RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 ATRNL1Q5VV63 1379 aa17.68■□□□□ 0.42
HNRNPU-229ENST00000640440 IRF6O14896 467 aa17.68■□□□□ 0.42
HNRNPU-229ENST00000640440 PPIL2Q13356 520 aa17.68■□□□□ 0.42
HNRNPU-229ENST00000640440 PKN2Q16513 984 aaKnown RBP17.68■□□□□ 0.42
HNRNPU-229ENST00000640440 ZSCAN29Q8IWY8 852 aaPredicted RBP17.68■□□□□ 0.42
HNRNPU-229ENST00000640440 TLR7Q9NYK1 1049 aaKnown RBP17.68■□□□□ 0.42
HNRNPU-229ENST00000640440 LRP2BPQ9P2M1 347 aa17.68■□□□□ 0.42
HNRNPU-229ENST00000640440 ZNF112Q9UJU3 913 aa17.68■□□□□ 0.42
HNRNPU-229ENST00000640440 DBNLQ9UJU6 430 aaKnown RBP17.68■□□□□ 0.42
HNRNPU-229ENST00000640440 EXOC6BQ9Y2D4 811 aa17.68■□□□□ 0.42
HNRNPU-229ENST00000640440 PHIPQ8WWQ0 1821 aa17.68■□□□□ 0.42
HNRNPU-229ENST00000640440 HTTP42858 3142 aa17.67■□□□□ 0.42
HNRNPU-229ENST00000640440 LDHCP07864 332 aa17.67■□□□□ 0.42
HNRNPU-229ENST00000640440 RHBDL3P58872 404 aa17.67■□□□□ 0.42
HNRNPU-229ENST00000640440 SNAPC2Q13487 334 aa17.67■□□□□ 0.42
HNRNPU-229ENST00000640440 TAF1CQ15572 869 aaPredicted RBP17.67■□□□□ 0.42
HNRNPU-229ENST00000640440 SH3BP5LQ7L8J4 393 aa17.67■□□□□ 0.42
HNRNPU-229ENST00000640440 FAM43AQ8N2R8 423 aa17.67■□□□□ 0.42
HNRNPU-229ENST00000640440 CCDC8Q9H0W5 538 aaPredicted RBP17.67■□□□□ 0.42
HNRNPU-229ENST00000640440 HPS5Q9UPZ3 1129 aa17.67■□□□□ 0.42
HNRNPU-229ENST00000640440 COG6Q9Y2V7 657 aa17.67■□□□□ 0.42
HNRNPU-229ENST00000640440 DDTLA6NHG4 134 aaPredicted RBP17.66■□□□□ 0.42
HNRNPU-229ENST00000640440 CETPP11597 493 aa17.66■□□□□ 0.42
HNRNPU-229ENST00000640440 PPATQ06203 517 aa17.66■□□□□ 0.42
HNRNPU-229ENST00000640440 NOL9Q5SY16 702 aaKnown RBP17.66■□□□□ 0.42
HNRNPU-229ENST00000640440 PPP4R3CPQ6ZMV5 832 aa17.66■□□□□ 0.42
HNRNPU-229ENST00000640440 EAF2Q96CJ1 260 aaPredicted RBP17.66■□□□□ 0.42
HNRNPU-229ENST00000640440 ZSWIM8A7E2V4 1837 aa17.65■□□□□ 0.42
HNRNPU-229ENST00000640440 ERC1Q8IUD2 1116 aa17.65■□□□□ 0.42
HNRNPU-229ENST00000640440 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.65■□□□□ 0.42
HNRNPU-229ENST00000640440 DDX19BQ9UMR2 479 aa17.65■□□□□ 0.42
HNRNPU-229ENST00000640440 TRIM17Q9Y577 477 aa17.65■□□□□ 0.42
HNRNPU-229ENST00000640440 SIPA1L1O43166 1804 aa17.65■□□□□ 0.42
HNRNPU-229ENST00000640440 MYH1P12882 1939 aa17.64■□□□□ 0.42
HNRNPU-229ENST00000640440 BTBD19C9JJ37 291 aa17.64■□□□□ 0.41
HNRNPU-229ENST00000640440 CYP2E1P05181 493 aaPredicted RBP17.64■□□□□ 0.41
HNRNPU-229ENST00000640440 SLURP2P0DP57 97 aa17.64■□□□□ 0.41
HNRNPU-229ENST00000640440 SOX10P56693 466 aa17.64■□□□□ 0.41
HNRNPU-229ENST00000640440 NAA16Q6N069 864 aaPredicted RBP17.64■□□□□ 0.41
HNRNPU-229ENST00000640440 FBXO46Q6PJ61 603 aaPredicted RBP17.64■□□□□ 0.41
HNRNPU-229ENST00000640440 AACSQ86V21 672 aa17.64■□□□□ 0.41
HNRNPU-229ENST00000640440 CD99L2Q8TCZ2 262 aa17.64■□□□□ 0.41
HNRNPU-229ENST00000640440 ERO1AQ96HE7 468 aa17.64■□□□□ 0.41
HNRNPU-229ENST00000640440 ZNF512BQ96KM6 892 aaPredicted RBP17.64■□□□□ 0.41
HNRNPU-229ENST00000640440 ZFYVE28Q9HCC9 887 aa17.64■□□□□ 0.41
HNRNPU-229ENST00000640440 CENPFP49454 3210 aa17.64■□□□□ 0.41
HNRNPU-229ENST00000640440 PHF20L1A8MW92 1017 aa17.63■□□□□ 0.41
HNRNPU-229ENST00000640440 ZAP70P43403 619 aa17.63■□□□□ 0.41
HNRNPU-229ENST00000640440 RGS19P49795 217 aa17.63■□□□□ 0.41
HNRNPU-229ENST00000640440 SP3Q02447 781 aa17.63■□□□□ 0.41
HNRNPU-229ENST00000640440 OTOP1Q7RTM1 612 aa17.63■□□□□ 0.41
HNRNPU-229ENST00000640440 TEX11Q8IYF3 940 aa17.63■□□□□ 0.41
HNRNPU-229ENST00000640440 NOL10Q9BSC4 688 aaKnown RBP17.63■□□□□ 0.41
HNRNPU-229ENST00000640440 NPM3O75607 178 aaKnown RBP17.62■□□□□ 0.41
HNRNPU-229ENST00000640440 MAP4K4O95819 1239 aaPredicted RBP17.62■□□□□ 0.41
HNRNPU-229ENST00000640440 MLLT1Q03111 559 aaPredicted RBP17.62■□□□□ 0.41
HNRNPU-229ENST00000640440 SCYL3Q8IZE3 742 aa17.62■□□□□ 0.41
HNRNPU-229ENST00000640440 SH3RF3Q8TEJ3 882 aaPredicted RBP17.62■□□□□ 0.41
HNRNPU-229ENST00000640440 IL1RAPL2Q9NP60 686 aa17.62■□□□□ 0.41
HNRNPU-229ENST00000640440 PIH1D3Q9NQM4 214 aaKnown RBP17.62■□□□□ 0.41
HNRNPU-229ENST00000640440 PICK1Q9NRD5 415 aa17.62■□□□□ 0.41
HNRNPU-229ENST00000640440 ZBTB40Q9NUA8 1239 aa17.62■□□□□ 0.41
HNRNPU-229ENST00000640440 AATFQ9NY61 560 aaKnown RBP eCLIP17.62■□□□□ 0.412e-7■■□□□ 11.8
HNRNPU-229ENST00000640440 KCNH4Q9UQ05 1017 aa17.62■□□□□ 0.41
HNRNPU-229ENST00000640440 COL2A1P02458 1487 aaPredicted RBP17.62■□□□□ 0.41
HNRNPU-229ENST00000640440 APBB1O00213 710 aa17.61■□□□□ 0.41
HNRNPU-229ENST00000640440 MAP3K10Q02779 954 aa17.61■□□□□ 0.41
HNRNPU-229ENST00000640440 HSP90AB4PQ58FF6 505 aa17.61■□□□□ 0.41
HNRNPU-229ENST00000640440 ADGRA1Q86SQ6 560 aa17.61■□□□□ 0.41
HNRNPU-229ENST00000640440 RPAP2Q8IXW5 612 aaPredicted RBP17.61■□□□□ 0.41
HNRNPU-229ENST00000640440 RHPN1Q8TCX5 695 aa17.61■□□□□ 0.41
HNRNPU-229ENST00000640440 OSBPL5Q9H0X9 879 aaPredicted RBP17.61■□□□□ 0.41
HNRNPU-229ENST00000640440 ZCCHC17Q9NP64 241 aaKnown RBP17.61■□□□□ 0.41
HNRNPU-229ENST00000640440 NDUFB9Q9Y6M9 179 aa17.61■□□□□ 0.41
HNRNPU-229ENST00000640440 MGAMO43451 1857 aa17.61■□□□□ 0.41
HNRNPU-229ENST00000640440 FAM196BA6NMK8 535 aa17.6■□□□□ 0.41
HNRNPU-229ENST00000640440 HMMRO75330 724 aa17.6■□□□□ 0.41
HNRNPU-229ENST00000640440 BAG3O95817 575 aa17.6■□□□□ 0.41
HNRNPU-229ENST00000640440 PTPRAP18433 802 aa17.6■□□□□ 0.41
HNRNPU-229ENST00000640440 CAP1Q01518 475 aa17.6■□□□□ 0.41
HNRNPU-229ENST00000640440 C20orf194Q5TEA3 1177 aa17.6■□□□□ 0.41
HNRNPU-229ENST00000640440 SIRT2Q8IXJ6 389 aa17.6■□□□□ 0.41
HNRNPU-229ENST00000640440 EFCC1Q9HA90 598 aa17.6■□□□□ 0.41
HNRNPU-229ENST00000640440 DOCK3Q8IZD9 2030 aa17.59■□□□□ 0.41
HNRNPU-229ENST00000640440 MYH7P12883 1935 aa17.59■□□□□ 0.41
HNRNPU-229ENST00000640440 CTNND1O60716 968 aaKnown RBP17.59■□□□□ 0.41
HNRNPU-229ENST00000640440 IDH1O75874 414 aaKnown RBP17.59■□□□□ 0.41
HNRNPU-229ENST00000640440 PLCG2P16885 1265 aa17.59■□□□□ 0.41
HNRNPU-229ENST00000640440 BCL11AQ9H165 835 aa17.59■□□□□ 0.41
HNRNPU-229ENST00000640440 CHMP4BQ9H444 224 aaKnown RBP17.59■□□□□ 0.41
HNRNPU-229ENST00000640440 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.59■□□□□ 0.41
HNRNPU-229ENST00000640440 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.59■□□□□ 0.41
HNRNPU-229ENST00000640440 ZHX2Q9Y6X8 837 aa17.59■□□□□ 0.41
HNRNPU-229ENST00000640440 TNRC18O15417 2968 aaPredicted RBP17.59■□□□□ 0.41
HNRNPU-229ENST00000640440 PDHXO00330 501 aa17.58■□□□□ 0.4
HNRNPU-229ENST00000640440 TBC1D12O60347 775 aa17.58■□□□□ 0.4
HNRNPU-229ENST00000640440 TLR2O60603 784 aa17.58■□□□□ 0.4
HNRNPU-229ENST00000640440 MOGSQ13724 837 aa17.58■□□□□ 0.4
HNRNPU-229ENST00000640440 ANKRD23Q86SG2 305 aa17.58■□□□□ 0.4
HNRNPU-229ENST00000640440 TGFBRAP1Q8WUH2 860 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms