RNA–Protein interactions for RNA: ENST00000639482.1

SPIN3-222, Transcript of spindlin family member 3, humanhuman

TSL 3

Gene SPIN3, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-222ENST00000639482 MCM6Q14566 821 aa11.55□□□□□ -0.56
SPIN3-222ENST00000639482 RRP12Q5JTH9 1297 aaKnown RBP11.55□□□□□ -0.56
SPIN3-222ENST00000639482 CMTR1Q8N1G2 835 aaKnown RBP11.55□□□□□ -0.56
SPIN3-222ENST00000639482 CNNM3Q8NE01 707 aa11.55□□□□□ -0.56
SPIN3-222ENST00000639482 WDR24Q96S15 920 aa11.55□□□□□ -0.56
SPIN3-222ENST00000639482 RTEL1Q9NZ71 1219 aa11.55□□□□□ -0.56
SPIN3-222ENST00000639482 EXOSC10Q01780 885 aaKnown RBP11.55□□□□□ -0.56
SPIN3-222ENST00000639482 FBXO18Q8NFZ0 1043 aa11.55□□□□□ -0.56
SPIN3-222ENST00000639482 OSBPL5Q9H0X9 879 aaPredicted RBP11.55□□□□□ -0.56
SPIN3-222ENST00000639482 ABCC6O95255 1503 aa11.55□□□□□ -0.56
SPIN3-222ENST00000639482 PHACTR2O75167 634 aa11.55□□□□□ -0.56
SPIN3-222ENST00000639482 FGAP02671 866 aa11.55□□□□□ -0.56
SPIN3-222ENST00000639482 PCCAP05165 728 aaPredicted RBP11.55□□□□□ -0.56
SPIN3-222ENST00000639482 OAS2P29728 719 aaKnown RBP11.55□□□□□ -0.56
SPIN3-222ENST00000639482 LMAN1P49257 510 aa11.55□□□□□ -0.56
SPIN3-222ENST00000639482 STX17P56962 302 aa11.55□□□□□ -0.56
SPIN3-222ENST00000639482 CHMP4CQ96CF2 233 aa11.55□□□□□ -0.56
SPIN3-222ENST00000639482 TRIM34Q9BYJ4 488 aa11.55□□□□□ -0.56
SPIN3-222ENST00000639482 RNF113AO15541 343 aaKnown RBP11.54□□□□□ -0.56
SPIN3-222ENST00000639482 IDH1O75874 414 aaKnown RBP11.54□□□□□ -0.56
SPIN3-222ENST00000639482 TFRCP02786 760 aaKnown RBP11.54□□□□□ -0.56
SPIN3-222ENST00000639482 CASQ1P31415 396 aa11.54□□□□□ -0.56
SPIN3-222ENST00000639482 TAF3Q5VWG9 929 aa11.54□□□□□ -0.56
SPIN3-222ENST00000639482 CCDC12Q8WUD4 166 aaPredicted RBP11.54□□□□□ -0.56
SPIN3-222ENST00000639482 CALCOCO1Q9P1Z2 691 aa11.54□□□□□ -0.56
SPIN3-222ENST00000639482 UBR2Q8IWV8 1755 aa11.54□□□□□ -0.56
SPIN3-222ENST00000639482 FANCGO15287 622 aa11.54□□□□□ -0.56
SPIN3-222ENST00000639482 TOM1O60784 492 aa11.54□□□□□ -0.56
SPIN3-222ENST00000639482 TRDNQ13061 729 aa11.54□□□□□ -0.56
SPIN3-222ENST00000639482 NCAPHQ15003 741 aa11.54□□□□□ -0.56
SPIN3-222ENST00000639482 VPS37DQ86XT2 251 aa11.54□□□□□ -0.56
SPIN3-222ENST00000639482 TEX13AQ9BXU3 409 aaPredicted RBP11.54□□□□□ -0.56
SPIN3-222ENST00000639482 ALDH8A1Q9H2A2 487 aaPredicted RBP11.54□□□□□ -0.56
SPIN3-222ENST00000639482 NIP7Q9Y221 180 aaKnown RBP eCLIP11.54□□□□□ -0.56
SPIN3-222ENST00000639482 TNNT3P45378 269 aaPredicted RBP11.53□□□□□ -0.56
SPIN3-222ENST00000639482 MYL5Q02045 173 aa11.53□□□□□ -0.56
SPIN3-222ENST00000639482 MTF1Q14872 753 aa11.53□□□□□ -0.56
SPIN3-222ENST00000639482 KRBA2Q6ZNG9 492 aa11.53□□□□□ -0.56
SPIN3-222ENST00000639482 AMIGO3Q86WK7 504 aa11.53□□□□□ -0.56
SPIN3-222ENST00000639482 SENP2Q9HC62 589 aa11.53□□□□□ -0.56
SPIN3-222ENST00000639482 IMPACTQ9P2X3 320 aa11.53□□□□□ -0.56
SPIN3-222ENST00000639482 ZNF213O14771 459 aa11.53□□□□□ -0.56
SPIN3-222ENST00000639482 H2AFXP16104 143 aaPredicted RBP11.53□□□□□ -0.56
SPIN3-222ENST00000639482 CTSWP56202 376 aa11.53□□□□□ -0.56
SPIN3-222ENST00000639482 TOGARAM2Q6ZUX3 1019 aa11.53□□□□□ -0.56
SPIN3-222ENST00000639482 PUS7LQ9H0K6 701 aaKnown RBP11.53□□□□□ -0.56
SPIN3-222ENST00000639482 CCDC87Q9NVE4 849 aa11.53□□□□□ -0.56
SPIN3-222ENST00000639482 PCDHA5Q9Y5H7 936 aa11.53□□□□□ -0.56
SPIN3-222ENST00000639482 SPATA31A5Q5VU36 1347 aa11.53□□□□□ -0.56
SPIN3-222ENST00000639482 SPATA31A7Q8IWB4 1347 aa11.53□□□□□ -0.56
SPIN3-222ENST00000639482 LAMB4A4D0S4 1761 aa11.53□□□□□ -0.56
SPIN3-222ENST00000639482 ZMYM1Q5SVZ6 1142 aa11.53□□□□□ -0.56
SPIN3-222ENST00000639482 WWC2Q6AWC2 1192 aa11.53□□□□□ -0.56
SPIN3-222ENST00000639482 SMARCE1Q969G3 411 aa11.53□□□□□ -0.56
SPIN3-222ENST00000639482 TJP1Q07157 1748 aa11.53□□□□□ -0.56
SPIN3-222ENST00000639482 DHX16O60231 1041 aaKnown RBP11.52□□□□□ -0.56
SPIN3-222ENST00000639482 LONRF3Q496Y0 759 aa11.52□□□□□ -0.56
SPIN3-222ENST00000639482 C3orf67Q6ZVT6 689 aa11.52□□□□□ -0.56
SPIN3-222ENST00000639482 ZKSCAN3Q9BRR0 538 aa11.52□□□□□ -0.56
SPIN3-222ENST00000639482 PPP2R2CQ9Y2T4 447 aa11.52□□□□□ -0.56
SPIN3-222ENST00000639482 B4E1Z4 1266 aa11.52□□□□□ -0.57
SPIN3-222ENST00000639482 CDC27P30260 824 aa11.52□□□□□ -0.57
SPIN3-222ENST00000639482 PHKA1P46020 1223 aa11.52□□□□□ -0.57
SPIN3-222ENST00000639482 METAP2P50579 478 aaKnown RBP eCLIP11.52□□□□□ -0.57
SPIN3-222ENST00000639482 KIF23Q02241 960 aaPredicted RBP11.52□□□□□ -0.57
SPIN3-222ENST00000639482 PDE4BQ07343 736 aa11.52□□□□□ -0.57
SPIN3-222ENST00000639482 TRIM29Q14134 588 aa11.52□□□□□ -0.57
SPIN3-222ENST00000639482 ZNF274Q96GC6 653 aaPredicted RBP11.52□□□□□ -0.57
SPIN3-222ENST00000639482 BAG1Q99933 345 aaPredicted RBP11.52□□□□□ -0.57
SPIN3-222ENST00000639482 DSCC1Q9BVC3 393 aa11.52□□□□□ -0.57
SPIN3-222ENST00000639482 L2HGDHQ9H9P8 463 aa11.52□□□□□ -0.57
SPIN3-222ENST00000639482 SRP68Q9UHB9 627 aaKnown RBP11.52□□□□□ -0.57
SPIN3-222ENST00000639482 PALLDQ8WX93 1383 aa11.52□□□□□ -0.57
SPIN3-222ENST00000639482 A0A0U1RQJ8 604 aa11.52□□□□□ -0.57
SPIN3-222ENST00000639482 PSDA5PKW4 1024 aaPredicted RBP11.52□□□□□ -0.57
SPIN3-222ENST00000639482 SASH3O75995 380 aa11.52□□□□□ -0.57
SPIN3-222ENST00000639482 MCAMP43121 646 aa11.52□□□□□ -0.57
SPIN3-222ENST00000639482 PPP2R3AQ06190 1150 aa11.52□□□□□ -0.57
SPIN3-222ENST00000639482 KRT40Q6A162 431 aa11.52□□□□□ -0.57
SPIN3-222ENST00000639482 C10orf67Q8IYJ2 551 aa11.52□□□□□ -0.57
SPIN3-222ENST00000639482 NKX2-3Q8TAU0 364 aa11.52□□□□□ -0.57
SPIN3-222ENST00000639482 ATRIPQ8WXE1 791 aa11.52□□□□□ -0.57
SPIN3-222ENST00000639482 SLC26A6Q9BXS9 759 aa11.52□□□□□ -0.57
SPIN3-222ENST00000639482 ANKRD18BA2A2Z9 1011 aa11.51□□□□□ -0.57
SPIN3-222ENST00000639482 ANKRD65E5RJM6 399 aa11.51□□□□□ -0.57
SPIN3-222ENST00000639482 CASP1P29466 404 aa11.51□□□□□ -0.57
SPIN3-222ENST00000639482 EIF5P55010 431 aaKnown RBP11.51□□□□□ -0.57
SPIN3-222ENST00000639482 CCDC158Q5M9N0 1113 aa11.51□□□□□ -0.57
SPIN3-222ENST00000639482 DHX58Q96C10 678 aa11.51□□□□□ -0.57
SPIN3-222ENST00000639482 HELLSQ9NRZ9 838 aa11.51□□□□□ -0.57
SPIN3-222ENST00000639482 KCNJ14Q9UNX9 436 aa11.51□□□□□ -0.57
SPIN3-222ENST00000639482 NFE2L3Q9Y4A8 694 aa11.51□□□□□ -0.57
SPIN3-222ENST00000639482 NUP188Q5SRE5 1749 aa11.51□□□□□ -0.57
SPIN3-222ENST00000639482 RHOXF2BP0C7M4 288 aa11.51□□□□□ -0.57
SPIN3-222ENST00000639482 AFMP43652 599 aa11.51□□□□□ -0.57
SPIN3-222ENST00000639482 SMC1AQ14683 1233 aaKnown RBP11.51□□□□□ -0.57
SPIN3-222ENST00000639482 SHC4Q6S5L8 630 aa11.51□□□□□ -0.57
SPIN3-222ENST00000639482 LINC00116Q8NCU8 138 aa11.51□□□□□ -0.57
SPIN3-222ENST00000639482 NCOA7Q8NI08 942 aa11.51□□□□□ -0.57
SPIN3-222ENST00000639482 STAMQ92783 540 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms