RNA–Protein interactions for RNA: ENST00000639489.1

KCNMA1-262, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,302 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-262ENST00000639489 IFNL3Q8IZI9 196 aa16.85■□□□□ 0.29
KCNMA1-262ENST00000639489 BICD1Q96G01 975 aa16.85■□□□□ 0.29
KCNMA1-262ENST00000639489 CDK12Q9NYV4 1490 aaPredicted RBP16.85■□□□□ 0.29
KCNMA1-262ENST00000639489 TET3O43151 1660 aa16.85■□□□□ 0.29
KCNMA1-262ENST00000639489 CRKLP46109 303 aaKnown RBP16.84■□□□□ 0.29
KCNMA1-262ENST00000639489 SP4Q02446 784 aa16.84■□□□□ 0.29
KCNMA1-262ENST00000639489 UBXN1Q04323 297 aa16.84■□□□□ 0.29
KCNMA1-262ENST00000639489 PLS1Q14651 629 aa16.84■□□□□ 0.29
KCNMA1-262ENST00000639489 USPL1Q5W0Q7 1092 aa16.84■□□□□ 0.29
KCNMA1-262ENST00000639489 CCDC113Q9H0I3 377 aa16.84■□□□□ 0.29
KCNMA1-262ENST00000639489 ZBTB21Q9ULJ3 1066 aa16.84■□□□□ 0.29
KCNMA1-262ENST00000639489 CYP21A2P08686 494 aa16.84■□□□□ 0.29
KCNMA1-262ENST00000639489 CYLC1P35663 651 aaPredicted RBP16.84■□□□□ 0.29
KCNMA1-262ENST00000639489 MAP9Q49MG5 647 aa16.84■□□□□ 0.29
KCNMA1-262ENST00000639489 USP28Q96RU2 1077 aa16.84■□□□□ 0.29
KCNMA1-262ENST00000639489 CBX8Q9HC52 389 aa16.84■□□□□ 0.29
KCNMA1-262ENST00000639489 CGNQ9P2M7 1197 aaKnown RBP16.84■□□□□ 0.29
KCNMA1-262ENST00000639489 PUF60Q9UHX1 559 aaKnown RBP16.84■□□□□ 0.29
KCNMA1-262ENST00000639489 A2ML1A8K2U0 1454 aa16.84■□□□□ 0.29
KCNMA1-262ENST00000639489 ANKRD62A6NC57 917 aa16.84■□□□□ 0.29
KCNMA1-262ENST00000639489 CYP27B1O15528 508 aa16.84■□□□□ 0.29
KCNMA1-262ENST00000639489 MRPL12P52815 198 aaKnown RBP16.84■□□□□ 0.29
KCNMA1-262ENST00000639489 GTF2IP78347 998 aa16.84■□□□□ 0.29
KCNMA1-262ENST00000639489 ARHGAP31Q2M1Z3 1444 aa16.84■□□□□ 0.29
KCNMA1-262ENST00000639489 ZNF335Q9H4Z2 1342 aaPredicted RBP16.84■□□□□ 0.29
KCNMA1-262ENST00000639489 CHRNDQ07001 517 aa16.84■□□□□ 0.29
KCNMA1-262ENST00000639489 MFSD14BQ5SR56 506 aa16.84■□□□□ 0.29
KCNMA1-262ENST00000639489 CCDC174Q6PII3 467 aa16.84■□□□□ 0.29
KCNMA1-262ENST00000639489 C17orf53Q8N3J3 647 aaPredicted RBP16.84■□□□□ 0.29
KCNMA1-262ENST00000639489 PKD2L1Q9P0L9 805 aa16.84■□□□□ 0.29
KCNMA1-262ENST00000639489 ECM2O94769 699 aaPredicted RBP16.83■□□□□ 0.29
KCNMA1-262ENST00000639489 TXKP42681 527 aa16.83■□□□□ 0.29
KCNMA1-262ENST00000639489 PPARAQ07869 468 aa16.83■□□□□ 0.29
KCNMA1-262ENST00000639489 ZNF654Q8IZM8 581 aa16.83■□□□□ 0.29
KCNMA1-262ENST00000639489 SEC31BQ9NQW1 1179 aa16.83■□□□□ 0.29
KCNMA1-262ENST00000639489 TTC38Q5R3I4 469 aa16.83■□□□□ 0.28
KCNMA1-262ENST00000639489 MYSM1Q5VVJ2 828 aa16.83■□□□□ 0.28
KCNMA1-262ENST00000639489 PAXIP1Q6ZW49 1069 aaPredicted RBP16.83■□□□□ 0.28
KCNMA1-262ENST00000639489 DYNC1I1O14576 645 aa16.83■□□□□ 0.28
KCNMA1-262ENST00000639489 SASH1O94885 1247 aa16.83■□□□□ 0.28
KCNMA1-262ENST00000639489 PTPN12Q05209 780 aaKnown RBP16.83■□□□□ 0.28
KCNMA1-262ENST00000639489 GSTTP1A0A1W2PQM5 241 aa16.82■□□□□ 0.28
KCNMA1-262ENST00000639489 CCDC175P0C221 793 aa16.82■□□□□ 0.28
KCNMA1-262ENST00000639489 SSH2Q76I76 1423 aa16.82■□□□□ 0.28
KCNMA1-262ENST00000639489 IQGAP3Q86VI3 1631 aa16.82■□□□□ 0.28
KCNMA1-262ENST00000639489 HS1BP3Q53T59 392 aa16.82■□□□□ 0.28
KCNMA1-262ENST00000639489 CCDC42Q96M95 316 aa16.82■□□□□ 0.28
KCNMA1-262ENST00000639489 VPS16Q9H269 839 aa16.82■□□□□ 0.28
KCNMA1-262ENST00000639489 GOPCQ9HD26 462 aa16.82■□□□□ 0.28
KCNMA1-262ENST00000639489 ADCY10Q96PN6 1610 aa16.81■□□□□ 0.28
KCNMA1-262ENST00000639489 KIAA0754O94854 1291 aa16.81■□□□□ 0.28
KCNMA1-262ENST00000639489 ERCC3P19447 782 aa16.81■□□□□ 0.28
KCNMA1-262ENST00000639489 PIGBQ92521 554 aa16.81■□□□□ 0.28
KCNMA1-262ENST00000639489 MAP3K4Q9Y6R4 1608 aa16.81■□□□□ 0.28
KCNMA1-262ENST00000639489 APBA3O96018 575 aa16.81■□□□□ 0.28
KCNMA1-262ENST00000639489 IL6STP40189 918 aaPredicted RBP16.81■□□□□ 0.28
KCNMA1-262ENST00000639489 SLC1A4P43007 532 aa16.81■□□□□ 0.28
KCNMA1-262ENST00000639489 MSL1Q68DK7 614 aa16.81■□□□□ 0.28
KCNMA1-262ENST00000639489 SYT10Q6XYQ8 523 aa16.81■□□□□ 0.28
KCNMA1-262ENST00000639489 ZNF274Q96GC6 653 aaPredicted RBP16.81■□□□□ 0.28
KCNMA1-262ENST00000639489 CCNT1O60563 726 aaKnown RBP16.81■□□□□ 0.28
KCNMA1-262ENST00000639489 TCHPQ9BT92 498 aa16.81■□□□□ 0.28
KCNMA1-262ENST00000639489 GUCA1BQ9UMX6 200 aa16.81■□□□□ 0.28
KCNMA1-262ENST00000639489 CUTAO60888 179 aa16.8■□□□□ 0.28
KCNMA1-262ENST00000639489 DESP17661 470 aa16.8■□□□□ 0.28
KCNMA1-262ENST00000639489 RRAGDQ9NQL2 400 aaPredicted RBP16.8■□□□□ 0.28
KCNMA1-262ENST00000639489 LUC7L2Q9Y383 392 aaKnown RBP16.8■□□□□ 0.28
KCNMA1-262ENST00000639489 SHROOM2Q13796 1616 aa16.8■□□□□ 0.28
KCNMA1-262ENST00000639489 NR1I2O75469 434 aa16.8■□□□□ 0.28
KCNMA1-262ENST00000639489 TNKSO95271 1327 aa16.8■□□□□ 0.28
KCNMA1-262ENST00000639489 WDHD1O75717 1129 aaPredicted RBP16.8■□□□□ 0.28
KCNMA1-262ENST00000639489 IFFO1Q0D2I5 559 aa16.8■□□□□ 0.28
KCNMA1-262ENST00000639489 GJA3Q9Y6H8 435 aa16.8■□□□□ 0.28
KCNMA1-262ENST00000639489 HS2ST1Q7LGA3 356 aa16.79■□□□□ 0.28
KCNMA1-262ENST00000639489 DHX37Q8IY37 1157 aaKnown RBP16.79■□□□□ 0.28
KCNMA1-262ENST00000639489 BCCIPQ9P287 314 aaKnown RBP eCLIP16.79■□□□□ 0.28
KCNMA1-262ENST00000639489 NFE2L3Q9Y4A8 694 aa16.79■□□□□ 0.28
KCNMA1-262ENST00000639489 ARID4AP29374 1257 aaPredicted RBP16.79■□□□□ 0.28
KCNMA1-262ENST00000639489 BTBD18B2RXH4 712 aa16.79■□□□□ 0.28
KCNMA1-262ENST00000639489 H0YIN7 160 aa16.79■□□□□ 0.28
KCNMA1-262ENST00000639489 TRAF5O00463 557 aa16.79■□□□□ 0.28
KCNMA1-262ENST00000639489 PDE4DQ08499 809 aa16.79■□□□□ 0.28
KCNMA1-262ENST00000639489 EPHA10Q5JZY3 1008 aa16.79■□□□□ 0.28
KCNMA1-262ENST00000639489 BRINP3Q76B58 766 aa16.79■□□□□ 0.28
KCNMA1-262ENST00000639489 LARGE2Q8N3Y3 721 aa16.79■□□□□ 0.28
KCNMA1-262ENST00000639489 TTF2Q9UNY4 1162 aaKnown RBP16.79■□□□□ 0.28
KCNMA1-262ENST00000639489 PFKFB2O60825 505 aa16.79■□□□□ 0.28
KCNMA1-262ENST00000639489 FAM13AO94988 1023 aa16.79■□□□□ 0.28
KCNMA1-262ENST00000639489 KRT13P13646 458 aa16.79■□□□□ 0.28
KCNMA1-262ENST00000639489 POLD1P28340 1107 aa16.79■□□□□ 0.28
KCNMA1-262ENST00000639489 KIF5AQ12840 1032 aa16.79■□□□□ 0.28
KCNMA1-262ENST00000639489 TRPM1Q7Z4N2 1603 aa16.79■□□□□ 0.28
KCNMA1-262ENST00000639489 BICDL2A1A5D9 508 aa16.78■□□□□ 0.28
KCNMA1-262ENST00000639489 CHMP2AO43633 222 aa16.78■□□□□ 0.28
KCNMA1-262ENST00000639489 IGKV5-2P06315 115 aa16.78■□□□□ 0.28
KCNMA1-262ENST00000639489 SCRN1Q12765 414 aa16.78■□□□□ 0.28
KCNMA1-262ENST00000639489 SV2BQ7L1I2 683 aa16.78■□□□□ 0.28
KCNMA1-262ENST00000639489 NLRP10Q86W26 655 aa16.78■□□□□ 0.28
KCNMA1-262ENST00000639489 GAS2L3Q86XJ1 694 aa16.78■□□□□ 0.28
KCNMA1-262ENST00000639489 FANCBQ8NB91 859 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms