RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 LINC01587Q99440 93 aa11.17□□□□□ -0.62
DDX55-201ENST00000238146 CHCHD5Q9BSY4 110 aa11.17□□□□□ -0.62
DDX55-201ENST00000238146 DEFB136Q30KP8 78 aa11.16□□□□□ -0.62
DDX55-201ENST00000238146 SHISA2Q6UWI4 295 aa11.16□□□□□ -0.62
DDX55-201ENST00000238146 HERVK_113P63121 156 aa11.16□□□□□ -0.62
DDX55-201ENST00000238146 RS1O15537 224 aa11.15□□□□□ -0.62
DDX55-201ENST00000238146 C18orf65Q6ZTR6 163 aa11.15□□□□□ -0.62
DDX55-201ENST00000238146 PRORYQ9H606 182 aa11.15□□□□□ -0.62
DDX55-201ENST00000238146 SPTBN4Q9H254 2564 aa11.15□□□□□ -0.62
DDX55-201ENST00000238146 MEIG1Q5JSS6 88 aa11.15□□□□□ -0.62
DDX55-201ENST00000238146 ITPR1Q14643 2758 aa11.15□□□□□ -0.63
DDX55-201ENST00000238146 SMIM1B2RUZ4 78 aa11.14□□□□□ -0.63
DDX55-201ENST00000238146 NDUFA7O95182 113 aa11.14□□□□□ -0.63
DDX55-201ENST00000238146 ACYP1P07311 99 aa11.14□□□□□ -0.63
DDX55-201ENST00000238146 LINC00694P0DN24 101 aa11.14□□□□□ -0.63
DDX55-201ENST00000238146 ZNF702PQ9H963 129 aa11.14□□□□□ -0.63
DDX55-201ENST00000238146 MAP6D1Q9H9H5 199 aa11.12□□□□□ -0.63
DDX55-201ENST00000238146 VPREB3Q9UKI3 123 aa11.12□□□□□ -0.63
DDX55-201ENST00000238146 SMCR5Q8TEV8 140 aa11.12□□□□□ -0.63
DDX55-201ENST00000238146 TRAV13-1A0A0B4J241 112 aa11.12□□□□□ -0.63
DDX55-201ENST00000238146 DAZ2Q13117 558 aaKnown RBP11.12□□□□□ -0.63
DDX55-201ENST00000238146 FAM19A3Q7Z5A8 133 aa11.12□□□□□ -0.63
DDX55-201ENST00000238146 DAZ4Q86SG3 579 aaKnown RBP11.12□□□□□ -0.63
DDX55-201ENST00000238146 PRIMA1Q86XR5 153 aa11.12□□□□□ -0.63
DDX55-201ENST00000238146 SMIM20Q8N5G0 67 aa11.12□□□□□ -0.63
DDX55-201ENST00000238146 DAZ3Q9NR90 486 aaKnown RBP11.12□□□□□ -0.63
DDX55-201ENST00000238146 COPS9Q8WXC6 57 aa11.11□□□□□ -0.63
DDX55-201ENST00000238146 USP9YO00507 2555 aaPredicted RBP11.11□□□□□ -0.63
DDX55-201ENST00000238146 IMUPQ9GZP8 106 aa11.11□□□□□ -0.63
DDX55-201ENST00000238146 FAM236AA0A1B0GUQ0 79 aa11.1□□□□□ -0.63
DDX55-201ENST00000238146 FAM236BA0A1B0GV22 79 aa11.1□□□□□ -0.63
DDX55-201ENST00000238146 INSP01308 110 aa11.1□□□□□ -0.63
DDX55-201ENST00000238146 TRACP01848 142 aa11.1□□□□□ -0.63
DDX55-201ENST00000238146 NRGNQ92686 78 aa11.1□□□□□ -0.63
DDX55-201ENST00000238146 ZANQ9Y493 2812 aa11.1□□□□□ -0.63
DDX55-201ENST00000238146 LINC01356Q8N9X3 169 aa11.1□□□□□ -0.63
DDX55-201ENST00000238146 C22orf24Q9Y442 160 aa11.1□□□□□ -0.63
DDX55-201ENST00000238146 CSMD2Q7Z408 3487 aa11.09□□□□□ -0.63
DDX55-201ENST00000238146 BAALC-AS2P0C853 105 aa11.09□□□□□ -0.63
DDX55-201ENST00000238146 FAM218AQ96MZ4 157 aa11.09□□□□□ -0.63
DDX55-201ENST00000238146 F5H768 121 aa11.09□□□□□ -0.63
DDX55-201ENST00000238146 NTM-AS1Q6ZSK4 140 aa11.09□□□□□ -0.63
DDX55-201ENST00000238146 CSDC2Q9Y534 153 aaKnown RBP11.09□□□□□ -0.63
DDX55-201ENST00000238146 FAM110AQ9BQ89 295 aa11.08□□□□□ -0.64
DDX55-201ENST00000238146 LINC00643Q86TS7 51 aa11.08□□□□□ -0.64
DDX55-201ENST00000238146 MAPK1IP1LQ8NDC0 245 aa11.08□□□□□ -0.64
DDX55-201ENST00000238146 XCL2Q9UBD3 114 aa11.08□□□□□ -0.64
DDX55-201ENST00000238146 Q6YL49 198 aa11.07□□□□□ -0.64
DDX55-201ENST00000238146 SDIM1Q6ZPB5 146 aa11.07□□□□□ -0.64
DDX55-201ENST00000238146 C3orf56Q8N813 242 aa11.07□□□□□ -0.64
DDX55-201ENST00000238146 PEMTQ9UBM1 199 aa11.07□□□□□ -0.64
DDX55-201ENST00000238146 MXRA5Q9NR99 2828 aa11.06□□□□□ -0.64
DDX55-201ENST00000238146 CDC42SE2Q9NRR3 84 aa11.06□□□□□ -0.64
DDX55-201ENST00000238146 TRGV1A0A0A0MS02 117 aa11.06□□□□□ -0.64
DDX55-201ENST00000238146 HERV-K104P63124 156 aa11.06□□□□□ -0.64
DDX55-201ENST00000238146 Q96MF0 132 aa11.06□□□□□ -0.64
DDX55-201ENST00000238146 DSCR9P59020 149 aa11.05□□□□□ -0.64
DDX55-201ENST00000238146 RPL36AP83881 106 aaKnown RBP11.05□□□□□ -0.64
DDX55-201ENST00000238146 RPL36ALQ969Q0 106 aaKnown RBP11.05□□□□□ -0.64
DDX55-201ENST00000238146 J3QLI3 93 aa11.05□□□□□ -0.64
DDX55-201ENST00000238146 DYNLRB2Q8TF09 96 aa11.05□□□□□ -0.64
DDX55-201ENST00000238146 A0A096LNT2 108 aa11.04□□□□□ -0.64
DDX55-201ENST00000238146 DEFB114Q30KQ6 69 aa11.04□□□□□ -0.64
DDX55-201ENST00000238146 HIST2H2BCQ6DN03 193 aa11.04□□□□□ -0.64
DDX55-201ENST00000238146 HIST2H2BDQ6DRA6 164 aa11.04□□□□□ -0.64
DDX55-201ENST00000238146 C1orf158Q8N1D5 194 aa11.04□□□□□ -0.64
DDX55-201ENST00000238146 FAM222AQ5U5X8 452 aa11.04□□□□□ -0.64
DDX55-201ENST00000238146 IL17DQ8TAD2 202 aa11.04□□□□□ -0.64
DDX55-201ENST00000238146 C2CD3Q4AC94 2353 aa11.04□□□□□ -0.64
DDX55-201ENST00000238146 DOPEY1Q5JWR5 2465 aa11.04□□□□□ -0.64
DDX55-201ENST00000238146 FLNCQ14315 2725 aa11.04□□□□□ -0.64
DDX55-201ENST00000238146 K7EQD1 137 aa11.03□□□□□ -0.64
DDX55-201ENST00000238146 PPDPFQ9H3Y8 114 aa11.03□□□□□ -0.64
DDX55-201ENST00000238146 TRBV10-1A0A0K0K1A3 114 aa11.03□□□□□ -0.64
DDX55-201ENST00000238146 Q9HAA7 133 aa11.03□□□□□ -0.64
DDX55-201ENST00000238146 TMEM126AQ9H061 195 aa11.02□□□□□ -0.64
DDX55-201ENST00000238146 USP9XQ93008 2570 aaPredicted RBP11.02□□□□□ -0.64
DDX55-201ENST00000238146 CFAP46Q8IYW2 2715 aa11.02□□□□□ -0.65
DDX55-201ENST00000238146 RPL28P46779 137 aaKnown RBP11.02□□□□□ -0.65
DDX55-201ENST00000238146 Q6ZTI0 123 aa11.02□□□□□ -0.65
DDX55-201ENST00000238146 FSHBP01225 129 aa11.02□□□□□ -0.65
DDX55-201ENST00000238146 ODF3L2Q3SX64 289 aa11.02□□□□□ -0.65
DDX55-201ENST00000238146 MYO9AB2RTY4 2548 aa11.01□□□□□ -0.65
DDX55-201ENST00000238146 KHDC1LQ5JSQ8 128 aa11.01□□□□□ -0.65
DDX55-201ENST00000238146 LINC00337Q8N6G1 96 aa11.01□□□□□ -0.65
DDX55-201ENST00000238146 TRAV13-2A0A0B4J235 113 aa11.01□□□□□ -0.65
DDX55-201ENST00000238146 PF4P02776 101 aa11.01□□□□□ -0.65
DDX55-201ENST00000238146 INAFM2P0DMQ5 153 aa11.01□□□□□ -0.65
DDX55-201ENST00000238146 C4orf3Q8WVX3 66 aa11.01□□□□□ -0.65
DDX55-201ENST00000238146 MALP21145 153 aa11□□□□□ -0.65
DDX55-201ENST00000238146 IGKV2-28A0A075B6P5 120 aa11□□□□□ -0.65
DDX55-201ENST00000238146 IGKV2D-28P01615 120 aa11□□□□□ -0.65
DDX55-201ENST00000238146 GAGE2AQ6NT46 116 aa11□□□□□ -0.65
DDX55-201ENST00000238146 C5orf38Q86SI9 138 aa11□□□□□ -0.65
DDX55-201ENST00000238146 MIR7-3HGQ8N6C7 128 aa11□□□□□ -0.65
DDX55-201ENST00000238146 UTP20O75691 2785 aaKnown RBP10.99□□□□□ -0.65
DDX55-201ENST00000238146 CRPP02741 224 aa10.99□□□□□ -0.65
DDX55-201ENST00000238146 POLQO75417 2590 aa10.99□□□□□ -0.65
DDX55-201ENST00000238146 STHQ8IWL8 128 aa10.99□□□□□ -0.65
DDX55-201ENST00000238146 C3orf22Q8N5N4 141 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms