RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 CYP2D7A0A087X1C5 515 aa10.41□□□□□ -0.74
PHGDH-219ENST00000641513 PPIP5K2O43314 1243 aa10.41□□□□□ -0.74
PHGDH-219ENST00000641513 DTNBO60941 627 aa10.41□□□□□ -0.74
PHGDH-219ENST00000641513 SLC3A2P08195 630 aaKnown RBP10.41□□□□□ -0.74
PHGDH-219ENST00000641513 XRCC6P12956 609 aaKnown RBP eCLIP10.41□□□□□ -0.745e-6■■□□□ 11.5
PHGDH-219ENST00000641513 PDIA4P13667 645 aaKnown RBP10.41□□□□□ -0.74
PHGDH-219ENST00000641513 GJB2P29033 226 aa10.41□□□□□ -0.74
PHGDH-219ENST00000641513 BTDP43251 543 aa10.41□□□□□ -0.74
PHGDH-219ENST00000641513 ZNF445P59923 1031 aa10.41□□□□□ -0.74
PHGDH-219ENST00000641513 AOC3Q16853 763 aa10.41□□□□□ -0.74
PHGDH-219ENST00000641513 SLC4A8Q2Y0W8 1093 aa10.41□□□□□ -0.74
PHGDH-219ENST00000641513 NFXL1Q6ZNB6 911 aa10.41□□□□□ -0.74
PHGDH-219ENST00000641513 AMOTL1Q8IY63 956 aa10.41□□□□□ -0.74
PHGDH-219ENST00000641513 RTKN2Q8IZC4 609 aa10.41□□□□□ -0.74
PHGDH-219ENST00000641513 MXD3Q9BW11 206 aa10.41□□□□□ -0.74
PHGDH-219ENST00000641513 GRPEL1Q9HAV7 217 aa10.41□□□□□ -0.74
PHGDH-219ENST00000641513 ATP8A2Q9NTI2 1148 aa10.41□□□□□ -0.74
PHGDH-219ENST00000641513 TTF2Q9UNY4 1162 aaKnown RBP10.41□□□□□ -0.74
PHGDH-219ENST00000641513 WDR19Q8NEZ3 1342 aa10.4□□□□□ -0.74
PHGDH-219ENST00000641513 KLF18A0A0U1RQI7 1052 aa10.4□□□□□ -0.74
PHGDH-219ENST00000641513 USP17L12C9JPN9 530 aa10.4□□□□□ -0.74
PHGDH-219ENST00000641513 USP17L21D6R901 530 aa10.4□□□□□ -0.74
PHGDH-219ENST00000641513 KDM4AO75164 1064 aa10.4□□□□□ -0.74
PHGDH-219ENST00000641513 PLCG2P16885 1265 aa10.4□□□□□ -0.74
PHGDH-219ENST00000641513 CCT2P78371 535 aaKnown RBP10.4□□□□□ -0.74
PHGDH-219ENST00000641513 PKP1Q13835 747 aa10.4□□□□□ -0.74
PHGDH-219ENST00000641513 GRIPAP1Q4V328 841 aa10.4□□□□□ -0.74
PHGDH-219ENST00000641513 GIMAP6Q6P9H5 292 aa10.4□□□□□ -0.74
PHGDH-219ENST00000641513 CTR9Q6PD62 1173 aa10.4□□□□□ -0.74
PHGDH-219ENST00000641513 CYB5R4Q7L1T6 521 aa10.4□□□□□ -0.74
PHGDH-219ENST00000641513 PODNQ7Z5L7 613 aa10.4□□□□□ -0.74
PHGDH-219ENST00000641513 TEX11Q8IYF3 940 aa10.4□□□□□ -0.74
PHGDH-219ENST00000641513 TGFBRAP1Q8WUH2 860 aa10.4□□□□□ -0.74
PHGDH-219ENST00000641513 STAG1Q8WVM7 1258 aa10.4□□□□□ -0.74
PHGDH-219ENST00000641513 GTF3C6Q969F1 213 aa10.4□□□□□ -0.74
PHGDH-219ENST00000641513 RTFDC1Q9BY42 306 aaPredicted RBP10.4□□□□□ -0.74
PHGDH-219ENST00000641513 DCP1AQ9NPI6 582 aaPredicted RBP10.4□□□□□ -0.74
PHGDH-219ENST00000641513 GPHNQ9NQX3 736 aaPredicted RBP10.4□□□□□ -0.74
PHGDH-219ENST00000641513 MCM9Q9NXL9 1143 aa10.4□□□□□ -0.74
PHGDH-219ENST00000641513 PIM2Q9P1W9 311 aa10.4□□□□□ -0.74
PHGDH-219ENST00000641513 DDX60LQ5H9U9 1706 aaKnown RBP10.39□□□□□ -0.75
PHGDH-219ENST00000641513 ERICH2A1L162 156 aa10.39□□□□□ -0.75
PHGDH-219ENST00000641513 GOLGA8BA8MQT2 603 aa10.39□□□□□ -0.75
PHGDH-219ENST00000641513 IFIT3O14879 490 aaKnown RBP10.39□□□□□ -0.75
PHGDH-219ENST00000641513 RANBP6O60518 1105 aaKnown RBP10.39□□□□□ -0.75
PHGDH-219ENST00000641513 PFKFB2O60825 505 aa10.39□□□□□ -0.75
PHGDH-219ENST00000641513 MBD3O95983 291 aa10.39□□□□□ -0.75
PHGDH-219ENST00000641513 POLR3DP05423 398 aaPredicted RBP10.39□□□□□ -0.75
PHGDH-219ENST00000641513 USP17L8P0C7I0 530 aa10.39□□□□□ -0.75
PHGDH-219ENST00000641513 SCNN1DP51172 638 aa10.39□□□□□ -0.75
PHGDH-219ENST00000641513 ANTXR2P58335 489 aa10.39□□□□□ -0.75
PHGDH-219ENST00000641513 PPP4CP60510 307 aa10.39□□□□□ -0.75
PHGDH-219ENST00000641513 TGFB2P61812 414 aa10.39□□□□□ -0.75
PHGDH-219ENST00000641513 ST3GAL1Q11201 340 aa10.39□□□□□ -0.75
PHGDH-219ENST00000641513 SART3Q15020 963 aaKnown RBP10.39□□□□□ -0.75
PHGDH-219ENST00000641513 TMEM67Q5HYA8 995 aa10.39□□□□□ -0.75
PHGDH-219ENST00000641513 RAB11FIP4Q86YS3 637 aa10.39□□□□□ -0.75
PHGDH-219ENST00000641513 CERS3Q8IU89 383 aa10.39□□□□□ -0.75
PHGDH-219ENST00000641513 MAPKAPK5Q8IW41 473 aa10.39□□□□□ -0.75
PHGDH-219ENST00000641513 C7orf43Q8WVR3 580 aa10.39□□□□□ -0.75
PHGDH-219ENST00000641513 ZKSCAN3Q9BRR0 538 aa10.39□□□□□ -0.75
PHGDH-219ENST00000641513 KCNQ5Q9NR82 932 aa10.39□□□□□ -0.75
PHGDH-219ENST00000641513 ARPP21Q9UBL0 812 aaPredicted RBP10.39□□□□□ -0.75
PHGDH-219ENST00000641513 SAP30BPQ9UHR5 308 aaKnown RBP10.39□□□□□ -0.75
PHGDH-219ENST00000641513 SUGT1Q9Y2Z0 365 aa10.39□□□□□ -0.75
PHGDH-219ENST00000641513 ARFGEF1Q9Y6D6 1849 aa10.39□□□□□ -0.75
PHGDH-219ENST00000641513 WDR33Q9C0J8 1336 aaKnown RBP10.38□□□□□ -0.75
PHGDH-219ENST00000641513 GPR75-ASB3A0A0A6YYF3 556 aa10.38□□□□□ -0.75
PHGDH-219ENST00000641513 VPS37CA5D8V6 355 aaPredicted RBP10.38□□□□□ -0.75
PHGDH-219ENST00000641513 USP17L3A6NCW0 530 aa10.38□□□□□ -0.75
PHGDH-219ENST00000641513 USP17L4A6NCW7 530 aa10.38□□□□□ -0.75
PHGDH-219ENST00000641513 CCDC69A6NI79 296 aa10.38□□□□□ -0.75
PHGDH-219ENST00000641513 SH2B2O14492 632 aaPredicted RBP10.38□□□□□ -0.75
PHGDH-219ENST00000641513 BRD1O95696 1058 aa10.38□□□□□ -0.75
PHGDH-219ENST00000641513 CYP2D6P10635 497 aa10.38□□□□□ -0.75
PHGDH-219ENST00000641513 KCNA3P22001 575 aa10.38□□□□□ -0.75
PHGDH-219ENST00000641513 RBM5P52756 815 aaKnown RBP eCLIP10.38□□□□□ -0.75
PHGDH-219ENST00000641513 KIAA2012Q0VF49 1180 aa10.38□□□□□ -0.75
PHGDH-219ENST00000641513 SCRN1Q12765 414 aa10.38□□□□□ -0.75
PHGDH-219ENST00000641513 DALRD3Q5D0E6 543 aaKnown RBP10.38□□□□□ -0.75
PHGDH-219ENST00000641513 SOGA3Q5TF21 947 aa10.38□□□□□ -0.75
PHGDH-219ENST00000641513 SYNE3Q6ZMZ3 975 aa10.38□□□□□ -0.75
PHGDH-219ENST00000641513 USP17L1Q7RTZ2 530 aa10.38□□□□□ -0.75
PHGDH-219ENST00000641513 LARGE2Q8N3Y3 721 aa10.38□□□□□ -0.75
PHGDH-219ENST00000641513 CERS5Q8N5B7 392 aa10.38□□□□□ -0.75
PHGDH-219ENST00000641513 FAM184AQ8NB25 1140 aa10.38□□□□□ -0.75
PHGDH-219ENST00000641513 ESR2Q92731 530 aa10.38□□□□□ -0.75
PHGDH-219ENST00000641513 TEKT1Q969V4 418 aa10.38□□□□□ -0.75
PHGDH-219ENST00000641513 CHMP4CQ96CF2 233 aa10.38□□□□□ -0.75
PHGDH-219ENST00000641513 DDX11Q96FC9 970 aa10.38□□□□□ -0.75
PHGDH-219ENST00000641513 ZNF274Q96GC6 653 aaPredicted RBP10.38□□□□□ -0.75
PHGDH-219ENST00000641513 TMEM87BQ96K49 555 aa10.38□□□□□ -0.75
PHGDH-219ENST00000641513 UBAC1Q9BSL1 405 aa10.38□□□□□ -0.75
PHGDH-219ENST00000641513 AGXT2Q9BYV1 514 aa10.38□□□□□ -0.75
PHGDH-219ENST00000641513 LMBRD1Q9NUN5 540 aa10.38□□□□□ -0.75
PHGDH-219ENST00000641513 ZSWIM5Q9P217 1185 aa10.38□□□□□ -0.75
PHGDH-219ENST00000641513 ANAPC4Q9UJX5 808 aa10.38□□□□□ -0.75
PHGDH-219ENST00000641513 ANGEL1Q9UNK9 670 aaKnown RBP10.38□□□□□ -0.75
PHGDH-219ENST00000641513 DAGLAQ9Y4D2 1042 aa10.38□□□□□ -0.75
PHGDH-219ENST00000641513 TACC3Q9Y6A5 838 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms