RNA–Protein interactions for RNA: ENST00000641261.1

LINC02228-202, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-202ENST00000641261 CCDC39Q9UFE4 941 aa15.58■□□□□ 0.09
LINC02228-202ENST00000641261 PCDHA7Q9UN72 937 aa15.58■□□□□ 0.09
LINC02228-202ENST00000641261 ZKSCAN5Q9Y2L8 839 aa15.58■□□□□ 0.09
LINC02228-202ENST00000641261 CYP2D7A0A087X1C5 515 aa15.58■□□□□ 0.08
LINC02228-202ENST00000641261 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.58■□□□□ 0.08
LINC02228-202ENST00000641261 RFC4P35249 363 aa15.58■□□□□ 0.08
LINC02228-202ENST00000641261 LUZP1Q86V48 1076 aa15.58■□□□□ 0.08
LINC02228-202ENST00000641261 JAG2Q9Y219 1238 aa15.58■□□□□ 0.08
LINC02228-202ENST00000641261 CCDC88AQ3V6T2 1871 aa15.58■□□□□ 0.08
LINC02228-202ENST00000641261 DUOX1Q9NRD9 1551 aa15.58■□□□□ 0.08
LINC02228-202ENST00000641261 UBR3Q6ZT12 1888 aa15.57■□□□□ 0.08
LINC02228-202ENST00000641261 CCDC69A6NI79 296 aa15.57■□□□□ 0.08
LINC02228-202ENST00000641261 NPHP1O15259 732 aa15.57■□□□□ 0.08
LINC02228-202ENST00000641261 CDKL5O76039 1030 aa15.57■□□□□ 0.08
LINC02228-202ENST00000641261 ENGASEQ8NFI3 743 aa15.57■□□□□ 0.08
LINC02228-202ENST00000641261 MYH6P13533 1939 aa15.57■□□□□ 0.08
LINC02228-202ENST00000641261 PTMAP06454 111 aaKnown RBP15.57■□□□□ 0.08
LINC02228-202ENST00000641261 PRDX5P30044 214 aa15.57■□□□□ 0.08
LINC02228-202ENST00000641261 EVX2Q03828 476 aa15.57■□□□□ 0.08
LINC02228-202ENST00000641261 NFIXQ14938 502 aa15.57■□□□□ 0.08
LINC02228-202ENST00000641261 KRT40Q6A162 431 aa15.57■□□□□ 0.08
LINC02228-202ENST00000641261 BRAPQ7Z569 592 aa15.57■□□□□ 0.08
LINC02228-202ENST00000641261 FSIP1Q8NA03 581 aa15.57■□□□□ 0.08
LINC02228-202ENST00000641261 NSUN4Q96CB9 384 aaKnown RBP15.57■□□□□ 0.08
LINC02228-202ENST00000641261 POLR3EQ9NVU0 708 aa15.57■□□□□ 0.08
LINC02228-202ENST00000641261 HIBADHP31937 336 aaKnown RBP15.56■□□□□ 0.08
LINC02228-202ENST00000641261 IARSP41252 1262 aaKnown RBP15.56■□□□□ 0.08
LINC02228-202ENST00000641261 TRAPPC3LQ5T215 181 aa15.56■□□□□ 0.08
LINC02228-202ENST00000641261 CPLX2Q6PUV4 134 aaKnown RBP15.56■□□□□ 0.08
LINC02228-202ENST00000641261 GOLGB1Q14789 3259 aaKnown RBP15.56■□□□□ 0.08
LINC02228-202ENST00000641261 MECOMQ03112 1051 aa15.56■□□□□ 0.08
LINC02228-202ENST00000641261 CHAF1AQ13111 956 aaPredicted RBP15.56■□□□□ 0.08
LINC02228-202ENST00000641261 WTAPQ15007 396 aa15.56■□□□□ 0.08
LINC02228-202ENST00000641261 CCDC73Q6ZRK6 1079 aa15.56■□□□□ 0.08
LINC02228-202ENST00000641261 SEPT12Q8IYM1 358 aa15.56■□□□□ 0.08
LINC02228-202ENST00000641261 SLC26A6Q9BXS9 759 aa15.56■□□□□ 0.08
LINC02228-202ENST00000641261 CBX8Q9HC52 389 aa15.56■□□□□ 0.08
LINC02228-202ENST00000641261 MAST2Q6P0Q8 1798 aa15.56■□□□□ 0.08
LINC02228-202ENST00000641261 IRS2Q9Y4H2 1338 aa15.56■□□□□ 0.08
LINC02228-202ENST00000641261 NID2Q14112 1375 aa15.55■□□□□ 0.08
LINC02228-202ENST00000641261 GUCY1A2P33402 732 aa15.55■□□□□ 0.08
LINC02228-202ENST00000641261 FAM160A1Q05DH4 1040 aa15.55■□□□□ 0.08
LINC02228-202ENST00000641261 STK38Q15208 465 aa15.55■□□□□ 0.08
LINC02228-202ENST00000641261 CMTR1Q8N1G2 835 aaKnown RBP15.55■□□□□ 0.08
LINC02228-202ENST00000641261 ANKRD2Q9GZV1 360 aa15.55■□□□□ 0.08
LINC02228-202ENST00000641261 DNAJC25Q9H1X3 360 aa15.55■□□□□ 0.08
LINC02228-202ENST00000641261 RNF41Q9H4P4 317 aaPredicted RBP15.55■□□□□ 0.08
LINC02228-202ENST00000641261 LAMB1P07942 1786 aa15.55■□□□□ 0.08
LINC02228-202ENST00000641261 A0A087WWV3 80 aa15.55■□□□□ 0.08
LINC02228-202ENST00000641261 A0A1B0GVL5 298 aa15.55■□□□□ 0.08
LINC02228-202ENST00000641261 SEMA3EO15041 775 aa15.55■□□□□ 0.08
LINC02228-202ENST00000641261 ADALQ6DHV7 355 aa15.55■□□□□ 0.08
LINC02228-202ENST00000641261 SASS6Q6UVJ0 657 aa15.55■□□□□ 0.08
LINC02228-202ENST00000641261 ERCC4Q92889 916 aaPredicted RBP15.55■□□□□ 0.08
LINC02228-202ENST00000641261 AATFQ9NY61 560 aaKnown RBP eCLIP15.55■□□□□ 0.08
LINC02228-202ENST00000641261 ANAPC4Q9UJX5 808 aa15.55■□□□□ 0.08
LINC02228-202ENST00000641261 ONECUT3O60422 494 aaPredicted RBP15.54■□□□□ 0.08
LINC02228-202ENST00000641261 PRDM1O75626 825 aa15.54■□□□□ 0.08
LINC02228-202ENST00000641261 YEATS4O95619 227 aa15.54■□□□□ 0.08
LINC02228-202ENST00000641261 HSPA1LP34931 641 aa15.54■□□□□ 0.08
LINC02228-202ENST00000641261 SART3Q15020 963 aaKnown RBP15.54■□□□□ 0.08
LINC02228-202ENST00000641261 CCDC82Q8N4S0 544 aa15.54■□□□□ 0.08
LINC02228-202ENST00000641261 MRPS27Q92552 414 aaKnown RBP15.54■□□□□ 0.08
LINC02228-202ENST00000641261 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.54■□□□□ 0.08
LINC02228-202ENST00000641261 TNKSO95271 1327 aa15.54■□□□□ 0.08
LINC02228-202ENST00000641261 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.54■□□□□ 0.08
LINC02228-202ENST00000641261 SPTLC2O15270 562 aa15.54■□□□□ 0.08
LINC02228-202ENST00000641261 IFNAR1P17181 557 aa15.54■□□□□ 0.08
LINC02228-202ENST00000641261 FMR1NBQ8N0W7 255 aaPredicted RBP15.54■□□□□ 0.08
LINC02228-202ENST00000641261 KCNG4Q8TDN1 519 aa15.54■□□□□ 0.08
LINC02228-202ENST00000641261 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.54■□□□□ 0.08
LINC02228-202ENST00000641261 ERICH2A1L162 156 aa15.53■□□□□ 0.08
LINC02228-202ENST00000641261 KINO60870 393 aaKnown RBP15.53■□□□□ 0.08
LINC02228-202ENST00000641261 NDUFA8P51970 172 aa15.53■□□□□ 0.08
LINC02228-202ENST00000641261 SEC23AQ15436 765 aa15.53■□□□□ 0.08
LINC02228-202ENST00000641261 SF3A1Q15459 793 aaKnown RBP15.53■□□□□ 0.08
LINC02228-202ENST00000641261 RTN1Q16799 776 aa15.53■□□□□ 0.08
LINC02228-202ENST00000641261 ANO1Q5XXA6 986 aa15.53■□□□□ 0.08
LINC02228-202ENST00000641261 SYNE3Q6ZMZ3 975 aa15.53■□□□□ 0.08
LINC02228-202ENST00000641261 CNBD1Q8NA66 436 aa15.53■□□□□ 0.08
LINC02228-202ENST00000641261 ZNF830Q96NB3 372 aaPredicted RBP15.53■□□□□ 0.08
LINC02228-202ENST00000641261 UBAC1Q9BSL1 405 aa15.53■□□□□ 0.08
LINC02228-202ENST00000641261 BRIP1Q9BX63 1249 aa15.53■□□□□ 0.08
LINC02228-202ENST00000641261 STK36Q9NRP7 1315 aa15.53■□□□□ 0.08
LINC02228-202ENST00000641261 KIAA1551Q9HCM1 1747 aa15.53■□□□□ 0.08
LINC02228-202ENST00000641261 FMNL1O95466 1100 aaPredicted RBP15.53■□□□□ 0.08
LINC02228-202ENST00000641261 ZNF165P49910 485 aa15.53■□□□□ 0.08
LINC02228-202ENST00000641261 CTR9Q6PD62 1173 aa15.53■□□□□ 0.08
LINC02228-202ENST00000641261 ZNF654Q8IZM8 581 aa15.53■□□□□ 0.08
LINC02228-202ENST00000641261 NUP133Q8WUM0 1156 aa15.53■□□□□ 0.08
LINC02228-202ENST00000641261 ESR2Q92731 530 aa15.53■□□□□ 0.08
LINC02228-202ENST00000641261 MROH7-TTC4A0A0A0MT08 1334 aa15.53■□□□□ 0.08
LINC02228-202ENST00000641261 PDS5AQ29RF7 1337 aaKnown RBP15.53■□□□□ 0.08
LINC02228-202ENST00000641261 ZNF500O60304 480 aaPredicted RBP15.52■□□□□ 0.08
LINC02228-202ENST00000641261 SSRP1Q08945 709 aaKnown RBP15.52■□□□□ 0.08
LINC02228-202ENST00000641261 C11orf57Q6ZUT1 292 aaPredicted RBP15.52■□□□□ 0.08
LINC02228-202ENST00000641261 NBPF11Q86T75 865 aa15.52■□□□□ 0.08
LINC02228-202ENST00000641261 DLEC1Q9Y238 1755 aa15.52■□□□□ 0.07
LINC02228-202ENST00000641261 A0A1W2PQ27 194 aa15.52■□□□□ 0.07
LINC02228-202ENST00000641261 A0A1W2PQ64 194 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms