RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 CDKN2A-AS1Q9UH64 79 aa8.27□□□□□ -1.09
ACTN1-201ENST00000193403 IGHV1-58A0A0C4DH39 117 aa8.27□□□□□ -1.09
ACTN1-201ENST00000193403 TRBV7-9A0A0J9YWB2 115 aa8.27□□□□□ -1.09
ACTN1-201ENST00000193403 A0A0J9YX75 114 aa8.27□□□□□ -1.09
ACTN1-201ENST00000193403 KLLNB2CW77 178 aa8.27□□□□□ -1.09
ACTN1-201ENST00000193403 SOCS3O14543 225 aa8.27□□□□□ -1.09
ACTN1-201ENST00000193403 NSUN5P1Q3KNT7 163 aa8.27□□□□□ -1.09
ACTN1-201ENST00000193403 H7C423 109 aa8.26□□□□□ -1.09
ACTN1-201ENST00000193403 DEFB130BP0DP73 79 aa8.26□□□□□ -1.09
ACTN1-201ENST00000193403 DEFB130AP0DP74 79 aa8.26□□□□□ -1.09
ACTN1-201ENST00000193403 Q9UF83 564 aa8.26□□□□□ -1.09
ACTN1-201ENST00000193403 FLNAP21333 2647 aaKnown RBP8.26□□□□□ -1.09
ACTN1-201ENST00000193403 IGHG2P01859 326 aa8.26□□□□□ -1.09
ACTN1-201ENST00000193403 FBXL19-AS1Q494R0 122 aa8.26□□□□□ -1.09
ACTN1-201ENST00000193403 PFN2P35080 140 aa8.25□□□□□ -1.09
ACTN1-201ENST00000193403 LINC00158P58513 81 aa8.25□□□□□ -1.09
ACTN1-201ENST00000193403 CLPSL2Q6UWE3 100 aa8.25□□□□□ -1.09
ACTN1-201ENST00000193403 ZNF843Q8N446 348 aa8.25□□□□□ -1.09
ACTN1-201ENST00000193403 EDA2RQ9HAV5 297 aa8.25□□□□□ -1.09
ACTN1-201ENST00000193403 MIAQ16674 131 aa8.25□□□□□ -1.09
ACTN1-201ENST00000193403 LINC00467Q9BRT7 94 aa8.25□□□□□ -1.09
ACTN1-201ENST00000193403 Q9HAA7 133 aa8.25□□□□□ -1.09
ACTN1-201ENST00000193403 TRGV4A0A0C4DH28 118 aa8.24□□□□□ -1.09
ACTN1-201ENST00000193403 ZNF415Q09FC8 603 aa8.24□□□□□ -1.09
ACTN1-201ENST00000193403 POM121L12Q8N7R1 296 aa8.24□□□□□ -1.09
ACTN1-201ENST00000193403 DCANP1Q8TF63 244 aa8.24□□□□□ -1.09
ACTN1-201ENST00000193403 TRBV30A0A0K0K1B3 111 aa8.23□□□□□ -1.09
ACTN1-201ENST00000193403 NXPH4O95158 308 aa8.23□□□□□ -1.09
ACTN1-201ENST00000193403 MRPL23Q16540 153 aaKnown RBP8.23□□□□□ -1.09
ACTN1-201ENST00000193403 NDUFA7O95182 113 aa8.23□□□□□ -1.09
ACTN1-201ENST00000193403 BAALC-AS2P0C853 105 aa8.23□□□□□ -1.09
ACTN1-201ENST00000193403 VSIG2Q96IQ7 327 aa8.23□□□□□ -1.09
ACTN1-201ENST00000193403 ODF3Q96PU9 254 aa8.23□□□□□ -1.09
ACTN1-201ENST00000193403 TRBV6-5A0A0K0K1A5 114 aa8.22□□□□□ -1.09
ACTN1-201ENST00000193403 H3BT86 120 aa8.22□□□□□ -1.09
ACTN1-201ENST00000193403 EIF4EBP3O60516 100 aaPredicted RBP8.22□□□□□ -1.09
ACTN1-201ENST00000193403 HRNRQ86YZ3 2850 aaPredicted RBP8.22□□□□□ -1.09
ACTN1-201ENST00000193403 AMELXQ99217 191 aa8.22□□□□□ -1.09
ACTN1-201ENST00000193403 CRPP02741 224 aa8.22□□□□□ -1.09
ACTN1-201ENST00000193403 RPL32P62910 135 aaKnown RBP8.22□□□□□ -1.09
ACTN1-201ENST00000193403 C9orf85Q96MD7 179 aa8.22□□□□□ -1.09
ACTN1-201ENST00000193403 TMEM61Q8N0U2 210 aa8.21□□□□□ -1.09
ACTN1-201ENST00000193403 CITED1Q99966 193 aa8.21□□□□□ -1.09
ACTN1-201ENST00000193403 ESM1Q9NQ30 184 aa8.21□□□□□ -1.09
ACTN1-201ENST00000193403 PAX4O43316 350 aa8.21□□□□□ -1.1
ACTN1-201ENST00000193403 AVPP01185 164 aa8.21□□□□□ -1.1
ACTN1-201ENST00000193403 PIK3CD-AS1Q5SR53 167 aa8.21□□□□□ -1.1
ACTN1-201ENST00000193403 C18orf65Q6ZTR6 163 aa8.21□□□□□ -1.1
ACTN1-201ENST00000193403 PEMTQ9UBM1 199 aa8.2□□□□□ -1.1
ACTN1-201ENST00000193403 IGKV3D-7A0A0C4DH55 119 aa8.2□□□□□ -1.1
ACTN1-201ENST00000193403 A6NDX4 124 aa8.2□□□□□ -1.1
ACTN1-201ENST00000193403 NHLRC4P0CG21 123 aaPredicted RBP8.2□□□□□ -1.1
ACTN1-201ENST00000193403 TEX15Q9BXT5 2789 aa8.2□□□□□ -1.1
ACTN1-201ENST00000193403 K7EQG2 157 aa8.2□□□□□ -1.1
ACTN1-201ENST00000193403 KRTAP10-9P60411 292 aa8.2□□□□□ -1.1
ACTN1-201ENST00000193403 DAZ2Q13117 558 aaKnown RBP8.2□□□□□ -1.1
ACTN1-201ENST00000193403 DAZ4Q86SG3 579 aaKnown RBP8.2□□□□□ -1.1
ACTN1-201ENST00000193403 DAZ3Q9NR90 486 aaKnown RBP8.2□□□□□ -1.1
ACTN1-201ENST00000193403 TINCRA0A1B0GVN0 87 aa8.19□□□□□ -1.1
ACTN1-201ENST00000193403 LST1O00453 97 aa8.19□□□□□ -1.1
ACTN1-201ENST00000193403 RPL36AP83881 106 aaKnown RBP8.19□□□□□ -1.1
ACTN1-201ENST00000193403 SBSPONQ8IVN8 264 aa8.19□□□□□ -1.1
ACTN1-201ENST00000193403 RPL36ALQ969Q0 106 aaKnown RBP8.19□□□□□ -1.1
ACTN1-201ENST00000193403 H3BUA1 57 aa8.19□□□□□ -1.1
ACTN1-201ENST00000193403 Q6ZSN1 163 aa8.19□□□□□ -1.1
ACTN1-201ENST00000193403 SPANXA1Q9NS26 97 aa8.19□□□□□ -1.1
ACTN1-201ENST00000193403 HIST1H4AP62805 103 aaKnown RBP8.19□□□□□ -1.1
ACTN1-201ENST00000193403 LINC01356Q8N9X3 169 aa8.19□□□□□ -1.1
ACTN1-201ENST00000193403 C10orf105Q8TEF2 133 aa8.19□□□□□ -1.1
ACTN1-201ENST00000193403 SHISA2Q6UWI4 295 aa8.18□□□□□ -1.1
ACTN1-201ENST00000193403 SVIPQ8NHG7 77 aa8.18□□□□□ -1.1
ACTN1-201ENST00000193403 NOP10Q9NPE3 64 aaKnown RBP8.18□□□□□ -1.1
ACTN1-201ENST00000193403 Q96MF0 132 aa8.18□□□□□ -1.1
ACTN1-201ENST00000193403 K7EMT4 169 aa8.18□□□□□ -1.1
ACTN1-201ENST00000193403 PF4P02776 101 aa8.18□□□□□ -1.1
ACTN1-201ENST00000193403 LINC00308Q8TCZ7 52 aa8.18□□□□□ -1.1
ACTN1-201ENST00000193403 F8P00451 2351 aa8.17□□□□□ -1.1
ACTN1-201ENST00000193403 COPS9Q8WXC6 57 aa8.17□□□□□ -1.1
ACTN1-201ENST00000193403 INSP01308 110 aa8.17□□□□□ -1.1
ACTN1-201ENST00000193403 ATP5G1P05496 136 aa8.17□□□□□ -1.1
ACTN1-201ENST00000193403 MRPS36P82909 103 aaKnown RBP8.17□□□□□ -1.1
ACTN1-201ENST00000193403 FAM19A4Q96LR4 140 aa8.17□□□□□ -1.1
ACTN1-201ENST00000193403 C5orf38Q86SI9 138 aa8.17□□□□□ -1.1
ACTN1-201ENST00000193403 UBE2D4Q9Y2X8 147 aa8.16□□□□□ -1.1
ACTN1-201ENST00000193403 HERVK_113P63121 156 aa8.16□□□□□ -1.1
ACTN1-201ENST00000193403 RBMY1A1P0DJD3 496 aaKnown RBP8.16□□□□□ -1.1
ACTN1-201ENST00000193403 RBMY1CP0DJD4 496 aa8.16□□□□□ -1.1
ACTN1-201ENST00000193403 COX6A2Q02221 97 aa8.16□□□□□ -1.1
ACTN1-201ENST00000193403 RBMY1FQ15415 496 aaKnown RBP8.16□□□□□ -1.1
ACTN1-201ENST00000193403 KLK5Q9Y337 293 aaPredicted RBP8.15□□□□□ -1.1
ACTN1-201ENST00000193403 ATRQ13535 2644 aa8.15□□□□□ -1.1
ACTN1-201ENST00000193403 C14orf132Q9NPU4 83 aa8.15□□□□□ -1.1
ACTN1-201ENST00000193403 UNC79Q9P2D8 2635 aa8.15□□□□□ -1.11
ACTN1-201ENST00000193403 J3QKU1 62 aa8.15□□□□□ -1.11
ACTN1-201ENST00000193403 C6orf226Q5I0X4 101 aa8.15□□□□□ -1.11
ACTN1-201ENST00000193403 SDIM1Q6ZPB5 146 aa8.15□□□□□ -1.11
ACTN1-201ENST00000193403 COX7A2LO14548 114 aa8.14□□□□□ -1.11
ACTN1-201ENST00000193403 SPANXDQ9BXN6 97 aa8.14□□□□□ -1.11
ACTN1-201ENST00000193403 SPANXCQ9NY87 97 aa8.14□□□□□ -1.11
ACTN1-201ENST00000193403 DEFB4AO15263 64 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms