RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 RPL39P62891 51 aaKnown RBP9.52□□□□□ -0.89
SUPT4H1-201ENST00000225504 MRPL52Q86TS9 123 aaKnown RBP9.52□□□□□ -0.89
SUPT4H1-201ENST00000225504 C1orf43Q9BWL3 253 aa9.52□□□□□ -0.89
SUPT4H1-201ENST00000225504 MAP1LC3AQ9H492 121 aa9.52□□□□□ -0.89
SUPT4H1-201ENST00000225504 FABP9Q0Z7S8 132 aa9.51□□□□□ -0.89
SUPT4H1-201ENST00000225504 CBLN2Q8IUK8 224 aa9.51□□□□□ -0.89
SUPT4H1-201ENST00000225504 Q8N8P6 123 aa9.51□□□□□ -0.89
SUPT4H1-201ENST00000225504 ALKBH7Q9BT30 221 aaPredicted RBP9.51□□□□□ -0.89
SUPT4H1-201ENST00000225504 COX11Q9Y6N1 276 aa9.51□□□□□ -0.89
SUPT4H1-201ENST00000225504 PKHD1P08F94 4074 aa9.51□□□□□ -0.89
SUPT4H1-201ENST00000225504 ZNF25P17030 456 aaPredicted RBP9.5□□□□□ -0.89
SUPT4H1-201ENST00000225504 COX19Q49B96 90 aa9.5□□□□□ -0.89
SUPT4H1-201ENST00000225504 OR5A1Q8NGJ0 315 aa9.5□□□□□ -0.89
SUPT4H1-201ENST00000225504 CDC42SE2Q9NRR3 84 aa9.5□□□□□ -0.89
SUPT4H1-201ENST00000225504 UBE2D4Q9Y2X8 147 aa9.5□□□□□ -0.89
SUPT4H1-201ENST00000225504 EREGO14944 169 aa9.49□□□□□ -0.89
SUPT4H1-201ENST00000225504 RAB5AP20339 215 aa9.49□□□□□ -0.89
SUPT4H1-201ENST00000225504 IFI27P40305 119 aaPredicted RBP9.49□□□□□ -0.89
SUPT4H1-201ENST00000225504 FAM104AQ969W3 186 aa9.49□□□□□ -0.89
SUPT4H1-201ENST00000225504 TMEM101Q96IK0 257 aa9.49□□□□□ -0.89
SUPT4H1-201ENST00000225504 MT-ND6P03923 174 aa9.48□□□□□ -0.89
SUPT4H1-201ENST00000225504 RNASE13Q5GAN3 156 aaKnown RBP9.48□□□□□ -0.89
SUPT4H1-201ENST00000225504 ZNF664Q8N3J9 261 aa9.48□□□□□ -0.89
SUPT4H1-201ENST00000225504 Q8N814 137 aa9.48□□□□□ -0.89
SUPT4H1-201ENST00000225504 OPRPNQ99935 248 aaPredicted RBP9.48□□□□□ -0.89
SUPT4H1-201ENST00000225504 TRAPPC1Q9Y5R8 145 aa9.48□□□□□ -0.89
SUPT4H1-201ENST00000225504 DYNC1H1Q14204 4646 aaKnown RBP9.47□□□□□ -0.89
SUPT4H1-201ENST00000225504 TRAV8-4A0A0B4J246 113 aa9.47□□□□□ -0.89
SUPT4H1-201ENST00000225504 C16orf90A8MZG2 172 aa9.47□□□□□ -0.89
SUPT4H1-201ENST00000225504 DGAT2L7PQ6IED9 249 aa9.47□□□□□ -0.89
SUPT4H1-201ENST00000225504 SMCO4Q9NRQ5 59 aa9.47□□□□□ -0.89
SUPT4H1-201ENST00000225504 PGPEP1Q9NXJ5 209 aa9.47□□□□□ -0.89
SUPT4H1-201ENST00000225504 LINC00959A0A1B0GUT2 108 aa9.47□□□□□ -0.89
SUPT4H1-201ENST00000225504 TIMM21Q9BVV7 248 aa9.47□□□□□ -0.89
SUPT4H1-201ENST00000225504 CSDC2Q9Y534 153 aaKnown RBP9.47□□□□□ -0.89
SUPT4H1-201ENST00000225504 GAGE12HA6NDE8 117 aa9.46□□□□□ -0.9
SUPT4H1-201ENST00000225504 Q6ZUT4 128 aa9.46□□□□□ -0.9
SUPT4H1-201ENST00000225504 TMEM18Q96B42 140 aa9.46□□□□□ -0.9
SUPT4H1-201ENST00000225504 NXT2Q9NPJ8 142 aaKnown RBP9.46□□□□□ -0.9
SUPT4H1-201ENST00000225504 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.45□□□□□ -0.9
SUPT4H1-201ENST00000225504 USP17L23D6RBM5 183 aa9.45□□□□□ -0.9
SUPT4H1-201ENST00000225504 PRSS3P2Q8NHM4 247 aa9.45□□□□□ -0.9
SUPT4H1-201ENST00000225504 CHCHD10Q8WYQ3 142 aaPredicted RBP9.45□□□□□ -0.9
SUPT4H1-201ENST00000225504 ATP6V1G1O75348 118 aa9.44□□□□□ -0.9
SUPT4H1-201ENST00000225504 CCL25O15444 150 aa9.43□□□□□ -0.9
SUPT4H1-201ENST00000225504 SPANXA1Q9NS26 97 aa9.43□□□□□ -0.9
SUPT4H1-201ENST00000225504 KIAA1109Q2LD37 5005 aa9.42□□□□□ -0.9
SUPT4H1-201ENST00000225504 SCO1O75880 301 aa9.42□□□□□ -0.9
SUPT4H1-201ENST00000225504 S100A6P06703 90 aa9.42□□□□□ -0.9
SUPT4H1-201ENST00000225504 PRSS1P07477 247 aa9.42□□□□□ -0.9
SUPT4H1-201ENST00000225504 XCL1P47992 114 aa9.42□□□□□ -0.9
SUPT4H1-201ENST00000225504 KRTAP10-1P60331 282 aa9.42□□□□□ -0.9
SUPT4H1-201ENST00000225504 SMAGPQ0VAQ4 97 aa9.42□□□□□ -0.9
SUPT4H1-201ENST00000225504 ORMDL2Q53FV1 153 aa9.42□□□□□ -0.9
SUPT4H1-201ENST00000225504 C2orf66Q6UXQ4 117 aa9.42□□□□□ -0.9
SUPT4H1-201ENST00000225504 NTN5Q8WTR8 489 aaPredicted RBP9.42□□□□□ -0.9
SUPT4H1-201ENST00000225504 IGLV5-52A0A0A0MRZ9 124 aa9.41□□□□□ -0.9
SUPT4H1-201ENST00000225504 TRAV13-1A0A0B4J241 112 aa9.41□□□□□ -0.9
SUPT4H1-201ENST00000225504 LINC01546A6NGU7 62 aa9.41□□□□□ -0.9
SUPT4H1-201ENST00000225504 K7EMI3 77 aa9.41□□□□□ -0.9
SUPT4H1-201ENST00000225504 FOXI1Q12951 378 aa9.41□□□□□ -0.9
SUPT4H1-201ENST00000225504 C18orf32Q8TCD1 76 aa9.41□□□□□ -0.9
SUPT4H1-201ENST00000225504 URB1-AS1Q96HZ7 61 aa9.41□□□□□ -0.9
SUPT4H1-201ENST00000225504 PYGO1Q9Y3Y4 419 aa9.41□□□□□ -0.9
SUPT4H1-201ENST00000225504 DNAH5Q8TE73 4624 aa9.41□□□□□ -0.9
SUPT4H1-201ENST00000225504 IGLV4-3A0A075B6K6 122 aa9.4□□□□□ -0.9
SUPT4H1-201ENST00000225504 COLCA2A8K830 154 aa9.4□□□□□ -0.9
SUPT4H1-201ENST00000225504 MRPS36P82909 103 aaKnown RBP9.4□□□□□ -0.9
SUPT4H1-201ENST00000225504 SS18Q15532 418 aa9.4□□□□□ -0.9
SUPT4H1-201ENST00000225504 LINC01620Q4KN68 170 aa9.4□□□□□ -0.9
SUPT4H1-201ENST00000225504 ZC2HC1BQ5TFG8 222 aa9.4□□□□□ -0.9
SUPT4H1-201ENST00000225504 CDPF1Q6NVV7 123 aa9.4□□□□□ -0.9
SUPT4H1-201ENST00000225504 CYSLTR1Q9Y271 337 aa9.4□□□□□ -0.9
SUPT4H1-201ENST00000225504 IGIPA6NJ69 53 aa9.4□□□□□ -0.91
SUPT4H1-201ENST00000225504 GCSHP23434 173 aa9.4□□□□□ -0.91
SUPT4H1-201ENST00000225504 C15orf56Q8N910 161 aa9.39□□□□□ -0.91
SUPT4H1-201ENST00000225504 C1orf196B1AJZ1 125 aa9.38□□□□□ -0.91
SUPT4H1-201ENST00000225504 FA2HQ7L5A8 372 aa9.38□□□□□ -0.91
SUPT4H1-201ENST00000225504 TOMM6Q96B49 74 aa9.38□□□□□ -0.91
SUPT4H1-201ENST00000225504 LRP1BQ9NZR2 4599 aa9.37□□□□□ -0.91
SUPT4H1-201ENST00000225504 SLPIP03973 132 aa9.37□□□□□ -0.91
SUPT4H1-201ENST00000225504 TRGC2P03986 189 aa9.37□□□□□ -0.91
SUPT4H1-201ENST00000225504 C14orf177Q52M58 125 aa9.37□□□□□ -0.91
SUPT4H1-201ENST00000225504 CD164L2Q6UWJ8 174 aa9.37□□□□□ -0.91
SUPT4H1-201ENST00000225504 TMEM141Q96I45 108 aa9.37□□□□□ -0.91
SUPT4H1-201ENST00000225504 IFITM10A6NMD0 228 aa9.36□□□□□ -0.91
SUPT4H1-201ENST00000225504 LINC00614P0C842 121 aa9.36□□□□□ -0.91
SUPT4H1-201ENST00000225504 LINC00173Q6ZV60 143 aa9.36□□□□□ -0.91
SUPT4H1-201ENST00000225504 A0A096LNJ9 63 aa9.35□□□□□ -0.91
SUPT4H1-201ENST00000225504 hDV102S1A0JD36 115 aa9.35□□□□□ -0.91
SUPT4H1-201ENST00000225504 HIGD2BQ4VC39 106 aa9.35□□□□□ -0.91
SUPT4H1-201ENST00000225504 AMELXQ99217 191 aa9.35□□□□□ -0.91
SUPT4H1-201ENST00000225504 G0S2P27469 103 aa9.34□□□□□ -0.91
SUPT4H1-201ENST00000225504 COX6A2Q02221 97 aa9.34□□□□□ -0.91
SUPT4H1-201ENST00000225504 PMCHL1Q16048 86 aa9.34□□□□□ -0.91
SUPT4H1-201ENST00000225504 C5orf38Q86SI9 138 aa9.34□□□□□ -0.91
SUPT4H1-201ENST00000225504 LINC00526Q96FQ7 95 aa9.34□□□□□ -0.91
SUPT4H1-201ENST00000225504 SCGB3A1Q96QR1 104 aa9.34□□□□□ -0.91
SUPT4H1-201ENST00000225504 KRTAP17-1Q9BYP8 105 aa9.34□□□□□ -0.91
SUPT4H1-201ENST00000225504 VCX2Q9H322 139 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms