RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 MRAPQ8TCY5 172 aa10.61□□□□□ -0.71
HDHD3-201ENST00000238379 CSDC2Q9Y534 153 aaKnown RBP10.61□□□□□ -0.71
HDHD3-201ENST00000238379 C11orf86A6NJI1 115 aa10.6□□□□□ -0.71
HDHD3-201ENST00000238379 TCTAP57738 103 aa10.6□□□□□ -0.71
HDHD3-201ENST00000238379 RNASE13Q5GAN3 156 aaKnown RBP10.6□□□□□ -0.71
HDHD3-201ENST00000238379 H7C423 109 aa10.58□□□□□ -0.72
HDHD3-201ENST00000238379 COX8AP10176 69 aa10.58□□□□□ -0.72
HDHD3-201ENST00000238379 DGAT2L7PQ6IED9 249 aa10.58□□□□□ -0.72
HDHD3-201ENST00000238379 NFE4Q86UQ8 179 aa10.58□□□□□ -0.72
HDHD3-201ENST00000238379 TP73-AS1Q9UF72 201 aa10.58□□□□□ -0.72
HDHD3-201ENST00000238379 IGKV2D-26A0A0A0MRZ7 120 aa10.58□□□□□ -0.72
HDHD3-201ENST00000238379 Q6ZTC4 211 aa10.58□□□□□ -0.72
HDHD3-201ENST00000238379 A0A096LPF7 62 aa10.57□□□□□ -0.72
HDHD3-201ENST00000238379 UBE2L6O14933 153 aa10.57□□□□□ -0.72
HDHD3-201ENST00000238379 SLC25A34Q6PIV7 304 aa10.57□□□□□ -0.72
HDHD3-201ENST00000238379 A0A0J9YXV3 536 aa10.56□□□□□ -0.72
HDHD3-201ENST00000238379 SMAGPQ0VAQ4 97 aa10.56□□□□□ -0.72
HDHD3-201ENST00000238379 MRPL23Q16540 153 aaKnown RBP10.56□□□□□ -0.72
HDHD3-201ENST00000238379 NMUP48645 174 aa10.56□□□□□ -0.72
HDHD3-201ENST00000238379 DEFA6Q01524 100 aa10.56□□□□□ -0.72
HDHD3-201ENST00000238379 AMMECR1LQ6DCA0 310 aa10.56□□□□□ -0.72
HDHD3-201ENST00000238379 OR5A1Q8NGJ0 315 aa10.56□□□□□ -0.72
HDHD3-201ENST00000238379 C11orf45Q8TAV5 145 aa10.56□□□□□ -0.72
HDHD3-201ENST00000238379 CHAC1Q9BUX1 264 aa10.56□□□□□ -0.72
HDHD3-201ENST00000238379 CDC42SE2Q9NRR3 84 aa10.56□□□□□ -0.72
HDHD3-201ENST00000238379 GAGE6Q13070 117 aa10.55□□□□□ -0.72
HDHD3-201ENST00000238379 PCP2Q8IVA1 136 aa10.55□□□□□ -0.72
HDHD3-201ENST00000238379 CHCHD5Q9BSY4 110 aa10.55□□□□□ -0.72
HDHD3-201ENST00000238379 ICOSQ9Y6W8 199 aa10.55□□□□□ -0.72
HDHD3-201ENST00000238379 ZNF25P17030 456 aaPredicted RBP10.54□□□□□ -0.72
HDHD3-201ENST00000238379 HNRNPA3P51991 378 aaKnown RBP10.54□□□□□ -0.72
HDHD3-201ENST00000238379 NANOS2P60321 138 aaKnown RBP10.54□□□□□ -0.72
HDHD3-201ENST00000238379 BOD1L2Q8IYS8 172 aa10.54□□□□□ -0.72
HDHD3-201ENST00000238379 C2orf88Q9BSF0 95 aa10.54□□□□□ -0.72
HDHD3-201ENST00000238379 H3BNG1 76 aa10.54□□□□□ -0.72
HDHD3-201ENST00000238379 UBE2D1P51668 147 aa10.54□□□□□ -0.72
HDHD3-201ENST00000238379 TMEM101Q96IK0 257 aa10.54□□□□□ -0.72
HDHD3-201ENST00000238379 E9PLD3 99 aa10.53□□□□□ -0.72
HDHD3-201ENST00000238379 DLEU1O43261 78 aa10.53□□□□□ -0.72
HDHD3-201ENST00000238379 ZNF22P17026 224 aaPredicted RBP10.53□□□□□ -0.72
HDHD3-201ENST00000238379 TMEM170BQ5T4T1 132 aa10.53□□□□□ -0.72
HDHD3-201ENST00000238379 SH2D6Q7Z4S9 175 aa10.53□□□□□ -0.72
HDHD3-201ENST00000238379 MRPS16Q9Y3D3 137 aaKnown RBP10.53□□□□□ -0.72
HDHD3-201ENST00000238379 CTAG1AP78358 180 aa10.52□□□□□ -0.73
HDHD3-201ENST00000238379 TTTY13Q9BZ97 58 aa10.52□□□□□ -0.73
HDHD3-201ENST00000238379 IGLV4-60A0A075B6I1 120 aa10.51□□□□□ -0.73
HDHD3-201ENST00000238379 TINCRA0A1B0GVN0 87 aa10.51□□□□□ -0.73
HDHD3-201ENST00000238379 C2orf91Q6ZV80 131 aa10.51□□□□□ -0.73
HDHD3-201ENST00000238379 TMEM223A0PJW6 202 aa10.5□□□□□ -0.73
HDHD3-201ENST00000238379 KRTAP21-3Q3LHN1 58 aa10.5□□□□□ -0.73
HDHD3-201ENST00000238379 FAM19A3Q7Z5A8 133 aa10.5□□□□□ -0.73
HDHD3-201ENST00000238379 DEFB131BA0A096LNP1 70 aa10.49□□□□□ -0.73
HDHD3-201ENST00000238379 TRAV8-6A0A0B4J262 113 aa10.49□□□□□ -0.73
HDHD3-201ENST00000238379 A0A1B0GUV1 79 aa10.49□□□□□ -0.73
HDHD3-201ENST00000238379 HERVK_113P61574 105 aa10.49□□□□□ -0.73
HDHD3-201ENST00000238379 MAPKAPK5-AS1Q8N8E1 139 aa10.49□□□□□ -0.73
HDHD3-201ENST00000238379 TIRAPP58753 221 aa10.49□□□□□ -0.73
HDHD3-201ENST00000238379 LINC00242Q5T6M2 205 aa10.49□□□□□ -0.73
HDHD3-201ENST00000238379 B9D2Q9BPU9 175 aa10.49□□□□□ -0.73
HDHD3-201ENST00000238379 TRAV13-1A0A0B4J241 112 aa10.48□□□□□ -0.73
HDHD3-201ENST00000238379 TMEM262E9PQX1 116 aa10.48□□□□□ -0.73
HDHD3-201ENST00000238379 RBX1P62877 108 aa10.48□□□□□ -0.73
HDHD3-201ENST00000238379 MPV17L2Q567V2 206 aa10.48□□□□□ -0.73
HDHD3-201ENST00000238379 LELP1Q5T871 98 aa10.48□□□□□ -0.73
HDHD3-201ENST00000238379 IGLV5-45A0A087WSX0 123 aa10.47□□□□□ -0.73
HDHD3-201ENST00000238379 COX6A2Q02221 97 aa10.47□□□□□ -0.73
HDHD3-201ENST00000238379 LYPD5Q6UWN5 251 aa10.47□□□□□ -0.73
HDHD3-201ENST00000238379 SNHG12Q9BXW3 62 aa10.47□□□□□ -0.73
HDHD3-201ENST00000238379 GEMIN7Q9H840 131 aaKnown RBP10.47□□□□□ -0.73
HDHD3-201ENST00000238379 SIVA1O15304 175 aa10.47□□□□□ -0.73
HDHD3-201ENST00000238379 M0R143 59 aa10.46□□□□□ -0.74
HDHD3-201ENST00000238379 SEC11AP67812 179 aa10.46□□□□□ -0.74
HDHD3-201ENST00000238379 LINC00469Q8N7U9 141 aa10.46□□□□□ -0.74
HDHD3-201ENST00000238379 CDKN2A-AS1Q9UH64 79 aa10.46□□□□□ -0.74
HDHD3-201ENST00000238379 TRAV10A0A0B4J240 114 aa10.45□□□□□ -0.74
HDHD3-201ENST00000238379 EREGO14944 169 aa10.45□□□□□ -0.74
HDHD3-201ENST00000238379 TSPEAR-AS2P59090 65 aa10.45□□□□□ -0.74
HDHD3-201ENST00000238379 HERVK_113P63121 156 aa10.45□□□□□ -0.74
HDHD3-201ENST00000238379 COL7A1Q02388 2944 aa10.45□□□□□ -0.74
HDHD3-201ENST00000238379 STAB2Q8WWQ8 2551 aa10.45□□□□□ -0.74
HDHD3-201ENST00000238379 HUWE1Q7Z6Z7 4374 aaKnown RBP10.44□□□□□ -0.74
HDHD3-201ENST00000238379 MYMXA0A1B0GTQ4 84 aa10.44□□□□□ -0.74
HDHD3-201ENST00000238379 LEPROTO15243 131 aa10.44□□□□□ -0.74
HDHD3-201ENST00000238379 IGHV3-64A0A075B6Q5 118 aa10.43□□□□□ -0.74
HDHD3-201ENST00000238379 J3QQQ9 107 aa10.43□□□□□ -0.74
HDHD3-201ENST00000238379 Q8N3U1 123 aa10.43□□□□□ -0.74
HDHD3-201ENST00000238379 HIGD1BQ9P298 99 aa10.43□□□□□ -0.74
HDHD3-201ENST00000238379 TRAV8-3A0A0A6YYJ7 113 aa10.42□□□□□ -0.74
HDHD3-201ENST00000238379 IGKV3OR2-268A0A0C4DH90 116 aa10.42□□□□□ -0.74
HDHD3-201ENST00000238379 IGHV3-30-3P0DP02 117 aa10.42□□□□□ -0.74
HDHD3-201ENST00000238379 IGHV1-58A0A0C4DH39 117 aa10.42□□□□□ -0.74
HDHD3-201ENST00000238379 ZNF815PA8K554 130 aa10.42□□□□□ -0.74
HDHD3-201ENST00000238379 H3BRM9 83 aa10.42□□□□□ -0.74
HDHD3-201ENST00000238379 SPINK8P0C7L1 97 aa10.42□□□□□ -0.74
HDHD3-201ENST00000238379 HINT1P49773 126 aaPredicted RBP10.42□□□□□ -0.74
HDHD3-201ENST00000238379 PLEKHB2Q96CS7 222 aa10.42□□□□□ -0.74
HDHD3-201ENST00000238379 LINC00959A0A1B0GUT2 108 aa10.41□□□□□ -0.74
HDHD3-201ENST00000238379 DNHD1Q96M86 4753 aa10.41□□□□□ -0.74
HDHD3-201ENST00000238379 LGALS3P17931 250 aaKnown RBP10.4□□□□□ -0.74
HDHD3-201ENST00000238379 ESRGQ1W209 222 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms