RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, human

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GFAP-238	ENST00000640859	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.2	□□□□□ -0.3
GFAP-238	ENST00000640859	IGDCC4	Q8TDY8	1250 aa		13.2	□□□□□ -0.3
GFAP-238	ENST00000640859	TMEM87B	Q96K49	555 aa		13.2	□□□□□ -0.3
GFAP-238	ENST00000640859	RBSN	Q9H1K0	784 aa		13.2	□□□□□ -0.3
GFAP-238	ENST00000640859	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.2	□□□□□ -0.3
GFAP-238	ENST00000640859	ABCF2	Q9UG63	623 aa		13.2	□□□□□ -0.3
GFAP-238	ENST00000640859	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.2	□□□□□ -0.3
GFAP-238	ENST00000640859	ANGEL1	Q9UNK9	670 aa	Known RBP	13.2	□□□□□ -0.3
GFAP-238	ENST00000640859	MAGEB6P1	A0A0J9YX57	407 aa		13.19	□□□□□ -0.3
GFAP-238	ENST00000640859	SYCE3	A1L190	88 aa		13.19	□□□□□ -0.3
GFAP-238	ENST00000640859	KLRG2	A4D1S0	409 aa	Predicted RBP	13.19	□□□□□ -0.3
GFAP-238	ENST00000640859	GOLGA8B	A8MQT2	603 aa		13.19	□□□□□ -0.3
GFAP-238	ENST00000640859	CCDC183	Q5T5S1	534 aa		13.19	□□□□□ -0.3
GFAP-238	ENST00000640859	TMC4	Q7Z404	712 aa		13.19	□□□□□ -0.3
GFAP-238	ENST00000640859	MIGA1	Q8NAN2	632 aa		13.19	□□□□□ -0.3
GFAP-238	ENST00000640859	ZNF384	Q8TF68	577 aa		13.19	□□□□□ -0.3
GFAP-238	ENST00000640859	STAG1	Q8WVM7	1258 aa		13.19	□□□□□ -0.3
GFAP-238	ENST00000640859	RIOK1	Q9BRS2	568 aa	Known RBP	13.19	□□□□□ -0.3
GFAP-238	ENST00000640859	CNNM2	Q9H8M5	875 aa		13.19	□□□□□ -0.3
GFAP-238	ENST00000640859	INCENP	Q9NQS7	918 aa		13.19	□□□□□ -0.3
GFAP-238	ENST00000640859	LEMD3	Q9Y2U8	911 aa		13.19	□□□□□ -0.3
GFAP-238	ENST00000640859	DHX16	O60231	1041 aa	Known RBP	13.18	□□□□□ -0.3
GFAP-238	ENST00000640859	ADD1	P35611	737 aa	Known RBP	13.18	□□□□□ -0.3
GFAP-238	ENST00000640859	TDO2	P48775	406 aa		13.18	□□□□□ -0.3
GFAP-238	ENST00000640859	CRY2	Q49AN0	593 aa		13.18	□□□□□ -0.3
GFAP-238	ENST00000640859	GRIPAP1	Q4V328	841 aa		13.18	□□□□□ -0.3
GFAP-238	ENST00000640859	C15orf52	Q6ZUT6	534 aa	Known RBP	13.18	□□□□□ -0.3
GFAP-238	ENST00000640859	TXNRD3	Q86VQ6	643 aa		13.18	□□□□□ -0.3
GFAP-238	ENST00000640859	RGS22	Q8NE09	1264 aa		13.18	□□□□□ -0.3
GFAP-238	ENST00000640859	LEO1	Q8WVC0	666 aa	Predicted RBP	13.18	□□□□□ -0.3
GFAP-238	ENST00000640859	CRAMP1	Q96RY5	1269 aa		13.18	□□□□□ -0.3
GFAP-238	ENST00000640859	MTA3	Q9BTC8	594 aa		13.18	□□□□□ -0.3
GFAP-238	ENST00000640859	KRT23	Q9C075	422 aa		13.18	□□□□□ -0.3
GFAP-238	ENST00000640859	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.18	□□□□□ -0.3
GFAP-238	ENST00000640859	RTN4	Q9NQC3	1192 aa	Known RBP	13.18	□□□□□ -0.3
GFAP-238	ENST00000640859	TFIP11	Q9UBB9	837 aa	Known RBP	13.18	□□□□□ -0.3
GFAP-238	ENST00000640859	ANAPC4	Q9UJX5	808 aa		13.18	□□□□□ -0.3
GFAP-238	ENST00000640859	MAST2	Q6P0Q8	1798 aa		13.17	□□□□□ -0.3
GFAP-238	ENST00000640859	CCDC88A	Q3V6T2	1871 aa		13.17	□□□□□ -0.3
GFAP-238	ENST00000640859	NRXN2	Q9P2S2	1712 aa		13.17	□□□□□ -0.3
GFAP-238	ENST00000640859	PITPNM1	O00562	1244 aa		13.17	□□□□□ -0.3
GFAP-238	ENST00000640859	IGSF3	O75054	1194 aa		13.17	□□□□□ -0.3
GFAP-238	ENST00000640859	BBOX1	O75936	387 aa		13.17	□□□□□ -0.3
GFAP-238	ENST00000640859	LETM1	O95202	739 aa	Predicted RBP	13.17	□□□□□ -0.3
GFAP-238	ENST00000640859	LIFR	P42702	1097 aa		13.17	□□□□□ -0.3
GFAP-238	ENST00000640859	DYNLL1	P63167	89 aa	Known RBP	13.17	□□□□□ -0.3
GFAP-238	ENST00000640859	CC2D2B	Q6DHV5	1058 aa		13.17	□□□□□ -0.3
GFAP-238	ENST00000640859	TMED8	Q6PL24	325 aa	Predicted RBP	13.17	□□□□□ -0.3
GFAP-238	ENST00000640859	MFSD6	Q6ZSS7	791 aa		13.17	□□□□□ -0.3
GFAP-238	ENST00000640859	SGMS1	Q86VZ5	419 aa		13.17	□□□□□ -0.3
GFAP-238	ENST00000640859	NSUN4	Q96CB9	384 aa	Known RBP	13.17	□□□□□ -0.3
GFAP-238	ENST00000640859	LY9	Q9HBG7	655 aa		13.17	□□□□□ -0.3
GFAP-238	ENST00000640859	SENP2	Q9HC62	589 aa		13.17	□□□□□ -0.3
GFAP-238	ENST00000640859	ZSWIM5	Q9P217	1185 aa		13.17	□□□□□ -0.3
GFAP-238	ENST00000640859	CLEC11A	Q9Y240	323 aa		13.17	□□□□□ -0.3
GFAP-238	ENST00000640859	KDM4A	O75164	1064 aa		13.16	□□□□□ -0.3
GFAP-238	ENST00000640859	HOXA10	P31260	410 aa	Predicted RBP	13.16	□□□□□ -0.3
GFAP-238	ENST00000640859	NASP	P49321	788 aa	Predicted RBP	13.16	□□□□□ -0.3
GFAP-238	ENST00000640859	PPARA	Q07869	468 aa		13.16	□□□□□ -0.3
GFAP-238	ENST00000640859	TMEM67	Q5HYA8	995 aa		13.16	□□□□□ -0.3
GFAP-238	ENST00000640859	ATL3	Q6DD88	541 aa		13.16	□□□□□ -0.3
GFAP-238	ENST00000640859	GIMAP6	Q6P9H5	292 aa		13.16	□□□□□ -0.3
GFAP-238	ENST00000640859	APOA5	Q6Q788	366 aa		13.16	□□□□□ -0.3
GFAP-238	ENST00000640859	SPATA32	Q96LK8	384 aa		13.16	□□□□□ -0.3
GFAP-238	ENST00000640859	TSPY26P	Q9H489	355 aa		13.16	□□□□□ -0.3
GFAP-238	ENST00000640859	RNF41	Q9H4P4	317 aa	Predicted RBP	13.16	□□□□□ -0.3
GFAP-238	ENST00000640859	ORC3	Q9UBD5	711 aa	Predicted RBP	13.16	□□□□□ -0.3
GFAP-238	ENST00000640859	KIAA1551	Q9HCM1	1747 aa		13.16	□□□□□ -0.3
GFAP-238	ENST00000640859	XDH	P47989	1333 aa		13.15	□□□□□ -0.3
GFAP-238	ENST00000640859	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.15	□□□□□ -0.3
GFAP-238	ENST00000640859	PPEF1	O14829	653 aa	Predicted RBP	13.15	□□□□□ -0.3
GFAP-238	ENST00000640859	FOSB	P53539	338 aa		13.15	□□□□□ -0.3
GFAP-238	ENST00000640859	MECOM	Q03112	1051 aa		13.15	□□□□□ -0.3
GFAP-238	ENST00000640859	CCDC93	Q567U6	631 aa		13.15	□□□□□ -0.3
GFAP-238	ENST00000640859	RAB11FIP4	Q86YS3	637 aa		13.15	□□□□□ -0.3
GFAP-238	ENST00000640859	TDRD7	Q8NHU6	1098 aa	Known RBP	13.15	□□□□□ -0.3
GFAP-238	ENST00000640859	SDR42E1	Q8WUS8	393 aa		13.15	□□□□□ -0.3
GFAP-238	ENST00000640859	PPP1R9B	Q96SB3	815 aa		13.15	□□□□□ -0.3
GFAP-238	ENST00000640859	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.15	□□□□□ -0.3
GFAP-238	ENST00000640859	RCOR1	Q9UKL0	485 aa		13.15	□□□□□ -0.3
GFAP-238	ENST00000640859	NID2	Q14112	1375 aa		13.15	□□□□□ -0.3
GFAP-238	ENST00000640859	CPLX1	O14810	134 aa		13.14	□□□□□ -0.31
GFAP-238	ENST00000640859	IFIT3	O14879	490 aa	Known RBP	13.14	□□□□□ -0.31
GFAP-238	ENST00000640859	ZBTB43	O43298	467 aa		13.14	□□□□□ -0.31
GFAP-238	ENST00000640859	FGR	P09769	529 aa		13.14	□□□□□ -0.31
GFAP-238	ENST00000640859	KCNA3	P22001	575 aa		13.14	□□□□□ -0.31
GFAP-238	ENST00000640859	CDC27	P30260	824 aa		13.14	□□□□□ -0.31
GFAP-238	ENST00000640859	METAP2	P50579	478 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
GFAP-238	ENST00000640859	GPSM2	P81274	684 aa		13.14	□□□□□ -0.31
GFAP-238	ENST00000640859	CHAF1A	Q13111	956 aa	Predicted RBP	13.14	□□□□□ -0.31
GFAP-238	ENST00000640859	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.14	□□□□□ -0.31
GFAP-238	ENST00000640859	ARHGAP27	Q6ZUM4	889 aa		13.14	□□□□□ -0.31
GFAP-238	ENST00000640859	SLC51A	Q86UW1	340 aa		13.14	□□□□□ -0.31
GFAP-238	ENST00000640859	RTKN2	Q8IZC4	609 aa		13.14	□□□□□ -0.31
GFAP-238	ENST00000640859	PGBD1	Q96JS3	809 aa		13.14	□□□□□ -0.31
GFAP-238	ENST00000640859	ANKIB1	Q9P2G1	1089 aa		13.14	□□□□□ -0.31
GFAP-238	ENST00000640859	CFAP45	Q9UL16	551 aa		13.14	□□□□□ -0.31
GFAP-238	ENST00000640859	MYH2	Q9UKX2	1941 aa		13.13	□□□□□ -0.31
GFAP-238	ENST00000640859	MINDY4B	A8MYZ0	360 aa		13.13	□□□□□ -0.31
GFAP-238	ENST00000640859	C21orf2	O43822	256 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms