RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 ZNF876PQ49A33 203 aa8.56□□□□□ -1.04
TNFAIP1-201ENST00000226225 PRIMA1Q86XR5 153 aa8.55□□□□□ -1.04
TNFAIP1-201ENST00000226225 MUSTN1Q8IVN3 82 aa8.55□□□□□ -1.04
TNFAIP1-201ENST00000226225 SPXQ9BT56 116 aa8.55□□□□□ -1.04
TNFAIP1-201ENST00000226225 IGLV4-69A0A075B6H9 119 aa8.55□□□□□ -1.04
TNFAIP1-201ENST00000226225 CITED1Q99966 193 aa8.55□□□□□ -1.04
TNFAIP1-201ENST00000226225 SDHAF1A6NFY7 115 aa8.55□□□□□ -1.04
TNFAIP1-201ENST00000226225 IGHV3-30P01768 117 aa8.55□□□□□ -1.04
TNFAIP1-201ENST00000226225 IGHV3-30-5P0DP03 117 aa8.55□□□□□ -1.04
TNFAIP1-201ENST00000226225 PMVKQ15126 192 aa8.55□□□□□ -1.04
TNFAIP1-201ENST00000226225 MUC4Q99102 2169 aa8.54□□□□□ -1.04
TNFAIP1-201ENST00000226225 KLLNB2CW77 178 aa8.54□□□□□ -1.04
TNFAIP1-201ENST00000226225 CMC4P56277 68 aaPredicted RBP8.54□□□□□ -1.04
TNFAIP1-201ENST00000226225 ATP6V0E2Q8NHE4 81 aa8.54□□□□□ -1.04
TNFAIP1-201ENST00000226225 RBMY1BA6NDE4 496 aaKnown RBP8.54□□□□□ -1.04
TNFAIP1-201ENST00000226225 RBMY1EA6NEQ0 496 aaKnown RBP8.54□□□□□ -1.04
TNFAIP1-201ENST00000226225 RBMY1DP0C7P1 496 aaKnown RBP8.54□□□□□ -1.04
TNFAIP1-201ENST00000226225 A8MZ25 164 aa8.53□□□□□ -1.04
TNFAIP1-201ENST00000226225 SUMO4Q6EEV6 95 aa8.53□□□□□ -1.04
TNFAIP1-201ENST00000226225 TRGV11A0A075B6L2 103 aa8.53□□□□□ -1.04
TNFAIP1-201ENST00000226225 CEMP1Q6PRD7 247 aaPredicted RBP8.53□□□□□ -1.04
TNFAIP1-201ENST00000226225 A0A0J9YXV3 536 aa8.53□□□□□ -1.04
TNFAIP1-201ENST00000226225 DAND5Q8N907 189 aa8.53□□□□□ -1.04
TNFAIP1-201ENST00000226225 C15orf53Q8NAA6 179 aa8.53□□□□□ -1.04
TNFAIP1-201ENST00000226225 IGHV3-53P01767 116 aa8.52□□□□□ -1.05
TNFAIP1-201ENST00000226225 TRGV1A0A0A0MS02 117 aa8.52□□□□□ -1.05
TNFAIP1-201ENST00000226225 TRAV8-4A0A0B4J246 113 aa8.52□□□□□ -1.05
TNFAIP1-201ENST00000226225 RNASE3P12724 160 aaKnown RBP8.52□□□□□ -1.05
TNFAIP1-201ENST00000226225 TRAV8-3A0A0A6YYJ7 113 aa8.52□□□□□ -1.05
TNFAIP1-201ENST00000226225 NDUFV3P56181 108 aaKnown RBP8.52□□□□□ -1.05
TNFAIP1-201ENST00000226225 HERV-K104P63124 156 aa8.52□□□□□ -1.05
TNFAIP1-201ENST00000226225 SHISA2Q6UWI4 295 aa8.52□□□□□ -1.05
TNFAIP1-201ENST00000226225 CLEC2BQ92478 149 aa8.52□□□□□ -1.05
TNFAIP1-201ENST00000226225 SLC25A29Q8N8R3 303 aa8.51□□□□□ -1.05
TNFAIP1-201ENST00000226225 TRBV7-9A0A0J9YWB2 115 aa8.51□□□□□ -1.05
TNFAIP1-201ENST00000226225 TMEM262E9PQX1 116 aa8.51□□□□□ -1.05
TNFAIP1-201ENST00000226225 FBN1P35555 2871 aaKnown RBP8.51□□□□□ -1.05
TNFAIP1-201ENST00000226225 EIF4EBP3O60516 100 aaPredicted RBP8.5□□□□□ -1.05
TNFAIP1-201ENST00000226225 NHLRC4P0CG21 123 aaPredicted RBP8.5□□□□□ -1.05
TNFAIP1-201ENST00000226225 C2orf82Q6UX34 121 aa8.5□□□□□ -1.05
TNFAIP1-201ENST00000226225 IGHV3-16A0A0C4DH30 117 aa8.5□□□□□ -1.05
TNFAIP1-201ENST00000226225 IFITM1P13164 125 aa8.5□□□□□ -1.05
TNFAIP1-201ENST00000226225 TRGV2A0A075B6R0 118 aa8.5□□□□□ -1.05
TNFAIP1-201ENST00000226225 GAGE12JA6NER3 117 aa8.5□□□□□ -1.05
TNFAIP1-201ENST00000226225 GAGE7O76087 117 aa8.5□□□□□ -1.05
TNFAIP1-201ENST00000226225 IGHV3-33P01772 117 aa8.5□□□□□ -1.05
TNFAIP1-201ENST00000226225 GAGE12FP0CL80 117 aa8.5□□□□□ -1.05
TNFAIP1-201ENST00000226225 GAGE12GP0CL81 117 aa8.5□□□□□ -1.05
TNFAIP1-201ENST00000226225 GAGE12IP0CL82 117 aa8.5□□□□□ -1.05
TNFAIP1-201ENST00000226225 RBMY1A1P0DJD3 496 aaKnown RBP8.5□□□□□ -1.05
TNFAIP1-201ENST00000226225 RBMY1CP0DJD4 496 aa8.5□□□□□ -1.05
TNFAIP1-201ENST00000226225 GAGE4Q13068 117 aa8.5□□□□□ -1.05
TNFAIP1-201ENST00000226225 RBMY1FQ15415 496 aaKnown RBP8.5□□□□□ -1.05
TNFAIP1-201ENST00000226225 PRB2P02812 416 aaPredicted RBP8.49□□□□□ -1.05
TNFAIP1-201ENST00000226225 ZNF415Q09FC8 603 aa8.49□□□□□ -1.05
TNFAIP1-201ENST00000226225 ODF3Q96PU9 254 aa8.49□□□□□ -1.05
TNFAIP1-201ENST00000226225 IGIPA6NJ69 53 aa8.49□□□□□ -1.05
TNFAIP1-201ENST00000226225 ZNF625Q96I27 306 aaPredicted RBP8.49□□□□□ -1.05
TNFAIP1-201ENST00000226225 IGKV3OR2-268A0A0C4DH90 116 aa8.49□□□□□ -1.05
TNFAIP1-201ENST00000226225 VCYO14598 125 aa8.49□□□□□ -1.05
TNFAIP1-201ENST00000226225 DEFB4AO15263 64 aa8.49□□□□□ -1.05
TNFAIP1-201ENST00000226225 DEFB135Q30KP9 77 aa8.49□□□□□ -1.05
TNFAIP1-201ENST00000226225 LINC01620Q4KN68 170 aa8.49□□□□□ -1.05
TNFAIP1-201ENST00000226225 CHCHD5Q9BSY4 110 aa8.49□□□□□ -1.05
TNFAIP1-201ENST00000226225 P0DMU3 169 aa8.48□□□□□ -1.05
TNFAIP1-201ENST00000226225 FAM231AP0DMU4 169 aa8.48□□□□□ -1.05
TNFAIP1-201ENST00000226225 FAM231CP0DMU5 169 aa8.48□□□□□ -1.05
TNFAIP1-201ENST00000226225 DEFB130BP0DP73 79 aa8.48□□□□□ -1.05
TNFAIP1-201ENST00000226225 DEFB130AP0DP74 79 aa8.48□□□□□ -1.05
TNFAIP1-201ENST00000226225 CFAP161Q6P656 301 aa8.48□□□□□ -1.05
TNFAIP1-201ENST00000226225 FAM19A4Q96LR4 140 aa8.48□□□□□ -1.05
TNFAIP1-201ENST00000226225 NOP10Q9NPE3 64 aaKnown RBP8.48□□□□□ -1.05
TNFAIP1-201ENST00000226225 IGHV4-4A0A075B6R2 117 aa8.48□□□□□ -1.05
TNFAIP1-201ENST00000226225 TRIAP1O43715 76 aa8.48□□□□□ -1.05
TNFAIP1-201ENST00000226225 VCX2Q9H322 139 aa8.48□□□□□ -1.05
TNFAIP1-201ENST00000226225 ATXN8Q156A1 80 aa8.48□□□□□ -1.05
TNFAIP1-201ENST00000226225 DEFB121Q5J5C9 76 aa8.48□□□□□ -1.05
TNFAIP1-201ENST00000226225 BEAN1Q3B7T3 259 aa8.47□□□□□ -1.05
TNFAIP1-201ENST00000226225 UBE2WQ96B02 151 aa8.47□□□□□ -1.05
TNFAIP1-201ENST00000226225 MEIG1Q5JSS6 88 aa8.47□□□□□ -1.05
TNFAIP1-201ENST00000226225 PAPPA-AS1Q5QFB9 102 aa8.47□□□□□ -1.05
TNFAIP1-201ENST00000226225 TRRAPQ9Y4A5 3859 aa8.46□□□□□ -1.05
TNFAIP1-201ENST00000226225 RHODO00212 210 aa8.46□□□□□ -1.06
TNFAIP1-201ENST00000226225 TMEM263Q8WUH6 116 aaKnown RBP8.46□□□□□ -1.06
TNFAIP1-201ENST00000226225 NBEAL1Q6ZS30 2694 aa8.45□□□□□ -1.06
TNFAIP1-201ENST00000226225 C1orf158Q8N1D5 194 aa8.45□□□□□ -1.06
TNFAIP1-201ENST00000226225 RS1O15537 224 aa8.45□□□□□ -1.06
TNFAIP1-201ENST00000226225 M0R2P5 195 aa8.44□□□□□ -1.06
TNFAIP1-201ENST00000226225 HTN3P15516 51 aa8.44□□□□□ -1.06
TNFAIP1-201ENST00000226225 ZNF22P17026 224 aaPredicted RBP8.44□□□□□ -1.06
TNFAIP1-201ENST00000226225 MRAPQ8TCY5 172 aa8.44□□□□□ -1.06
TNFAIP1-201ENST00000226225 IGHV3-38A0A0C4DH36 116 aa8.44□□□□□ -1.06
TNFAIP1-201ENST00000226225 PPP1R17O96001 155 aa8.44□□□□□ -1.06
TNFAIP1-201ENST00000226225 POLR2KP53803 58 aaKnown RBP8.44□□□□□ -1.06
TNFAIP1-201ENST00000226225 ADAMTSL4-AS1Q5T5F5 129 aa8.44□□□□□ -1.06
TNFAIP1-201ENST00000226225 AMELXQ99217 191 aa8.44□□□□□ -1.06
TNFAIP1-201ENST00000226225 A0A0J9YXY3 114 aa8.43□□□□□ -1.06
TNFAIP1-201ENST00000226225 LINC00315P59091 139 aa8.43□□□□□ -1.06
TNFAIP1-201ENST00000226225 TIMM21Q9BVV7 248 aa8.43□□□□□ -1.06
TNFAIP1-201ENST00000226225 IGHV3-30-3P0DP02 117 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms