RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 CHKB-CPT1BH3BT56 60 aa14.67□□□□□ -0.06
SOX4-201ENST00000244745 PRM2P04554 102 aa14.66□□□□□ -0.06
SOX4-201ENST00000244745 DSCAML1Q8TD84 2053 aa14.66□□□□□ -0.06
SOX4-201ENST00000244745 BPY2O14599 106 aa14.66□□□□□ -0.06
SOX4-201ENST00000244745 TIMM17BO60830 172 aa14.66□□□□□ -0.06
SOX4-201ENST00000244745 Q6Q795 121 aa14.66□□□□□ -0.06
SOX4-201ENST00000244745 KLLNB2CW77 178 aa14.65□□□□□ -0.06
SOX4-201ENST00000244745 USP17L23D6RBM5 183 aa14.65□□□□□ -0.06
SOX4-201ENST00000244745 FAM222AQ5U5X8 452 aa14.65□□□□□ -0.06
SOX4-201ENST00000244745 CNFNQ9BYD5 112 aa14.65□□□□□ -0.06
SOX4-201ENST00000244745 LRRC75A-AS1Q8N1F1 130 aa14.64□□□□□ -0.07
SOX4-201ENST00000244745 NOTCH3Q9UM47 2321 aa14.64□□□□□ -0.07
SOX4-201ENST00000244745 POLR2KP53803 58 aaKnown RBP14.64□□□□□ -0.07
SOX4-201ENST00000244745 UBE2D4Q9Y2X8 147 aa14.64□□□□□ -0.07
SOX4-201ENST00000244745 TNCP24821 2201 aa14.64□□□□□ -0.07
SOX4-201ENST00000244745 C9orf85Q96MD7 179 aa14.64□□□□□ -0.07
SOX4-201ENST00000244745 IBA57-AS1B1ANH7 110 aa14.63□□□□□ -0.07
SOX4-201ENST00000244745 C18orf65Q6ZTR6 163 aa14.63□□□□□ -0.07
SOX4-201ENST00000244745 NDUFB1O75438 58 aa14.63□□□□□ -0.07
SOX4-201ENST00000244745 TRBV6-8A0A0A6YYG3 113 aa14.63□□□□□ -0.07
SOX4-201ENST00000244745 M0QXV9 152 aa14.62□□□□□ -0.07
SOX4-201ENST00000244745 CRYGDP07320 174 aa14.62□□□□□ -0.07
SOX4-201ENST00000244745 SNURFQ9Y675 71 aa14.62□□□□□ -0.07
SOX4-201ENST00000244745 PRR14LQ5THK1 2151 aa14.62□□□□□ -0.07
SOX4-201ENST00000244745 ZFHX2Q9C0A1 2572 aaPredicted RBP14.61□□□□□ -0.07
SOX4-201ENST00000244745 ZNF702PQ9H963 129 aa14.61□□□□□ -0.07
SOX4-201ENST00000244745 CRIP2P52943 208 aaPredicted RBP14.61□□□□□ -0.07
SOX4-201ENST00000244745 SVIPQ8NHG7 77 aa14.61□□□□□ -0.07
SOX4-201ENST00000244745 EDN2P20800 178 aa14.61□□□□□ -0.07
SOX4-201ENST00000244745 PLCE1Q9P212 2302 aa14.61□□□□□ -0.07
SOX4-201ENST00000244745 UBE2AP49459 152 aa14.6□□□□□ -0.07
SOX4-201ENST00000244745 SPTSSBQ8NFR3 76 aa14.6□□□□□ -0.07
SOX4-201ENST00000244745 DCANP1Q8TF63 244 aa14.6□□□□□ -0.07
SOX4-201ENST00000244745 FAM240AA0A1B0GVK7 77 aa14.6□□□□□ -0.07
SOX4-201ENST00000244745 EML5Q05BV3 1969 aa14.58□□□□□ -0.07
SOX4-201ENST00000244745 LOC100131303A0A0U1RQF7 123 aa14.58□□□□□ -0.08
SOX4-201ENST00000244745 IGLV1-40P01703 118 aa14.58□□□□□ -0.08
SOX4-201ENST00000244745 CDSNQ15517 529 aa14.58□□□□□ -0.08
SOX4-201ENST00000244745 Q6ZSV7 163 aa14.58□□□□□ -0.08
SOX4-201ENST00000244745 UBE2D1P51668 147 aa14.58□□□□□ -0.08
SOX4-201ENST00000244745 TRBV6-4A0A1B0GX49 114 aa14.57□□□□□ -0.08
SOX4-201ENST00000244745 IGIPA6NJ69 53 aa14.57□□□□□ -0.08
SOX4-201ENST00000244745 LYRM9A8MSI8 78 aa14.56□□□□□ -0.08
SOX4-201ENST00000244745 SMIM11BQ8TCY0 68 aa14.56□□□□□ -0.08
SOX4-201ENST00000244745 A0A096LNJ9 63 aa14.56□□□□□ -0.08
SOX4-201ENST00000244745 V9GYY9 64 aa14.56□□□□□ -0.08
SOX4-201ENST00000244745 PLXNB1O43157 2135 aa14.55□□□□□ -0.08
SOX4-201ENST00000244745 IGLV4-69A0A075B6H9 119 aa14.55□□□□□ -0.08
SOX4-201ENST00000244745 UBE2D3P61077 147 aa14.55□□□□□ -0.08
SOX4-201ENST00000244745 UBE2D2P62837 147 aa14.55□□□□□ -0.08
SOX4-201ENST00000244745 PSMG3-AS1Q96PY0 264 aa14.55□□□□□ -0.08
SOX4-201ENST00000244745 LINC00482Q8N8I6 264 aa14.54□□□□□ -0.08
SOX4-201ENST00000244745 Q6JHZ5 121 aa14.54□□□□□ -0.08
SOX4-201ENST00000244745 SMIM9A6NGZ8 99 aa14.53□□□□□ -0.08
SOX4-201ENST00000244745 ATP5EP56381 51 aaPredicted RBP14.53□□□□□ -0.08
SOX4-201ENST00000244745 C6orf99Q4VX62 202 aa14.53□□□□□ -0.08
SOX4-201ENST00000244745 POM121L12Q8N7R1 296 aa14.53□□□□□ -0.08
SOX4-201ENST00000244745 TSPEAR-AS2P59090 65 aa14.53□□□□□ -0.08
SOX4-201ENST00000244745 WFDC10AQ9H1F0 79 aa14.53□□□□□ -0.08
SOX4-201ENST00000244745 MRPS36P82909 103 aaKnown RBP14.52□□□□□ -0.08
SOX4-201ENST00000244745 H0Y9J4 135 aa14.52□□□□□ -0.08
SOX4-201ENST00000244745 BBC3Q96PG8 261 aaPredicted RBP14.52□□□□□ -0.09
SOX4-201ENST00000244745 XAGE1AQ9HD64 81 aa14.52□□□□□ -0.09
SOX4-201ENST00000244745 RAI1Q7Z5J4 1906 aaPredicted RBP14.51□□□□□ -0.09
SOX4-201ENST00000244745 CREBBPQ92793 2442 aa14.51□□□□□ -0.09
SOX4-201ENST00000244745 C4orf48Q5BLP8 95 aa14.51□□□□□ -0.09
SOX4-201ENST00000244745 NDUFC1O43677 76 aa14.5□□□□□ -0.09
SOX4-201ENST00000244745 HRCT1Q6UXD1 115 aa14.5□□□□□ -0.09
SOX4-201ENST00000244745 EXPH5Q8NEV8 1989 aa14.49□□□□□ -0.09
SOX4-201ENST00000244745 MRPL55Q7Z7F7 128 aaKnown RBP14.49□□□□□ -0.09
SOX4-201ENST00000244745 C11orf45Q8TAV5 145 aa14.49□□□□□ -0.09
SOX4-201ENST00000244745 IGKV2-24A0A0C4DH68 120 aa14.48□□□□□ -0.09
SOX4-201ENST00000244745 DSCAMO60469 2012 aa14.47□□□□□ -0.09
SOX4-201ENST00000244745 LINC00959A0A1B0GUT2 108 aa14.47□□□□□ -0.09
SOX4-201ENST00000244745 LINC00526Q96FQ7 95 aa14.47□□□□□ -0.09
SOX4-201ENST00000244745 C3orf84H3BNL1 204 aa14.44□□□□□ -0.1
SOX4-201ENST00000244745 CCKP06307 115 aa14.44□□□□□ -0.1
SOX4-201ENST00000244745 CDIP1Q9H305 208 aa14.43□□□□□ -0.1
SOX4-201ENST00000244745 IGLV2-18A0A075B6J9 118 aa14.43□□□□□ -0.1
SOX4-201ENST00000244745 COX8CQ7Z4L0 72 aa14.43□□□□□ -0.1
SOX4-201ENST00000244745 CDC42SE2Q9NRR3 84 aa14.43□□□□□ -0.1
SOX4-201ENST00000244745 AVPP01185 164 aa14.43□□□□□ -0.1
SOX4-201ENST00000244745 HIGD2AQ9BW72 106 aa14.43□□□□□ -0.1
SOX4-201ENST00000244745 A0A087WVE0 104 aa14.42□□□□□ -0.1
SOX4-201ENST00000244745 COX6A2Q02221 97 aa14.42□□□□□ -0.1
SOX4-201ENST00000244745 MRGPRG-AS1Q2M3A8 158 aa14.42□□□□□ -0.1
SOX4-201ENST00000244745 CD164L2Q6UWJ8 174 aa14.42□□□□□ -0.1
SOX4-201ENST00000244745 Q6ZQY7 126 aa14.41□□□□□ -0.1
SOX4-201ENST00000244745 C1orf195Q5TG92 126 aa14.41□□□□□ -0.1
SOX4-201ENST00000244745 B9D2Q9BPU9 175 aa14.41□□□□□ -0.1
SOX4-201ENST00000244745 CHCHD7Q9BUK0 85 aa14.41□□□□□ -0.1
SOX4-201ENST00000244745 ZNF580Q9UK33 172 aa14.41□□□□□ -0.1
SOX4-201ENST00000244745 WFDC10BQ8IUB3 73 aa14.4□□□□□ -0.1
SOX4-201ENST00000244745 IGKV4-1P06312 121 aa14.4□□□□□ -0.1
SOX4-201ENST00000244745 LINC00242Q5T6M2 205 aa14.4□□□□□ -0.1
SOX4-201ENST00000244745 ADAMTSL4-AS1Q5T5F5 129 aa14.4□□□□□ -0.11
SOX4-201ENST00000244745 FAM19A3Q7Z5A8 133 aa14.4□□□□□ -0.11
SOX4-201ENST00000244745 DEFB131BA0A096LNP1 70 aa14.39□□□□□ -0.11
SOX4-201ENST00000244745 FAM19A5Q7Z5A7 132 aaPredicted RBP14.39□□□□□ -0.11
SOX4-201ENST00000244745 MIFP14174 115 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms