RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 MAP3K15Q6ZN16 1313 aa15.95■□□□□ 0.14
PHGDH-233ENST00000642021 AKAP11Q9UKA4 1901 aa15.95■□□□□ 0.14
PHGDH-233ENST00000642021 DDX60Q8IY21 1712 aaKnown RBP15.94■□□□□ 0.14
PHGDH-233ENST00000642021 ANKRD18BA2A2Z9 1011 aa15.94■□□□□ 0.14
PHGDH-233ENST00000642021 CDKL5O76039 1030 aa15.94■□□□□ 0.14
PHGDH-233ENST00000642021 SERPINC1P01008 464 aa15.94■□□□□ 0.14
PHGDH-233ENST00000642021 CTSWP56202 376 aa15.94■□□□□ 0.14
PHGDH-233ENST00000642021 GRIN1Q05586 938 aa15.94■□□□□ 0.14
PHGDH-233ENST00000642021 ZNF512BQ96KM6 892 aaPredicted RBP15.94■□□□□ 0.14
PHGDH-233ENST00000642021 EPB41L4AQ9HCS5 686 aaPredicted RBP15.94■□□□□ 0.14
PHGDH-233ENST00000642021 ZNF446Q9NWS9 450 aa15.94■□□□□ 0.14
PHGDH-233ENST00000642021 COL5A2P05997 1499 aaPredicted RBP15.94■□□□□ 0.14
PHGDH-233ENST00000642021 GOLGA8AA7E2F4 631 aa15.94■□□□□ 0.14
PHGDH-233ENST00000642021 KCNJ6P48051 423 aa15.94■□□□□ 0.14
PHGDH-233ENST00000642021 CFAP100Q494V2 611 aa15.94■□□□□ 0.14
PHGDH-233ENST00000642021 TMEM67Q5HYA8 995 aa15.94■□□□□ 0.14
PHGDH-233ENST00000642021 SLC26A6Q9BXS9 759 aa15.94■□□□□ 0.14
PHGDH-233ENST00000642021 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.94■□□□□ 0.14
PHGDH-233ENST00000642021 KCNH3Q9ULD8 1083 aa15.94■□□□□ 0.14
PHGDH-233ENST00000642021 DCCP43146 1447 aa15.94■□□□□ 0.14
PHGDH-233ENST00000642021 BTBD18B2RXH4 712 aa15.93■□□□□ 0.14
PHGDH-233ENST00000642021 IRS4O14654 1257 aaPredicted RBP15.93■□□□□ 0.14
PHGDH-233ENST00000642021 TTF1Q15361 905 aaPredicted RBP15.93■□□□□ 0.14
PHGDH-233ENST00000642021 KRBA2Q6ZNG9 492 aa15.93■□□□□ 0.14
PHGDH-233ENST00000642021 JMYQ8N9B5 988 aa15.93■□□□□ 0.14
PHGDH-233ENST00000642021 ZFP91Q96JP5 570 aaPredicted RBP15.93■□□□□ 0.14
PHGDH-233ENST00000642021 TMEM87BQ96K49 555 aa15.93■□□□□ 0.14
PHGDH-233ENST00000642021 INTS13Q9NVM9 706 aa15.93■□□□□ 0.14
PHGDH-233ENST00000642021 CDHR2Q9BYE9 1310 aa15.93■□□□□ 0.14
PHGDH-233ENST00000642021 TOB1P50616 345 aaPredicted RBP15.93■□□□□ 0.14
PHGDH-233ENST00000642021 CPLX2Q6PUV4 134 aaKnown RBP15.93■□□□□ 0.14
PHGDH-233ENST00000642021 SGMS1Q86VZ5 419 aa15.93■□□□□ 0.14
PHGDH-233ENST00000642021 STK11IPQ8N1F8 1099 aa15.93■□□□□ 0.14
PHGDH-233ENST00000642021 CNNM3Q8NE01 707 aa15.93■□□□□ 0.14
PHGDH-233ENST00000642021 AIDAQ96BJ3 306 aa15.93■□□□□ 0.14
PHGDH-233ENST00000642021 TMX1Q9H3N1 280 aa15.93■□□□□ 0.14
PHGDH-233ENST00000642021 STRCP1A6NGW2 1772 aa15.93■□□□□ 0.14
PHGDH-233ENST00000642021 PAPPAQ13219 1627 aa15.93■□□□□ 0.14
PHGDH-233ENST00000642021 TRIM65Q6PJ69 517 aa15.92■□□□□ 0.14
PHGDH-233ENST00000642021 RGS22Q8NE09 1264 aa15.92■□□□□ 0.14
PHGDH-233ENST00000642021 SLC4A9Q96Q91 983 aa15.92■□□□□ 0.14
PHGDH-233ENST00000642021 UTP14AQ9BVJ6 771 aaKnown RBP15.92■□□□□ 0.14
PHGDH-233ENST00000642021 FAM53CQ9NYF3 392 aa15.92■□□□□ 0.14
PHGDH-233ENST00000642021 ATRNO75882 1429 aa15.92■□□□□ 0.14
PHGDH-233ENST00000642021 ETF1P62495 437 aaKnown RBP15.92■□□□□ 0.14
PHGDH-233ENST00000642021 MDM2Q00987 491 aaPredicted RBP15.92■□□□□ 0.14
PHGDH-233ENST00000642021 HOMER1Q86YM7 354 aa15.92■□□□□ 0.14
PHGDH-233ENST00000642021 VSTM4Q8IW00 320 aa15.92■□□□□ 0.14
PHGDH-233ENST00000642021 IFNL3Q8IZI9 196 aa15.92■□□□□ 0.14
PHGDH-233ENST00000642021 CMTR1Q8N1G2 835 aaKnown RBP15.92■□□□□ 0.14
PHGDH-233ENST00000642021 CCDC82Q8N4S0 544 aa15.92■□□□□ 0.14
PHGDH-233ENST00000642021 TRMT112Q9UI30 125 aaKnown RBP15.92■□□□□ 0.14
PHGDH-233ENST00000642021 DNAI1Q9UI46 699 aa15.92■□□□□ 0.14
PHGDH-233ENST00000642021 KCNJ14Q9UNX9 436 aa15.92■□□□□ 0.14
PHGDH-233ENST00000642021 IFIT3O14879 490 aaKnown RBP15.92■□□□□ 0.14
PHGDH-233ENST00000642021 CUTAO60888 179 aa15.92■□□□□ 0.14
PHGDH-233ENST00000642021 ARID4AP29374 1257 aaPredicted RBP15.92■□□□□ 0.14
PHGDH-233ENST00000642021 ZKSCAN3Q9BRR0 538 aa15.92■□□□□ 0.14
PHGDH-233ENST00000642021 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.92■□□□□ 0.141e-6■□□□□ 10.9
PHGDH-233ENST00000642021 MYO5AQ9Y4I1 1855 aaKnown RBP15.91■□□□□ 0.14
PHGDH-233ENST00000642021 PRKAB2O43741 272 aa15.91■□□□□ 0.14
PHGDH-233ENST00000642021 STARD3NLO95772 234 aa15.91■□□□□ 0.14
PHGDH-233ENST00000642021 SLFN14P0C7P3 912 aa15.91■□□□□ 0.14
PHGDH-233ENST00000642021 REXO1L1PQ8IX06 675 aa15.91■□□□□ 0.14
PHGDH-233ENST00000642021 ARMT1Q9H993 441 aa15.91■□□□□ 0.14
PHGDH-233ENST00000642021 TBC1D2BQ9UPU7 963 aa15.91■□□□□ 0.14
PHGDH-233ENST00000642021 SLC12A7Q9Y666 1083 aa15.91■□□□□ 0.14
PHGDH-233ENST00000642021 PATL2C9JE40 543 aaKnown RBP15.91■□□□□ 0.14
PHGDH-233ENST00000642021 KIF20AO95235 890 aa15.91■□□□□ 0.14
PHGDH-233ENST00000642021 TRIM29Q14134 588 aa15.91■□□□□ 0.14
PHGDH-233ENST00000642021 MAGEB6Q8N7X4 407 aa15.91■□□□□ 0.14
PHGDH-233ENST00000642021 ST7Q9NRC1 585 aa15.91■□□□□ 0.14
PHGDH-233ENST00000642021 MBD4O95243 580 aa15.9■□□□□ 0.14
PHGDH-233ENST00000642021 H2AFXP16104 143 aaPredicted RBP15.9■□□□□ 0.14
PHGDH-233ENST00000642021 LIFRP42702 1097 aa15.9■□□□□ 0.14
PHGDH-233ENST00000642021 SSRP1Q08945 709 aaKnown RBP15.9■□□□□ 0.14
PHGDH-233ENST00000642021 TMEM139Q8IV31 216 aa15.9■□□□□ 0.14
PHGDH-233ENST00000642021 NOSTRINQ8IVI9 506 aa15.9■□□□□ 0.14
PHGDH-233ENST00000642021 PRR29P0C7W0 189 aa15.9■□□□□ 0.14
PHGDH-233ENST00000642021 EVA1CP58658 441 aa15.9■□□□□ 0.14
PHGDH-233ENST00000642021 FMR1Q06787 632 aaKnown RBP eCLIP15.9■□□□□ 0.143e-7■■■□□ 15
PHGDH-233ENST00000642021 ALX1Q15699 326 aa15.9■□□□□ 0.14
PHGDH-233ENST00000642021 OLFM4Q6UX06 510 aa15.9■□□□□ 0.14
PHGDH-233ENST00000642021 KRT222Q8N1A0 295 aa15.9■□□□□ 0.14
PHGDH-233ENST00000642021 KRI1Q8N9T8 703 aaKnown RBP15.9■□□□□ 0.14
PHGDH-233ENST00000642021 TEX13AQ9BXU3 409 aaPredicted RBP15.9■□□□□ 0.14
PHGDH-233ENST00000642021 MYH7P12883 1935 aa15.89■□□□□ 0.14
PHGDH-233ENST00000642021 GSG1L2A8MUP6 293 aa15.89■□□□□ 0.13
PHGDH-233ENST00000642021 NRDCO43847 1150 aa15.89■□□□□ 0.13
PHGDH-233ENST00000642021 FMNL1O95466 1100 aaPredicted RBP15.89■□□□□ 0.13
PHGDH-233ENST00000642021 TOP1P11387 765 aaKnown RBP15.89■□□□□ 0.13
PHGDH-233ENST00000642021 FGFR2P21802 821 aa15.89■□□□□ 0.13
PHGDH-233ENST00000642021 RASGRF1Q13972 1273 aa15.89■□□□□ 0.13
PHGDH-233ENST00000642021 ZNF827Q17R98 1081 aa15.89■□□□□ 0.13
PHGDH-233ENST00000642021 DIS3L2Q8IYB7 885 aaKnown RBP15.89■□□□□ 0.13
PHGDH-233ENST00000642021 GRAMD1CQ8IYS0 662 aa15.89■□□□□ 0.13
PHGDH-233ENST00000642021 SPATA5Q8NB90 893 aa15.89■□□□□ 0.13
PHGDH-233ENST00000642021 NAPBQ9H115 298 aa15.89■□□□□ 0.13
PHGDH-233ENST00000642021 ZBTB1Q9Y2K1 713 aa15.89■□□□□ 0.13
PHGDH-233ENST00000642021 CBFA2T2O43439 604 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms