RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 KCNQ5Q9NR82 932 aa9.21□□□□□ -0.94
NECAP1-220ENST00000639841 UBP1Q9NZI7 540 aa9.21□□□□□ -0.94
NECAP1-220ENST00000639841 SBNO1A3KN83 1393 aa9.2□□□□□ -0.94
NECAP1-220ENST00000639841 EPB41L2O43491 1005 aaKnown RBP9.2□□□□□ -0.94
NECAP1-220ENST00000639841 KATNA1O75449 491 aa9.2□□□□□ -0.94
NECAP1-220ENST00000639841 C4orf48Q5BLP8 95 aa9.2□□□□□ -0.94
NECAP1-220ENST00000639841 AXDND1Q5T1B0 1012 aaPredicted RBP9.2□□□□□ -0.94
NECAP1-220ENST00000639841 SLC4A10Q6U841 1118 aa9.2□□□□□ -0.94
NECAP1-220ENST00000639841 SPATC1Q76KD6 591 aa9.2□□□□□ -0.94
NECAP1-220ENST00000639841 RNF180Q86T96 592 aa9.2□□□□□ -0.94
NECAP1-220ENST00000639841 MFSD3Q96ES6 412 aa9.2□□□□□ -0.94
NECAP1-220ENST00000639841 CAAP1Q9H8G2 361 aa9.2□□□□□ -0.94
NECAP1-220ENST00000639841 ARHGEF10LQ9HCE6 1279 aa9.2□□□□□ -0.94
NECAP1-220ENST00000639841 RALGAPBQ86X10 1494 aa9.2□□□□□ -0.94
NECAP1-220ENST00000639841 KDM2BQ8NHM5 1336 aa9.19□□□□□ -0.94
NECAP1-220ENST00000639841 A6NJY4 79 aa9.19□□□□□ -0.94
NECAP1-220ENST00000639841 PRPF3O43395 683 aaKnown RBP9.19□□□□□ -0.94
NECAP1-220ENST00000639841 DXOO77932 396 aaKnown RBP9.19□□□□□ -0.94
NECAP1-220ENST00000639841 GARTP22102 1010 aa9.19□□□□□ -0.94
NECAP1-220ENST00000639841 GRAMD1BQ3KR37 738 aa9.19□□□□□ -0.94
NECAP1-220ENST00000639841 MTERF2Q49AM1 385 aa9.19□□□□□ -0.94
NECAP1-220ENST00000639841 ESCO1Q5FWF5 840 aa9.19□□□□□ -0.94
NECAP1-220ENST00000639841 ERAP2Q6P179 960 aa9.19□□□□□ -0.94
NECAP1-220ENST00000639841 SYNPOQ8N3V7 929 aa9.19□□□□□ -0.94
NECAP1-220ENST00000639841 TMEM74Q96NL1 305 aa9.19□□□□□ -0.94
NECAP1-220ENST00000639841 SCHIP1Q9P0W5 487 aaPredicted RBP9.19□□□□□ -0.94
NECAP1-220ENST00000639841 PFDN2Q9UHV9 154 aa9.19□□□□□ -0.94
NECAP1-220ENST00000639841 MCM8Q9UJA3 840 aa9.19□□□□□ -0.94
NECAP1-220ENST00000639841 IFT172Q9UG01 1749 aa9.19□□□□□ -0.94
NECAP1-220ENST00000639841 TNS3Q68CZ2 1445 aa9.19□□□□□ -0.94
NECAP1-220ENST00000639841 GLI3P10071 1580 aa9.19□□□□□ -0.94
NECAP1-220ENST00000639841 IRS4O14654 1257 aaPredicted RBP9.19□□□□□ -0.94
NECAP1-220ENST00000639841 INHAP05111 366 aa9.19□□□□□ -0.94
NECAP1-220ENST00000639841 GBP2P32456 591 aaPredicted RBP9.19□□□□□ -0.94
NECAP1-220ENST00000639841 GUCY2FP51841 1108 aa9.19□□□□□ -0.94
NECAP1-220ENST00000639841 C8orf34Q49A92 452 aa9.19□□□□□ -0.94
NECAP1-220ENST00000639841 SPICE1Q8N0Z3 855 aa9.19□□□□□ -0.94
NECAP1-220ENST00000639841 MYRIPQ8NFW9 859 aa9.19□□□□□ -0.94
NECAP1-220ENST00000639841 ORAI2Q96SN7 254 aa9.19□□□□□ -0.94
NECAP1-220ENST00000639841 RTFDC1Q9BY42 306 aaPredicted RBP9.19□□□□□ -0.94
NECAP1-220ENST00000639841 CDV3Q9UKY7 258 aaKnown RBP9.19□□□□□ -0.94
NECAP1-220ENST00000639841 PPT2Q9UMR5 302 aa9.19□□□□□ -0.94
NECAP1-220ENST00000639841 RGPD1P0DJD0 1748 aa9.19□□□□□ -0.94
NECAP1-220ENST00000639841 SPATA31A3Q5VYP0 1347 aa9.18□□□□□ -0.94
NECAP1-220ENST00000639841 ST18O60284 1047 aa9.18□□□□□ -0.94
NECAP1-220ENST00000639841 NEK2P51955 445 aa9.18□□□□□ -0.94
NECAP1-220ENST00000639841 SIM2Q14190 667 aaPredicted RBP9.18□□□□□ -0.94
NECAP1-220ENST00000639841 CCDC184Q52MB2 194 aa9.18□□□□□ -0.94
NECAP1-220ENST00000639841 NIM1KQ8IY84 436 aa9.18□□□□□ -0.94
NECAP1-220ENST00000639841 SEPT12Q8IYM1 358 aa9.18□□□□□ -0.94
NECAP1-220ENST00000639841 GPR152Q8TDT2 470 aa9.18□□□□□ -0.94
NECAP1-220ENST00000639841 NINJ1Q92982 152 aa9.18□□□□□ -0.94
NECAP1-220ENST00000639841 RUNDC1Q96C34 613 aa9.18□□□□□ -0.94
NECAP1-220ENST00000639841 RHOVQ96L33 236 aa9.18□□□□□ -0.94
NECAP1-220ENST00000639841 NEUROD6Q96NK8 337 aa9.18□□□□□ -0.94
NECAP1-220ENST00000639841 SLC4A9Q96Q91 983 aa9.18□□□□□ -0.94
NECAP1-220ENST00000639841 UNC93B1Q9H1C4 597 aa9.18□□□□□ -0.94
NECAP1-220ENST00000639841 FOXD3Q9UJU5 478 aaPredicted RBP9.18□□□□□ -0.94
NECAP1-220ENST00000639841 ANKARQ7Z5J8 1434 aa9.18□□□□□ -0.94
NECAP1-220ENST00000639841 ADGRB2O60241 1585 aa9.18□□□□□ -0.94
NECAP1-220ENST00000639841 PLCH1Q4KWH8 1693 aa9.17□□□□□ -0.94
NECAP1-220ENST00000639841 GREM1O60565 184 aa9.17□□□□□ -0.94
NECAP1-220ENST00000639841 VARSP26640 1264 aaKnown RBP9.17□□□□□ -0.94
NECAP1-220ENST00000639841 CRKP46108 304 aa9.17□□□□□ -0.94
NECAP1-220ENST00000639841 BAG6P46379 1132 aa9.17□□□□□ -0.94
NECAP1-220ENST00000639841 MORC3Q14149 939 aa9.17□□□□□ -0.94
NECAP1-220ENST00000639841 PAF1Q8N7H5 531 aa9.17□□□□□ -0.94
NECAP1-220ENST00000639841 KCNK17Q96T54 332 aa9.17□□□□□ -0.94
NECAP1-220ENST00000639841 BCO2Q9BYV7 579 aa9.17□□□□□ -0.94
NECAP1-220ENST00000639841 SRCIN1Q9C0H9 1055 aa9.17□□□□□ -0.94
NECAP1-220ENST00000639841 CDH19Q9H159 772 aa9.17□□□□□ -0.94
NECAP1-220ENST00000639841 ETNK1Q9HBU6 452 aa9.17□□□□□ -0.94
NECAP1-220ENST00000639841 NPHP1O15259 732 aa9.17□□□□□ -0.94
NECAP1-220ENST00000639841 LDHCP07864 332 aa9.17□□□□□ -0.94
NECAP1-220ENST00000639841 FAM98CQ17RN3 349 aaKnown RBP9.17□□□□□ -0.94
NECAP1-220ENST00000639841 PTCRAQ6ISU1 281 aaPredicted RBP9.17□□□□□ -0.94
NECAP1-220ENST00000639841 ANKRD13DQ6ZTN6 518 aa9.17□□□□□ -0.94
NECAP1-220ENST00000639841 RELL1Q8IUW5 271 aa9.17□□□□□ -0.94
NECAP1-220ENST00000639841 SCUBE3Q8IX30 993 aa9.17□□□□□ -0.94
NECAP1-220ENST00000639841 C1orf131Q8NDD1 294 aaKnown RBP9.17□□□□□ -0.94
NECAP1-220ENST00000639841 SLC10A4Q96EP9 437 aa9.17□□□□□ -0.94
NECAP1-220ENST00000639841 ZHX3Q9H4I2 956 aa9.17□□□□□ -0.94
NECAP1-220ENST00000639841 ACTR10Q9NZ32 417 aa9.17□□□□□ -0.94
NECAP1-220ENST00000639841 PDE8AO60658 829 aa9.16□□□□□ -0.94
NECAP1-220ENST00000639841 PWP1Q13610 501 aa9.16□□□□□ -0.94
NECAP1-220ENST00000639841 AFAP1L2Q8N4X5 818 aa9.16□□□□□ -0.94
NECAP1-220ENST00000639841 DDX17Q92841 729 aaKnown RBP9.16□□□□□ -0.94
NECAP1-220ENST00000639841 OSBPL3Q9H4L5 887 aa9.16□□□□□ -0.94
NECAP1-220ENST00000639841 USP3Q9Y6I4 520 aa9.16□□□□□ -0.94
NECAP1-220ENST00000639841 DLC1Q96QB1 1528 aa9.16□□□□□ -0.94
NECAP1-220ENST00000639841 PARD3Q8TEW0 1356 aa9.16□□□□□ -0.94
NECAP1-220ENST00000639841 ABCA3Q99758 1704 aa9.16□□□□□ -0.94
NECAP1-220ENST00000639841 KAT6BQ8WYB5 2073 aa9.16□□□□□ -0.94
NECAP1-220ENST00000639841 CCDC163A0A0D9SF12 145 aa9.15□□□□□ -0.94
NECAP1-220ENST00000639841 HSP90AA1P07900 732 aaKnown RBP9.15□□□□□ -0.94
NECAP1-220ENST00000639841 RASSF7Q02833 373 aa9.15□□□□□ -0.94
NECAP1-220ENST00000639841 FAM160A1Q05DH4 1040 aa9.15□□□□□ -0.94
NECAP1-220ENST00000639841 DGKZQ13574 1117 aa9.15□□□□□ -0.94
NECAP1-220ENST00000639841 FAM83BQ5T0W9 1011 aa9.15□□□□□ -0.94
NECAP1-220ENST00000639841 PRPF40BQ6NWY9 871 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms