBP10.69□□□□□ -0.7
CCDC90B-201ENST00000260054 IGIPA6NJ69 53 aa10.69□□□□□ -0.7
CCDC90B-201ENST00000260054 ANGP03950 147 aaKnown RBP10.69□□□□□ -0.7
CCDC90B-201ENST00000260054 OR5A1Q8NGJ0 315 aa10.69□□□□□ -0.7
CCDC90B-201ENST00000260054 KLK12Q9UKR0 248 aa10.69□□□□□ -0.7
CCDC90B-201ENST00000260054 PYGO1Q9Y3Y4 419 aa10.69□□□□□ -0.7
CCDC90B-201ENST00000260054 DGAT2L7PQ6IED9 249 aa10.68□□□□□ -0.7
CCDC90B-201ENST00000260054 Q6ZUT4 128 aa10.68□□□□□ -0.7
CCDC90B-201ENST00000260054 TMEM101Q96IK0 257 aa10.68□□□□□ -0.7
CCDC90B-201ENST00000260054 CDC42SE2Q9NRR3 84 aa10.68□□□□□ -0.7
CCDC90B-201ENST00000260054 KMT2AQ03164 3969 aa10.68□□□□□ -0.7
CCDC90B-201ENST00000260054 NBDYA0A0U1RRE5 68 aa10.67□□□□□ -0.7
CCDC90B-201ENST00000260054 LCE6AA0A183 80 aa10.67□□□□□ -0.7
CCDC90B-201ENST00000260054 SMAGPQ0VAQ4 97 aa10.67□□□□□ -0.7
CCDC90B-201ENST00000260054 SCGB3A1Q96QR1 104 aa10.67□□□□□ -0.7
CCDC90B-201ENST00000260054 IGLV4-3A0A075B6K6 122 aa10.66□□□□□ -0.7
CCDC90B-201ENST00000260054 LINC01549A6NIU2 74 aa10.66□□□□□ -0.7
CCDC90B-201ENST00000260054 RNASE13Q5GAN3 156 aaKnown RBP10.66□□□□□ -0.7
CCDC90B-201ENST00000260054 ERASQ7Z444 233 aa10.66□□□□□ -0.7
CCDC90B-201ENST00000260054 LINC00269Q8N2A0 174 aa10.66□□□□□ -0.7
CCDC90B-201ENST00000260054 TIMM17AQ99595 171 aa10.66□□□□□ -0.7
CCDC90B-201ENST00000260054 COX11Q9Y6N1 276 aa10.66□□□□□ -0.7
CCDC90B-201ENST00000260054 SACSQ9NZJ4 4579 aa10.66□□□□□ -0.7
CCDC90B-201ENST00000260054 HYDINQ4G0P3 5121 aa10.66□□□□□ -0.7
CCDC90B-201ENST00000260054 KMT2CQ8NEZ4 4911 aaKnown RBP10.66□□□□□ -0.7
CCDC90B-201ENST00000260054 MRPS36P82909 103 aaKnown RBP10.66□□□□□ -0.7
CCDC90B-201ENST00000260054 CLPSL2Q6UWE3 100 aa10.66□□□□□ -0.7
CCDC90B-201ENST00000260054 K7EP13 123 aa10.65□□□□□ -0.7
CCDC90B-201ENST00000260054 M0R2N4 97 aa10.65□□□□□ -0.7
CCDC90B-201ENST00000260054 UBE2V1Q13404 147 aa10.65□□□□□ -0.7
CCDC90B-201ENST00000260054 C10orf126Q8N4M7 172 aa10.65□□□□□ -0.7
CCDC90B-201ENST00000260054 PRR34Q9NV39 138 aa10.65□□□□□ -0.7
CCDC90B-201ENST00000260054 IBA57-AS1B1ANH7 110 aa10.64□□□□□ -0.71
CCDC90B-201ENST00000260054 PTTG1IPP53801 180 aa10.64□□□□□ -0.71
CCDC90B-201ENST00000260054 TTC32Q5I0X7 151 aa10.64□□□□□ -0.71
CCDC90B-201ENST00000260054 ENHOQ6UWT2 76 aa10.64□□□□□ -0.71
CCDC90B-201ENST00000260054 LINC00173Q6ZV60 143 aa10.64□□□□□ -0.71
CCDC90B-201ENST00000260054 TMEM141Q96I45 108 aa10.64□□□□□ -0.71
CCDC90B-201ENST00000260054 HINT1P49773 126 aaPredicted RBP10.63□□□□□ -0.71
CCDC90B-201ENST00000260054 REG3AQ06141 175 aa10.63□□□□□ -0.71
CCDC90B-201ENST00000260054 ZC2HC1BQ5TFG8 222 aa10.63□□□□□ -0.71
CCDC90B-201ENST00000260054 Q6ZR54 194 aa10.63□□□□□ -0.71
CCDC90B-201ENST00000260054 UBE2WQ96B02 151 aa10.63□□□□□ -0.71
CCDC90B-201ENST00000260054 IGKV3OR2-268A0A0C4DH90 116 aa10.63□□□□□ -0.71
CCDC90B-201ENST00000260054 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.63□□□□□ -0.71
CCDC90B-201ENST00000260054 LEPROTL1O95214 131 aa10.63□□□□□ -0.71
CCDC90B-201ENST00000260054 ATOH7Q8N100 152 aa10.63□□□□□ -0.71
CCDC90B-201ENST00000260054 CCL25O15444 150 aa10.62□□□□□ -0.71
CCDC90B-201ENST00000260054 ATP5LO75964 103 aa10.62□□□□□ -0.71
CCDC90B-201ENST00000260054 DNAH6Q9C0G6 4158 aa10.61□□□□□ -0.71
CCDC90B-201ENST00000260054 CRPP02741 224 aa10.61□□□□□ -0.71
CCDC90B-201ENST00000260054 MAJINQ3KP22 176 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms