RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, human

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCARB2-222	ENST00000640634	TMEM39B	Q9GZU3	492 aa		13.24	□□□□□ -0.29
SCARB2-222	ENST00000640634	FAM198A	Q9UFP1	575 aa		13.24	□□□□□ -0.29
SCARB2-222	ENST00000640634	MYO1B	O43795	1136 aa		13.23	□□□□□ -0.29
SCARB2-222	ENST00000640634	HTRA3	P83110	453 aa		13.23	□□□□□ -0.29
SCARB2-222	ENST00000640634	PICALM	Q13492	652 aa		13.23	□□□□□ -0.29
SCARB2-222	ENST00000640634	SULF1	Q8IWU6	871 aa		13.23	□□□□□ -0.29
SCARB2-222	ENST00000640634	PLCD3	Q8N3E9	789 aa		13.23	□□□□□ -0.29
SCARB2-222	ENST00000640634	LCORL	Q8N3X6	602 aa		13.23	□□□□□ -0.29
SCARB2-222	ENST00000640634	RIOK1	Q9BRS2	568 aa	Known RBP	13.23	□□□□□ -0.29
SCARB2-222	ENST00000640634	PUS7L	Q9H0K6	701 aa	Known RBP	13.23	□□□□□ -0.29
SCARB2-222	ENST00000640634	DEFB129	Q9H1M3	183 aa		13.23	□□□□□ -0.29
SCARB2-222	ENST00000640634	ARMT1	Q9H993	441 aa		13.23	□□□□□ -0.29
SCARB2-222	ENST00000640634	ZNF408	Q9H9D4	720 aa		13.23	□□□□□ -0.29
SCARB2-222	ENST00000640634	PASK	Q96RG2	1323 aa		13.23	□□□□□ -0.29
SCARB2-222	ENST00000640634		M0R2C6	588 aa		13.22	□□□□□ -0.29
SCARB2-222	ENST00000640634	MMP14	P50281	582 aa		13.22	□□□□□ -0.29
SCARB2-222	ENST00000640634	RASA3	Q14644	834 aa		13.22	□□□□□ -0.29
SCARB2-222	ENST00000640634	SLC4A8	Q2Y0W8	1093 aa		13.22	□□□□□ -0.29
SCARB2-222	ENST00000640634	CDC37L1	Q7L3B6	337 aa		13.22	□□□□□ -0.29
SCARB2-222	ENST00000640634	OSBP2	Q969R2	916 aa		13.22	□□□□□ -0.29
SCARB2-222	ENST00000640634	CDCA5	Q96FF9	252 aa		13.22	□□□□□ -0.29
SCARB2-222	ENST00000640634	PITPNM2	Q9BZ72	1349 aa		13.22	□□□□□ -0.29
SCARB2-222	ENST00000640634	PRKAB2	O43741	272 aa		13.22	□□□□□ -0.29
SCARB2-222	ENST00000640634	MBD4	O95243	580 aa		13.22	□□□□□ -0.29
SCARB2-222	ENST00000640634	LDHC	P07864	332 aa		13.22	□□□□□ -0.29
SCARB2-222	ENST00000640634	SDS	P20132	328 aa		13.22	□□□□□ -0.29
SCARB2-222	ENST00000640634	BRD2	P25440	801 aa	Known RBP	13.22	□□□□□ -0.29
SCARB2-222	ENST00000640634	EVX2	Q03828	476 aa		13.22	□□□□□ -0.29
SCARB2-222	ENST00000640634	SLF2	Q8IX21	1173 aa		13.22	□□□□□ -0.29
SCARB2-222	ENST00000640634	EVI5L	Q96CN4	794 aa		13.22	□□□□□ -0.29
SCARB2-222	ENST00000640634	FAM227B	Q96M60	508 aa		13.22	□□□□□ -0.29
SCARB2-222	ENST00000640634	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
SCARB2-222	ENST00000640634	PCNT	O95613	3336 aa		13.21	□□□□□ -0.29
SCARB2-222	ENST00000640634	AK9	Q5TCS8	1911 aa		13.21	□□□□□ -0.29
SCARB2-222	ENST00000640634	RNF113A	O15541	343 aa	Known RBP	13.21	□□□□□ -0.3
SCARB2-222	ENST00000640634	C1QTNF8	P60827	252 aa		13.21	□□□□□ -0.3
SCARB2-222	ENST00000640634	FSTL1	Q12841	308 aa		13.21	□□□□□ -0.3
SCARB2-222	ENST00000640634	PRKG1	Q13976	671 aa		13.21	□□□□□ -0.3
SCARB2-222	ENST00000640634	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.21	□□□□□ -0.3
SCARB2-222	ENST00000640634	CST9	Q5W186	159 aa		13.21	□□□□□ -0.3
SCARB2-222	ENST00000640634	CCDC129	Q6ZRS4	1044 aa		13.21	□□□□□ -0.3
SCARB2-222	ENST00000640634	MOB2	Q70IA6	237 aa		13.21	□□□□□ -0.3
SCARB2-222	ENST00000640634	SH3BP5L	Q7L8J4	393 aa		13.21	□□□□□ -0.3
SCARB2-222	ENST00000640634	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.21	□□□□□ -0.3
SCARB2-222	ENST00000640634	MAPKAPK5	Q8IW41	473 aa		13.21	□□□□□ -0.3
SCARB2-222	ENST00000640634	TEX11	Q8IYF3	940 aa		13.21	□□□□□ -0.3
SCARB2-222	ENST00000640634	TEPSIN	Q96N21	525 aa		13.21	□□□□□ -0.3
SCARB2-222	ENST00000640634	FOCAD	Q5VW36	1801 aa		13.2	□□□□□ -0.3
SCARB2-222	ENST00000640634		A0A0D9SFI3	127 aa		13.2	□□□□□ -0.3
SCARB2-222	ENST00000640634	MAGEB6P1	A0A0J9YX57	407 aa		13.2	□□□□□ -0.3
SCARB2-222	ENST00000640634	PPP4C	P60510	307 aa		13.2	□□□□□ -0.3
SCARB2-222	ENST00000640634	UBE3C	Q15386	1083 aa		13.2	□□□□□ -0.3
SCARB2-222	ENST00000640634	TGFBRAP1	Q8WUH2	860 aa		13.2	□□□□□ -0.3
SCARB2-222	ENST00000640634	SDR42E1	Q8WUS8	393 aa		13.2	□□□□□ -0.3
SCARB2-222	ENST00000640634	IL25	Q9H293	177 aa		13.2	□□□□□ -0.3
SCARB2-222	ENST00000640634	SMIM22	K7EJ46	135 aa		13.19	□□□□□ -0.3
SCARB2-222	ENST00000640634	ZMYND10	O75800	440 aa		13.19	□□□□□ -0.3
SCARB2-222	ENST00000640634	CELF2	O95319	508 aa	Known RBP	13.19	□□□□□ -0.3
SCARB2-222	ENST00000640634	FLT1	P17948	1338 aa		13.19	□□□□□ -0.3
SCARB2-222	ENST00000640634	NMI	Q13287	307 aa	Predicted RBP	13.19	□□□□□ -0.3
SCARB2-222	ENST00000640634	DDX60L	Q5H9U9	1706 aa	Known RBP	13.19	□□□□□ -0.3
SCARB2-222	ENST00000640634	TMOD2	Q9NZR1	351 aa		13.19	□□□□□ -0.3
SCARB2-222	ENST00000640634	SAP30BP	Q9UHR5	308 aa	Known RBP	13.19	□□□□□ -0.3
SCARB2-222	ENST00000640634	SIPA1L1	O43166	1804 aa		13.19	□□□□□ -0.3
SCARB2-222	ENST00000640634	DDTL	A6NHG4	134 aa	Predicted RBP	13.19	□□□□□ -0.3
SCARB2-222	ENST00000640634	BAG3	O95817	575 aa		13.19	□□□□□ -0.3
SCARB2-222	ENST00000640634	ZMYM1	Q5SVZ6	1142 aa		13.19	□□□□□ -0.3
SCARB2-222	ENST00000640634	APPBP2	Q92624	585 aa		13.19	□□□□□ -0.3
SCARB2-222	ENST00000640634	NOL10	Q9BSC4	688 aa	Known RBP	13.19	□□□□□ -0.3
SCARB2-222	ENST00000640634	IDI2	Q9BXS1	227 aa		13.19	□□□□□ -0.3
SCARB2-222	ENST00000640634	FAM196B	A6NMK8	535 aa		13.18	□□□□□ -0.3
SCARB2-222	ENST00000640634	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.18	□□□□□ -0.3
SCARB2-222	ENST00000640634	NAV1	Q8NEY1	1877 aa		13.18	□□□□□ -0.3
SCARB2-222	ENST00000640634	TRPM7	Q96QT4	1865 aa		13.18	□□□□□ -0.3
SCARB2-222	ENST00000640634	FOXP2	O15409	715 aa		13.17	□□□□□ -0.3
SCARB2-222	ENST00000640634	GPAA1	O43292	621 aa		13.17	□□□□□ -0.3
SCARB2-222	ENST00000640634	ZSCAN25	Q6NSZ9	544 aa		13.17	□□□□□ -0.3
SCARB2-222	ENST00000640634	FAM151A	Q8WW52	585 aa		13.17	□□□□□ -0.3
SCARB2-222	ENST00000640634	AIDA	Q96BJ3	306 aa		13.17	□□□□□ -0.3
SCARB2-222	ENST00000640634	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.17	□□□□□ -0.3
SCARB2-222	ENST00000640634	PALD1	Q9ULE6	856 aa		13.17	□□□□□ -0.3
SCARB2-222	ENST00000640634	ATRNL1	Q5VV63	1379 aa		13.17	□□□□□ -0.3
SCARB2-222	ENST00000640634	CYP2D6	P10635	497 aa		13.16	□□□□□ -0.3
SCARB2-222	ENST00000640634	TNFAIP1	Q13829	316 aa		13.16	□□□□□ -0.3
SCARB2-222	ENST00000640634	VPS53	Q5VIR6	699 aa		13.16	□□□□□ -0.3
SCARB2-222	ENST00000640634	FKBP1C	Q5VVH2	108 aa		13.16	□□□□□ -0.3
SCARB2-222	ENST00000640634	MIGA2	Q7L4E1	593 aa		13.16	□□□□□ -0.3
SCARB2-222	ENST00000640634	FAM83A	Q86UY5	434 aa		13.16	□□□□□ -0.3
SCARB2-222	ENST00000640634	STRBP	Q96SI9	672 aa	Known RBP	13.16	□□□□□ -0.3
SCARB2-222	ENST00000640634	GZF1	Q9H116	711 aa	Predicted RBP	13.16	□□□□□ -0.3
SCARB2-222	ENST00000640634	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.16	□□□□□ -0.3
SCARB2-222	ENST00000640634	OTOF	Q9HC10	1997 aa		13.16	□□□□□ -0.3
SCARB2-222	ENST00000640634	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.16	□□□□□ -0.3
SCARB2-222	ENST00000640634	CYP2D7	A0A087X1C5	515 aa		13.16	□□□□□ -0.3
SCARB2-222	ENST00000640634	ZFY	P08048	801 aa	Predicted RBP	13.16	□□□□□ -0.3
SCARB2-222	ENST00000640634	USP5	P45974	858 aa		13.16	□□□□□ -0.3
SCARB2-222	ENST00000640634	TNNI2	P48788	182 aa		13.16	□□□□□ -0.3
SCARB2-222	ENST00000640634	APLP1	P51693	650 aa		13.16	□□□□□ -0.3
SCARB2-222	ENST00000640634	CWC27	Q6UX04	472 aa	Known RBP	13.16	□□□□□ -0.3
SCARB2-222	ENST00000640634	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.16	□□□□□ -0.3

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