RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 ADAMTSL4-AS1Q5T5F5 129 aa14.65□□□□□ -0.06
HOXC13-201ENST00000243056 IGHV3-35A0A0C4DH35 117 aa14.64□□□□□ -0.07
HOXC13-201ENST00000243056 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.64□□□□□ -0.07
HOXC13-201ENST00000243056 FN1P02751 2386 aaKnown RBP14.64□□□□□ -0.07
HOXC13-201ENST00000243056 PEMTQ9UBM1 199 aa14.64□□□□□ -0.07
HOXC13-201ENST00000243056 NSD1Q96L73 2696 aaPredicted RBP14.64□□□□□ -0.07
HOXC13-201ENST00000243056 CYSRT1A8MQ03 144 aa14.63□□□□□ -0.07
HOXC13-201ENST00000243056 C10orf99Q6UWK7 81 aa14.63□□□□□ -0.07
HOXC13-201ENST00000243056 HIST2H2BDQ6DRA6 164 aa14.63□□□□□ -0.07
HOXC13-201ENST00000243056 Q6YL49 198 aa14.63□□□□□ -0.07
HOXC13-201ENST00000243056 F8P00451 2351 aa14.62□□□□□ -0.07
HOXC13-201ENST00000243056 TRAV13-1A0A0B4J241 112 aa14.62□□□□□ -0.07
HOXC13-201ENST00000243056 RPL18AQ02543 176 aaKnown RBP14.62□□□□□ -0.07
HOXC13-201ENST00000243056 F8WDY8 70 aa14.62□□□□□ -0.07
HOXC13-201ENST00000243056 IGLV11-55A0A075B6I3 123 aa14.61□□□□□ -0.07
HOXC13-201ENST00000243056 IGF1P05019 195 aa14.61□□□□□ -0.07
HOXC13-201ENST00000243056 IGHV3-66A0A0C4DH42 116 aa14.61□□□□□ -0.07
HOXC13-201ENST00000243056 LY6G6DO95868 133 aa14.61□□□□□ -0.07
HOXC13-201ENST00000243056 ZFAND3Q9H8U3 227 aa14.61□□□□□ -0.07
HOXC13-201ENST00000243056 JMJD1CQ15652 2540 aa14.6□□□□□ -0.07
HOXC13-201ENST00000243056 RS1O15537 224 aa14.6□□□□□ -0.07
HOXC13-201ENST00000243056 TMEM61Q8N0U2 210 aa14.6□□□□□ -0.07
HOXC13-201ENST00000243056 TRAV12-3A0A0B4J271 114 aa14.6□□□□□ -0.07
HOXC13-201ENST00000243056 POLR2KP53803 58 aaKnown RBP14.6□□□□□ -0.07
HOXC13-201ENST00000243056 DAZ2Q13117 558 aaKnown RBP14.6□□□□□ -0.07
HOXC13-201ENST00000243056 DAZ4Q86SG3 579 aaKnown RBP14.6□□□□□ -0.07
HOXC13-201ENST00000243056 DAZ1Q9NQZ3 744 aaKnown RBP14.6□□□□□ -0.07
HOXC13-201ENST00000243056 DAZ3Q9NR90 486 aaKnown RBP14.6□□□□□ -0.07
HOXC13-201ENST00000243056 MALP21145 153 aa14.59□□□□□ -0.07
HOXC13-201ENST00000243056 CTSGP08311 255 aa14.58□□□□□ -0.07
HOXC13-201ENST00000243056 C9orf139Q6ZV77 190 aa14.58□□□□□ -0.07
HOXC13-201ENST00000243056 SERP2Q8N6R1 65 aa14.58□□□□□ -0.07
HOXC13-201ENST00000243056 PHLDA3Q9Y5J5 127 aa14.58□□□□□ -0.07
HOXC13-201ENST00000243056 A0A0J9YXV3 536 aa14.57□□□□□ -0.08
HOXC13-201ENST00000243056 ESM1Q9NQ30 184 aa14.57□□□□□ -0.08
HOXC13-201ENST00000243056 PPP1R17O96001 155 aa14.57□□□□□ -0.08
HOXC13-201ENST00000243056 IGHG2P01859 326 aa14.57□□□□□ -0.08
HOXC13-201ENST00000243056 IGHV3-30-3P0DP02 117 aa14.57□□□□□ -0.08
HOXC13-201ENST00000243056 S100A4P26447 101 aaKnown RBP14.57□□□□□ -0.08
HOXC13-201ENST00000243056 TIRAPP58753 221 aa14.57□□□□□ -0.08
HOXC13-201ENST00000243056 C15orf32Q32M92 178 aa14.57□□□□□ -0.08
HOXC13-201ENST00000243056 PRO0628Q9UI54 55 aa14.57□□□□□ -0.08
HOXC13-201ENST00000243056 C22orf24Q9Y442 160 aa14.57□□□□□ -0.08
HOXC13-201ENST00000243056 MIAQ16674 131 aa14.56□□□□□ -0.08
HOXC13-201ENST00000243056 IGHV3OR16-13A0A075B7E8 117 aa14.56□□□□□ -0.08
HOXC13-201ENST00000243056 IGHV3-74A0A0B4J1X5 117 aa14.56□□□□□ -0.08
HOXC13-201ENST00000243056 LINC00315P59091 139 aa14.56□□□□□ -0.08
HOXC13-201ENST00000243056 LINC00336Q6ZUF6 198 aa14.56□□□□□ -0.08
HOXC13-201ENST00000243056 C9orf47Q6ZRZ4 202 aa14.55□□□□□ -0.08
HOXC13-201ENST00000243056 FAM110DQ8TAY7 271 aaPredicted RBP14.55□□□□□ -0.08
HOXC13-201ENST00000243056 IGHV3-11P01762 117 aa14.54□□□□□ -0.08
HOXC13-201ENST00000243056 BUB3O43684 328 aa14.54□□□□□ -0.08
HOXC13-201ENST00000243056 VCYO14598 125 aa14.53□□□□□ -0.08
HOXC13-201ENST00000243056 PFN2P35080 140 aa14.53□□□□□ -0.08
HOXC13-201ENST00000243056 C19orf54Q5BKX5 351 aa14.53□□□□□ -0.08
HOXC13-201ENST00000243056 KIF25-AS1Q9Y6Z4 181 aa14.53□□□□□ -0.08
HOXC13-201ENST00000243056 IGHV4OR15-8A0A075B7B6 117 aa14.53□□□□□ -0.08
HOXC13-201ENST00000243056 A0A087WVE0 104 aa14.53□□□□□ -0.08
HOXC13-201ENST00000243056 A0A087WW49 117 aa14.53□□□□□ -0.08
HOXC13-201ENST00000243056 SUMO4Q6EEV6 95 aa14.53□□□□□ -0.08
HOXC13-201ENST00000243056 DAND5Q8N907 189 aa14.53□□□□□ -0.08
HOXC13-201ENST00000243056 C1orf43Q9BWL3 253 aa14.53□□□□□ -0.08
HOXC13-201ENST00000243056 TINCRA0A1B0GVN0 87 aa14.52□□□□□ -0.08
HOXC13-201ENST00000243056 DNAJC9-AS1A6NH13 148 aa14.52□□□□□ -0.08
HOXC13-201ENST00000243056 INAFM1C9JVW0 142 aa14.52□□□□□ -0.08
HOXC13-201ENST00000243056 TRBV12-3P01733 135 aa14.52□□□□□ -0.09
HOXC13-201ENST00000243056 CLEC19AQ6UXS0 136 aa14.52□□□□□ -0.09
HOXC13-201ENST00000243056 CLPSL1A2RUU4 121 aa14.51□□□□□ -0.09
HOXC13-201ENST00000243056 FHL2Q14192 279 aa14.51□□□□□ -0.09
HOXC13-201ENST00000243056 ZNF702PQ9H963 129 aa14.51□□□□□ -0.09
HOXC13-201ENST00000243056 IGKV3D-7A0A0C4DH55 119 aa14.51□□□□□ -0.09
HOXC13-201ENST00000243056 RPL35AP18077 110 aaKnown RBP14.51□□□□□ -0.09
HOXC13-201ENST00000243056 BEAN1Q3B7T3 259 aa14.51□□□□□ -0.09
HOXC13-201ENST00000243056 CCDC140Q96MF4 163 aa14.51□□□□□ -0.09
HOXC13-201ENST00000243056 GNRH2O43555 120 aa14.5□□□□□ -0.09
HOXC13-201ENST00000243056 IGHV3-49A0A0A0MS15 119 aa14.5□□□□□ -0.09
HOXC13-201ENST00000243056 RNASE3P12724 160 aaKnown RBP14.5□□□□□ -0.09
HOXC13-201ENST00000243056 MAST4O15021 2626 aa14.49□□□□□ -0.09
HOXC13-201ENST00000243056 A8MZ25 164 aa14.49□□□□□ -0.09
HOXC13-201ENST00000243056 SYNJ2BPP57105 145 aa14.49□□□□□ -0.09
HOXC13-201ENST00000243056 NDUFA12Q9UI09 145 aa14.49□□□□□ -0.09
HOXC13-201ENST00000243056 COX7A2LO14548 114 aa14.49□□□□□ -0.09
HOXC13-201ENST00000243056 ZFAND2AQ8N6M9 145 aa14.49□□□□□ -0.09
HOXC13-201ENST00000243056 PKIGQ9Y2B9 76 aa14.49□□□□□ -0.09
HOXC13-201ENST00000243056 BAALC-AS2P0C853 105 aa14.48□□□□□ -0.09
HOXC13-201ENST00000243056 TRBV27A0A0K0K1C4 114 aa14.47□□□□□ -0.09
HOXC13-201ENST00000243056 LINC01561Q8N1V8 128 aa14.47□□□□□ -0.09
HOXC13-201ENST00000243056 MUC4Q99102 2169 aa14.47□□□□□ -0.09
HOXC13-201ENST00000243056 NXPH4O95158 308 aa14.47□□□□□ -0.09
HOXC13-201ENST00000243056 C2CD3Q4AC94 2353 aa14.47□□□□□ -0.09
HOXC13-201ENST00000243056 A0A087WWL8 130 aa14.46□□□□□ -0.09
HOXC13-201ENST00000243056 USP17L23D6RBM5 183 aa14.46□□□□□ -0.09
HOXC13-201ENST00000243056 MRPL53Q96EL3 112 aaKnown RBP14.46□□□□□ -0.09
HOXC13-201ENST00000243056 C11orf44Q8N8P7 122 aa14.46□□□□□ -0.09
HOXC13-201ENST00000243056 IGLV4-3A0A075B6K6 122 aa14.45□□□□□ -0.1
HOXC13-201ENST00000243056 TRAV21A0A0B4J279 112 aa14.45□□□□□ -0.1
HOXC13-201ENST00000243056 WNK1Q9H4A3 2382 aa14.45□□□□□ -0.1
HOXC13-201ENST00000243056 CFHR3Q02985 330 aa14.45□□□□□ -0.1
HOXC13-201ENST00000243056 C20orf173Q96LM9 149 aa14.45□□□□□ -0.1
HOXC13-201ENST00000243056 NACAE9PAV3 2078 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms