RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 TIMM21Q9BVV7 248 aa13.62□□□□□ -0.23
RHBDD3-201ENST00000216085 AP5S1Q9NUS5 200 aa13.62□□□□□ -0.23
RHBDD3-201ENST00000216085 CSDC2Q9Y534 153 aaKnown RBP13.62□□□□□ -0.23
RHBDD3-201ENST00000216085 Q9HAA7 133 aa13.61□□□□□ -0.23
RHBDD3-201ENST00000216085 SPANXA1Q9NS26 97 aa13.61□□□□□ -0.23
RHBDD3-201ENST00000216085 HYDINQ4G0P3 5121 aa13.61□□□□□ -0.23
RHBDD3-201ENST00000216085 IGLV4-60A0A075B6I1 120 aa13.6□□□□□ -0.23
RHBDD3-201ENST00000216085 LINC01549A6NIU2 74 aa13.6□□□□□ -0.23
RHBDD3-201ENST00000216085 COA6Q5JTJ3 125 aaKnown RBP13.6□□□□□ -0.23
RHBDD3-201ENST00000216085 LINC00269Q8N2A0 174 aa13.6□□□□□ -0.23
RHBDD3-201ENST00000216085 UBE2D4Q9Y2X8 147 aa13.6□□□□□ -0.23
RHBDD3-201ENST00000216085 LINC01546A6NGU7 62 aa13.6□□□□□ -0.23
RHBDD3-201ENST00000216085 LINC00614P0C842 121 aa13.6□□□□□ -0.23
RHBDD3-201ENST00000216085 RPL39P62891 51 aaKnown RBP13.6□□□□□ -0.23
RHBDD3-201ENST00000216085 MIAQ16674 131 aa13.6□□□□□ -0.23
RHBDD3-201ENST00000216085 C2orf66Q6UXQ4 117 aa13.6□□□□□ -0.23
RHBDD3-201ENST00000216085 AKR1D1P51857 326 aa13.59□□□□□ -0.23
RHBDD3-201ENST00000216085 REG3AQ06141 175 aa13.59□□□□□ -0.23
RHBDD3-201ENST00000216085 BAGE3Q86Y29 109 aa13.59□□□□□ -0.23
RHBDD3-201ENST00000216085 TM2D2Q9BX73 214 aa13.59□□□□□ -0.23
RHBDD3-201ENST00000216085 COX11Q9Y6N1 276 aa13.59□□□□□ -0.23
RHBDD3-201ENST00000216085 S100A12P80511 92 aa13.58□□□□□ -0.23
RHBDD3-201ENST00000216085 PRR34Q9NV39 138 aa13.58□□□□□ -0.23
RHBDD3-201ENST00000216085 CLPSL2Q6UWE3 100 aa13.58□□□□□ -0.24
RHBDD3-201ENST00000216085 PSCAO43653 123 aa13.57□□□□□ -0.24
RHBDD3-201ENST00000216085 ZNF664Q8N3J9 261 aa13.57□□□□□ -0.24
RHBDD3-201ENST00000216085 CHCHD1Q96BP2 118 aaKnown RBP13.57□□□□□ -0.24
RHBDD3-201ENST00000216085 C1orf43Q9BWL3 253 aa13.57□□□□□ -0.24
RHBDD3-201ENST00000216085 CDC42SE2Q9NRR3 84 aa13.56□□□□□ -0.24
RHBDD3-201ENST00000216085 PYGO1Q9Y3Y4 419 aa13.56□□□□□ -0.24
RHBDD3-201ENST00000216085 TRAV8-4A0A0B4J246 113 aa13.55□□□□□ -0.24
RHBDD3-201ENST00000216085 S100A2P29034 98 aa13.55□□□□□ -0.24
RHBDD3-201ENST00000216085 ENHOQ6UWT2 76 aa13.55□□□□□ -0.24
RHBDD3-201ENST00000216085 HIST3H2BBQ8N257 126 aa13.55□□□□□ -0.24
RHBDD3-201ENST00000216085 IGKV2D-24A0A075B6R9 120 aa13.55□□□□□ -0.24
RHBDD3-201ENST00000216085 TOMM6Q96B49 74 aa13.55□□□□□ -0.24
RHBDD3-201ENST00000216085 IGKV3OR2-268A0A0C4DH90 116 aa13.54□□□□□ -0.24
RHBDD3-201ENST00000216085 NPSP0C0P6 89 aa13.54□□□□□ -0.24
RHBDD3-201ENST00000216085 MRPS36P82909 103 aaKnown RBP13.54□□□□□ -0.24
RHBDD3-201ENST00000216085 Q6ZN92 141 aa13.54□□□□□ -0.24
RHBDD3-201ENST00000216085 LINC00336Q6ZUF6 198 aa13.54□□□□□ -0.24
RHBDD3-201ENST00000216085 RYR3Q15413 4870 aa13.54□□□□□ -0.24
RHBDD3-201ENST00000216085 PAPPA-AS1Q5QFB9 102 aa13.53□□□□□ -0.24
RHBDD3-201ENST00000216085 HBDP02042 147 aa13.53□□□□□ -0.24
RHBDD3-201ENST00000216085 Q6ZUT4 128 aa13.53□□□□□ -0.24
RHBDD3-201ENST00000216085 HSBP1O75506 76 aa13.52□□□□□ -0.25
RHBDD3-201ENST00000216085 URB1-AS1Q96HZ7 61 aa13.52□□□□□ -0.25
RHBDD3-201ENST00000216085 TMEM141Q96I45 108 aa13.52□□□□□ -0.25
RHBDD3-201ENST00000216085 RTL8CO15255 209 aa13.51□□□□□ -0.25
RHBDD3-201ENST00000216085 SCGB3A1Q96QR1 104 aa13.51□□□□□ -0.25
RHBDD3-201ENST00000216085 TIMM17AQ99595 171 aa13.51□□□□□ -0.25
RHBDD3-201ENST00000216085 PDZD11Q5EBL8 140 aa13.5□□□□□ -0.25
RHBDD3-201ENST00000216085 Q6ZRN7 208 aaPredicted RBP13.5□□□□□ -0.25
RHBDD3-201ENST00000216085 ERASQ7Z444 233 aa13.5□□□□□ -0.25
RHBDD3-201ENST00000216085 IFITM10A6NMD0 228 aa13.5□□□□□ -0.25
RHBDD3-201ENST00000216085 CCL25O15444 150 aa13.5□□□□□ -0.25
RHBDD3-201ENST00000216085 SS18Q15532 418 aa13.5□□□□□ -0.25
RHBDD3-201ENST00000216085 TEX43Q6ZNM6 134 aa13.5□□□□□ -0.25
RHBDD3-201ENST00000216085 C2orf88Q9BSF0 95 aa13.5□□□□□ -0.25
RHBDD3-201ENST00000216085 DNAH2Q9P225 4427 aa13.5□□□□□ -0.25
RHBDD3-201ENST00000216085 IGLV4-3A0A075B6K6 122 aa13.49□□□□□ -0.25
RHBDD3-201ENST00000216085 RNASE13Q5GAN3 156 aaKnown RBP13.49□□□□□ -0.25
RHBDD3-201ENST00000216085 IGLV10-54A0A075B6I4 117 aa13.48□□□□□ -0.25
RHBDD3-201ENST00000216085 IGIPA6NJ69 53 aa13.48□□□□□ -0.25
RHBDD3-201ENST00000216085 VCX2Q9H322 139 aa13.48□□□□□ -0.25
RHBDD3-201ENST00000216085 LINC00959A0A1B0GUT2 108 aa13.47□□□□□ -0.25
RHBDD3-201ENST00000216085 PRSS29PA6NIE9 313 aa13.47□□□□□ -0.25
RHBDD3-201ENST00000216085 PCP4L1A6NKN8 68 aa13.47□□□□□ -0.25
RHBDD3-201ENST00000216085 SERF1AO75920 110 aa13.47□□□□□ -0.25
RHBDD3-201ENST00000216085 SMIM6P0DI80 62 aa13.47□□□□□ -0.25
RHBDD3-201ENST00000216085 FABP4P15090 132 aa13.47□□□□□ -0.25
RHBDD3-201ENST00000216085 PMCHL1Q16048 86 aa13.47□□□□□ -0.25
RHBDD3-201ENST00000216085 HIST1H2BLQ99880 126 aa13.47□□□□□ -0.25
RHBDD3-201ENST00000216085 OPRPNQ99935 248 aaPredicted RBP13.47□□□□□ -0.25
RHBDD3-201ENST00000216085 TRAV13-1A0A0B4J241 112 aa13.46□□□□□ -0.25
RHBDD3-201ENST00000216085 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.46□□□□□ -0.25
RHBDD3-201ENST00000216085 EREGO14944 169 aa13.46□□□□□ -0.25
RHBDD3-201ENST00000216085 CHCHD10Q8WYQ3 142 aaPredicted RBP13.45□□□□□ -0.26
RHBDD3-201ENST00000216085 ATP5LO75964 103 aa13.45□□□□□ -0.26
RHBDD3-201ENST00000216085 OR10D4PQ8NGN7 298 aa13.45□□□□□ -0.26
RHBDD3-201ENST00000216085 PACRGQ96M98 296 aaPredicted RBP13.45□□□□□ -0.26
RHBDD3-201ENST00000216085 A0A096LNJ9 63 aa13.44□□□□□ -0.26
RHBDD3-201ENST00000216085 FRAS1Q86XX4 4008 aa13.44□□□□□ -0.26
RHBDD3-201ENST00000216085 XCL1P47992 114 aa13.43□□□□□ -0.26
RHBDD3-201ENST00000216085 FAM104AQ969W3 186 aa13.43□□□□□ -0.26
RHBDD3-201ENST00000216085 C12orf57Q99622 126 aa13.43□□□□□ -0.26
RHBDD3-201ENST00000216085 DNAH10Q8IVF4 4471 aa13.42□□□□□ -0.26
RHBDD3-201ENST00000216085 GAGE12HA6NDE8 117 aa13.42□□□□□ -0.26
RHBDD3-201ENST00000216085 TNP2Q05952 138 aa13.42□□□□□ -0.26
RHBDD3-201ENST00000216085 AMELXQ99217 191 aa13.42□□□□□ -0.26
RHBDD3-201ENST00000216085 LINC00310P59036 64 aa13.41□□□□□ -0.26
RHBDD3-201ENST00000216085 CD164L2Q6UWJ8 174 aa13.41□□□□□ -0.26
RHBDD3-201ENST00000216085 NUPR1O60356 82 aa13.4□□□□□ -0.26
RHBDD3-201ENST00000216085 FAM19A2Q8N3H0 131 aa13.4□□□□□ -0.26
RHBDD3-201ENST00000216085 A0A087WTM6 91 aa13.39□□□□□ -0.27
RHBDD3-201ENST00000216085 SEC11AP67812 179 aa13.39□□□□□ -0.27
RHBDD3-201ENST00000216085 PMVKQ15126 192 aa13.39□□□□□ -0.27
RHBDD3-201ENST00000216085 C14orf177Q52M58 125 aa13.39□□□□□ -0.27
RHBDD3-201ENST00000216085 KRTAP26-1Q6PEX3 210 aa13.39□□□□□ -0.27
RHBDD3-201ENST00000216085 BAALCQ8WXS3 180 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms