RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 SCYL3Q8IZE3 742 aa9.92□□□□□ -0.82
PHGDH-217ENST00000641455 SYMPKQ92797 1274 aaKnown RBP9.92□□□□□ -0.82
PHGDH-217ENST00000641455 CDX2Q99626 313 aaPredicted RBP9.92□□□□□ -0.82
PHGDH-217ENST00000641455 PNMA3Q9UL41 463 aa9.92□□□□□ -0.82
PHGDH-217ENST00000641455 SLC45A1Q9Y2W3 748 aa9.92□□□□□ -0.82
PHGDH-217ENST00000641455 TRIM75PA6NK02 468 aa9.91□□□□□ -0.82
PHGDH-217ENST00000641455 PTPRAP18433 802 aa9.91□□□□□ -0.82
PHGDH-217ENST00000641455 NFIAQ12857 509 aa9.91□□□□□ -0.82
PHGDH-217ENST00000641455 FAM110CQ1W6H9 321 aa9.91□□□□□ -0.82
PHGDH-217ENST00000641455 FBXO33Q7Z6M2 555 aa9.91□□□□□ -0.82
PHGDH-217ENST00000641455 ZSCAN29Q8IWY8 852 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-217ENST00000641455 MRIQ9BWK5 157 aa9.91□□□□□ -0.82
PHGDH-217ENST00000641455 PUS3Q9BZE2 481 aaKnown RBP9.91□□□□□ -0.82
PHGDH-217ENST00000641455 RAPGEFL1Q9UHV5 662 aa9.91□□□□□ -0.82
PHGDH-217ENST00000641455 OGDHLQ9ULD0 1010 aa9.91□□□□□ -0.82
PHGDH-217ENST00000641455 LRRFIP2Q9Y608 721 aaKnown RBP9.91□□□□□ -0.82
PHGDH-217ENST00000641455 PTPRFP10586 1907 aa9.9□□□□□ -0.82
PHGDH-217ENST00000641455 MROH5Q6ZUA9 1318 aa9.9□□□□□ -0.82
PHGDH-217ENST00000641455 PRKAR2AP13861 404 aaKnown RBP9.9□□□□□ -0.82
PHGDH-217ENST00000641455 CYP2B6P20813 491 aa9.9□□□□□ -0.82
PHGDH-217ENST00000641455 LRRC26Q2I0M4 334 aa9.9□□□□□ -0.82
PHGDH-217ENST00000641455 METTL24Q5JXM2 366 aa9.9□□□□□ -0.82
PHGDH-217ENST00000641455 CDC42EP5Q6NZY7 148 aa9.9□□□□□ -0.82
PHGDH-217ENST00000641455 MYLIPQ8WY64 445 aa9.9□□□□□ -0.82
PHGDH-217ENST00000641455 SPINK5Q9NQ38 1064 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-217ENST00000641455 C9orf78Q9NZ63 289 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-217ENST00000641455 AGTPBP1Q9UPW5 1226 aa9.9□□□□□ -0.82
PHGDH-217ENST00000641455 SUGT1Q9Y2Z0 365 aa9.9□□□□□ -0.82
PHGDH-217ENST00000641455 DAGLAQ9Y4D2 1042 aa9.9□□□□□ -0.82
PHGDH-217ENST00000641455 AFG3L2Q9Y4W6 797 aa9.9□□□□□ -0.82
PHGDH-217ENST00000641455 DOCK2Q92608 1830 aa9.9□□□□□ -0.82
PHGDH-217ENST00000641455 F6X3S4 739 aa9.89□□□□□ -0.83
PHGDH-217ENST00000641455 GRM8O00222 908 aa9.89□□□□□ -0.83
PHGDH-217ENST00000641455 FOSL2P15408 326 aa9.89□□□□□ -0.83
PHGDH-217ENST00000641455 DIXDC1Q155Q3 683 aa9.89□□□□□ -0.83
PHGDH-217ENST00000641455 TREML2Q5T2D2 321 aa9.89□□□□□ -0.83
PHGDH-217ENST00000641455 CCDC84Q86UT8 332 aaPredicted RBP9.89□□□□□ -0.83
PHGDH-217ENST00000641455 TRIB2Q92519 343 aa9.89□□□□□ -0.83
PHGDH-217ENST00000641455 USP40Q9NVE5 1235 aa9.89□□□□□ -0.83
PHGDH-217ENST00000641455 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.89□□□□□ -0.83
PHGDH-217ENST00000641455 PRKAG2Q9UGJ0 569 aa9.89□□□□□ -0.83
PHGDH-217ENST00000641455 MYH13Q9UKX3 1938 aa9.89□□□□□ -0.83
PHGDH-217ENST00000641455 DOCK1Q14185 1865 aa9.89□□□□□ -0.83
PHGDH-217ENST00000641455 COL2A1P02458 1487 aaPredicted RBP9.88□□□□□ -0.83
PHGDH-217ENST00000641455 TMEM265A0A087WTH1 108 aa9.88□□□□□ -0.83
PHGDH-217ENST00000641455 TNFRSF10AO00220 468 aa9.88□□□□□ -0.83
PHGDH-217ENST00000641455 ZFPM1Q8IX07 1006 aa9.88□□□□□ -0.83
PHGDH-217ENST00000641455 FAM122AQ96E09 287 aa9.88□□□□□ -0.83
PHGDH-217ENST00000641455 SEMA6BQ9H3T3 888 aa9.88□□□□□ -0.83
PHGDH-217ENST00000641455 FAM198AQ9UFP1 575 aa9.88□□□□□ -0.83
PHGDH-217ENST00000641455 TTC28Q96AY4 2481 aa9.88□□□□□ -0.83
PHGDH-217ENST00000641455 PHF20L1A8MW92 1017 aa9.87□□□□□ -0.83
PHGDH-217ENST00000641455 IFIT1P09914 478 aaKnown RBP9.87□□□□□ -0.83
PHGDH-217ENST00000641455 COL6A1P12109 1028 aa9.87□□□□□ -0.83
PHGDH-217ENST00000641455 ZKSCAN1P17029 563 aaPredicted RBP9.87□□□□□ -0.83
PHGDH-217ENST00000641455 GCLCP48506 637 aaPredicted RBP9.87□□□□□ -0.83
PHGDH-217ENST00000641455 RGS3P49796 1198 aa9.87□□□□□ -0.83
PHGDH-217ENST00000641455 PABPC4Q13310 644 aaKnown RBP eCLIP9.87□□□□□ -0.83
PHGDH-217ENST00000641455 BEND3Q5T5X7 828 aa9.87□□□□□ -0.83
PHGDH-217ENST00000641455 WDR66Q8TBY9 1149 aa9.87□□□□□ -0.83
PHGDH-217ENST00000641455 SENP6Q9GZR1 1112 aaPredicted RBP9.87□□□□□ -0.83
PHGDH-217ENST00000641455 GJD2Q9UKL4 321 aa9.87□□□□□ -0.83
PHGDH-217ENST00000641455 CTNND1O60716 968 aaKnown RBP9.86□□□□□ -0.83
PHGDH-217ENST00000641455 CCND3P30281 292 aaPredicted RBP9.86□□□□□ -0.83
PHGDH-217ENST00000641455 PLA2G5P39877 138 aa9.86□□□□□ -0.83
PHGDH-217ENST00000641455 ATN1P54259 1190 aaPredicted RBP9.86□□□□□ -0.83
PHGDH-217ENST00000641455 PDE3AQ14432 1141 aa9.86□□□□□ -0.83
PHGDH-217ENST00000641455 LRRC24Q50LG9 513 aa9.86□□□□□ -0.83
PHGDH-217ENST00000641455 TJAP1Q5JTD0 557 aa9.86□□□□□ -0.83
PHGDH-217ENST00000641455 CCAR1Q8IX12 1150 aaKnown RBP9.86□□□□□ -0.83
PHGDH-217ENST00000641455 NUDT12Q9BQG2 462 aa9.86□□□□□ -0.83
PHGDH-217ENST00000641455 CACNA1FO60840 1977 aa9.86□□□□□ -0.83
PHGDH-217ENST00000641455 PHIPQ8WWQ0 1821 aa9.86□□□□□ -0.83
PHGDH-217ENST00000641455 ATRNL1Q5VV63 1379 aa9.86□□□□□ -0.83
PHGDH-217ENST00000641455 PDE8BO95263 885 aa9.85□□□□□ -0.83
PHGDH-217ENST00000641455 LDHBP07195 334 aaKnown RBP9.85□□□□□ -0.83
PHGDH-217ENST00000641455 SLURP2P0DP57 97 aa9.85□□□□□ -0.83
PHGDH-217ENST00000641455 PRDX5P30044 214 aa9.85□□□□□ -0.83
PHGDH-217ENST00000641455 HMGCS2P54868 508 aa9.85□□□□□ -0.83
PHGDH-217ENST00000641455 IRX3P78415 501 aaPredicted RBP9.85□□□□□ -0.83
PHGDH-217ENST00000641455 CACNB2Q08289 660 aaPredicted RBP9.85□□□□□ -0.83
PHGDH-217ENST00000641455 SPP2Q13103 211 aa9.85□□□□□ -0.83
PHGDH-217ENST00000641455 PICALMQ13492 652 aa9.85□□□□□ -0.83
PHGDH-217ENST00000641455 SHHQ15465 462 aa9.85□□□□□ -0.83
PHGDH-217ENST00000641455 MAP3K21Q5TCX8 1036 aa9.85□□□□□ -0.83
PHGDH-217ENST00000641455 SLC4A10Q6U841 1118 aa9.85□□□□□ -0.83
PHGDH-217ENST00000641455 PROCA1Q8NCQ7 364 aaPredicted RBP9.85□□□□□ -0.83
PHGDH-217ENST00000641455 SOCS4Q8WXH5 440 aa9.85□□□□□ -0.83
PHGDH-217ENST00000641455 SUCLG2Q96I99 432 aa9.85□□□□□ -0.83
PHGDH-217ENST00000641455 ASCC2Q9H1I8 757 aaPredicted RBP9.85□□□□□ -0.83
PHGDH-217ENST00000641455 CWC22Q9HCG8 908 aaKnown RBP9.85□□□□□ -0.83
PHGDH-217ENST00000641455 PRDM5Q9NQX1 630 aaPredicted RBP9.85□□□□□ -0.83
PHGDH-217ENST00000641455 VCANP13611 3396 aa9.85□□□□□ -0.83
PHGDH-217ENST00000641455 PLXNB2O15031 1838 aa9.84□□□□□ -0.83
PHGDH-217ENST00000641455 MAST2Q6P0Q8 1798 aa9.84□□□□□ -0.83
PHGDH-217ENST00000641455 ENTPD3O75355 529 aa9.84□□□□□ -0.83
PHGDH-217ENST00000641455 SLC5A1P13866 664 aa9.84□□□□□ -0.83
PHGDH-217ENST00000641455 PUM3Q15397 648 aaKnown RBP9.84□□□□□ -0.83
PHGDH-217ENST00000641455 C9orf50Q5SZB4 431 aa9.84□□□□□ -0.83
PHGDH-217ENST00000641455 TRMT44Q8IYL2 757 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms