RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 ZNF25P17030 456 aaPredicted RBP5.05□□□□□ -1.6
IFT43-201ENST00000238628 CAMPP49913 170 aa5.05□□□□□ -1.6
IFT43-201ENST00000238628 LINC01547P58512 204 aaPredicted RBP5.05□□□□□ -1.6
IFT43-201ENST00000238628 C9orf116Q5BN46 136 aaPredicted RBP5.05□□□□□ -1.6
IFT43-201ENST00000238628 CENPWQ5EE01 88 aa5.05□□□□□ -1.6
IFT43-201ENST00000238628 C9orf62Q8N4C0 152 aa5.05□□□□□ -1.6
IFT43-201ENST00000238628 RPL39LQ96EH5 51 aaKnown RBP5.05□□□□□ -1.6
IFT43-201ENST00000238628 IGLV4-69A0A075B6H9 119 aa5.04□□□□□ -1.6
IFT43-201ENST00000238628 RAB19A4D1S5 217 aa5.04□□□□□ -1.6
IFT43-201ENST00000238628 UMAD1C9J7I0 102 aa5.04□□□□□ -1.6
IFT43-201ENST00000238628 I3L3M4 83 aa5.04□□□□□ -1.6
IFT43-201ENST00000238628 BCL2P10415 239 aa5.04□□□□□ -1.6
IFT43-201ENST00000238628 PMCHP20382 165 aa5.04□□□□□ -1.6
IFT43-201ENST00000238628 GNG4P50150 75 aa5.04□□□□□ -1.6
IFT43-201ENST00000238628 EIF5AP63241 154 aaKnown RBP5.04□□□□□ -1.6
IFT43-201ENST00000238628 EIF5AL1Q6IS14 154 aaKnown RBP5.04□□□□□ -1.6
IFT43-201ENST00000238628 CD164L2Q6UWJ8 174 aa5.04□□□□□ -1.6
IFT43-201ENST00000238628 PHF5AQ7RTV0 110 aaKnown RBP5.04□□□□□ -1.6
IFT43-201ENST00000238628 DIRC1Q969H9 104 aa5.04□□□□□ -1.6
IFT43-201ENST00000238628 SDHAF1A6NFY7 115 aa5.03□□□□□ -1.6
IFT43-201ENST00000238628 IGLV7-43P04211 117 aa5.03□□□□□ -1.6
IFT43-201ENST00000238628 MALP21145 153 aa5.03□□□□□ -1.6
IFT43-201ENST00000238628 CCL20P78556 96 aa5.03□□□□□ -1.6
IFT43-201ENST00000238628 NUP35Q8NFH5 326 aa5.03□□□□□ -1.6
IFT43-201ENST00000238628 CAMK2N2Q96S95 79 aa5.03□□□□□ -1.6
IFT43-201ENST00000238628 IGLV1-50A0A075B6I6 118 aa5.02□□□□□ -1.61
IFT43-201ENST00000238628 G3V3Q6 166 aa5.02□□□□□ -1.61
IFT43-201ENST00000238628 APOMO95445 188 aa5.02□□□□□ -1.61
IFT43-201ENST00000238628 RPL18AQ02543 176 aaKnown RBP5.02□□□□□ -1.61
IFT43-201ENST00000238628 TEX261Q6UWH6 196 aa5.02□□□□□ -1.61
IFT43-201ENST00000238628 SMIM15Q7Z3B0 74 aa5.02□□□□□ -1.61
IFT43-201ENST00000238628 NUDT10Q8NFP7 164 aa5.02□□□□□ -1.61
IFT43-201ENST00000238628 C11orf52Q96A22 123 aa5.02□□□□□ -1.61
IFT43-201ENST00000238628 SMIM12Q96EX1 92 aa5.02□□□□□ -1.61
IFT43-201ENST00000238628 NUDT11Q96G61 164 aa5.02□□□□□ -1.61
IFT43-201ENST00000238628 MANBALQ9NQG1 85 aa5.02□□□□□ -1.61
IFT43-201ENST00000238628 BIN3Q9NQY0 253 aa5.02□□□□□ -1.61
IFT43-201ENST00000238628 CDC42SE2Q9NRR3 84 aa5.02□□□□□ -1.61
IFT43-201ENST00000238628 GNG13Q9P2W3 67 aa5.02□□□□□ -1.61
IFT43-201ENST00000238628 A0A087WZ39 114 aa5.01□□□□□ -1.61
IFT43-201ENST00000238628 H0Y9J4 135 aa5.01□□□□□ -1.61
IFT43-201ENST00000238628 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.01□□□□□ -1.61
IFT43-201ENST00000238628 ESDP10768 282 aa5.01□□□□□ -1.61
IFT43-201ENST00000238628 CTRLP40313 264 aa5.01□□□□□ -1.61
IFT43-201ENST00000238628 FOXA3P55318 350 aaPredicted RBP5.01□□□□□ -1.61
IFT43-201ENST00000238628 MEF2BQ02080 365 aaPredicted RBP5.01□□□□□ -1.61
IFT43-201ENST00000238628 MRAP2Q96G30 205 aa5.01□□□□□ -1.61
IFT43-201ENST00000238628 OPRPNQ99935 248 aaPredicted RBP5.01□□□□□ -1.61
IFT43-201ENST00000238628 CNFNQ9BYD5 112 aa5.01□□□□□ -1.61
IFT43-201ENST00000238628 MED9Q9NWA0 146 aa5.01□□□□□ -1.61
IFT43-201ENST00000238628 TRAV1-1A0A0B4J248 108 aa5□□□□□ -1.61
IFT43-201ENST00000238628 C1orf196B1AJZ1 125 aa5□□□□□ -1.61
IFT43-201ENST00000238628 COX7A2LO14548 114 aa5□□□□□ -1.61
IFT43-201ENST00000238628 BCL2L11O43521 198 aa5□□□□□ -1.61
IFT43-201ENST00000238628 UBE2D1P51668 147 aa5□□□□□ -1.61
IFT43-201ENST00000238628 TSKUQ8WUA8 353 aa5□□□□□ -1.61
IFT43-201ENST00000238628 C2orf48Q96LS8 159 aa5□□□□□ -1.61
IFT43-201ENST00000238628 TRBV6-5A0A0K0K1A5 114 aa4.99□□□□□ -1.61
IFT43-201ENST00000238628 SMLR1H3BR10 107 aa4.99□□□□□ -1.61
IFT43-201ENST00000238628 TSHBP01222 138 aa4.99□□□□□ -1.61
IFT43-201ENST00000238628 RNF151Q2KHN1 245 aa4.99□□□□□ -1.61
IFT43-201ENST00000238628 MRPL52Q86TS9 123 aaKnown RBP4.99□□□□□ -1.61
IFT43-201ENST00000238628 FAM210AQ96ND0 272 aa4.99□□□□□ -1.61
IFT43-201ENST00000238628 RPP21Q9H633 154 aaKnown RBP4.99□□□□□ -1.61
IFT43-201ENST00000238628 ST20Q9HBF5 79 aa4.99□□□□□ -1.61
IFT43-201ENST00000238628 TMEM242Q9NWH2 141 aa4.99□□□□□ -1.61
IFT43-201ENST00000238628 TRBV20OR9-2A0A075B6H5 130 aa4.98□□□□□ -1.61
IFT43-201ENST00000238628 KANTRA0A1W2PQU2 76 aa4.98□□□□□ -1.61
IFT43-201ENST00000238628 TEX46H3BTG2 121 aa4.98□□□□□ -1.61
IFT43-201ENST00000238628 PDE6DO43924 150 aa4.98□□□□□ -1.61
IFT43-201ENST00000238628 KRTAP1-4P0C5Y4 121 aa4.98□□□□□ -1.61
IFT43-201ENST00000238628 ZNF345Q14585 488 aa4.98□□□□□ -1.61
IFT43-201ENST00000238628 C5orf38Q86SI9 138 aa4.98□□□□□ -1.61
IFT43-201ENST00000238628 KRTAP11-1Q8IUC1 163 aa4.98□□□□□ -1.61
IFT43-201ENST00000238628 KRTAP4-11Q9BYQ6 195 aa4.98□□□□□ -1.61
IFT43-201ENST00000238628 RNASE7Q9H1E1 156 aaKnown RBP4.98□□□□□ -1.61
IFT43-201ENST00000238628 TRAV13-1A0A0B4J241 112 aa4.97□□□□□ -1.61
IFT43-201ENST00000238628 FAM168BA1KXE4 195 aa4.97□□□□□ -1.61
IFT43-201ENST00000238628 C7orf77A4D0Y5 90 aa4.97□□□□□ -1.61
IFT43-201ENST00000238628 RPL13AP40429 203 aaKnown RBP4.97□□□□□ -1.61
IFT43-201ENST00000238628 POLR2KP53803 58 aaKnown RBP4.97□□□□□ -1.61
IFT43-201ENST00000238628 SPAG11BQ08648 103 aa4.97□□□□□ -1.61
IFT43-201ENST00000238628 OCC1Q8TAD7 63 aa4.97□□□□□ -1.61
IFT43-201ENST00000238628 IMMP2LQ96T52 175 aa4.97□□□□□ -1.61
IFT43-201ENST00000238628 TSPAN13O95857 204 aa4.96□□□□□ -1.62
IFT43-201ENST00000238628 SMAGPQ0VAQ4 97 aa4.96□□□□□ -1.62
IFT43-201ENST00000238628 RNASE13Q5GAN3 156 aaKnown RBP4.96□□□□□ -1.62
IFT43-201ENST00000238628 FAM19A5Q7Z5A7 132 aaPredicted RBP4.96□□□□□ -1.62
IFT43-201ENST00000238628 MRPL35Q9NZE8 188 aaKnown RBP4.96□□□□□ -1.62
IFT43-201ENST00000238628 TRBV27A0A0K0K1C4 114 aa4.95□□□□□ -1.62
IFT43-201ENST00000238628 HMSDA8MTL9 139 aa4.95□□□□□ -1.62
IFT43-201ENST00000238628 F8WDY8 70 aa4.95□□□□□ -1.62
IFT43-201ENST00000238628 K7EN84 100 aa4.95□□□□□ -1.62
IFT43-201ENST00000238628 VCYO14598 125 aa4.95□□□□□ -1.62
IFT43-201ENST00000238628 GATCO43716 136 aaKnown RBP4.95□□□□□ -1.62
IFT43-201ENST00000238628 FCER1GP30273 86 aa4.95□□□□□ -1.62
IFT43-201ENST00000238628 UBE2BP63146 152 aa4.95□□□□□ -1.62
IFT43-201ENST00000238628 TMEM241Q24JQ0 296 aa4.95□□□□□ -1.62
IFT43-201ENST00000238628 GAGE2EQ4V326 116 aa4.95□□□□□ -1.62
IFT43-201ENST00000238628 KRTAP5-3Q6L8H2 238 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms