RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 NME2P22392 152 aa7.05□□□□□ -1.28
CCDC7-211ENST00000638889 ERVK-24P63145 666 aa7.05□□□□□ -1.28
CCDC7-211ENST00000638889 ZNF792Q3KQV3 632 aa7.05□□□□□ -1.28
CCDC7-211ENST00000638889 ZC3H12AQ5D1E8 599 aaKnown RBP7.05□□□□□ -1.28
CCDC7-211ENST00000638889 PLD6Q8N2A8 252 aaKnown RBP7.05□□□□□ -1.28
CCDC7-211ENST00000638889 GNEQ9Y223 722 aaKnown RBP7.05□□□□□ -1.28
CCDC7-211ENST00000638889 HCLS1P14317 486 aaPredicted RBP7.04□□□□□ -1.28
CCDC7-211ENST00000638889 FUT4P22083 530 aa7.04□□□□□ -1.28
CCDC7-211ENST00000638889 IFI16Q16666 785 aaKnown RBP7.04□□□□□ -1.28
CCDC7-211ENST00000638889 PI16Q6UXB8 463 aa7.04□□□□□ -1.28
CCDC7-211ENST00000638889 RNF214Q8ND24 703 aa7.04□□□□□ -1.28
CCDC7-211ENST00000638889 DUSP23Q9BVJ7 150 aa7.04□□□□□ -1.28
CCDC7-211ENST00000638889 PLCB3Q01970 1234 aa7.03□□□□□ -1.28
CCDC7-211ENST00000638889 ZNF252P-AS1Q0IIN9 211 aa7.03□□□□□ -1.28
CCDC7-211ENST00000638889 BNIP3Q12983 259 aa7.03□□□□□ -1.28
CCDC7-211ENST00000638889 DSC3Q14574 896 aa7.03□□□□□ -1.28
CCDC7-211ENST00000638889 ATG4DQ86TL0 474 aaPredicted RBP7.03□□□□□ -1.28
CCDC7-211ENST00000638889 FAM181AQ8N9Y4 354 aa7.03□□□□□ -1.28
CCDC7-211ENST00000638889 ISL2Q96A47 359 aa7.03□□□□□ -1.28
CCDC7-211ENST00000638889 SSU72Q9NP77 194 aaKnown RBP7.03□□□□□ -1.28
CCDC7-211ENST00000638889 CACNA2D2Q9NY47 1150 aa7.03□□□□□ -1.28
CCDC7-211ENST00000638889 AKAP2Q9Y2D5 859 aa7.03□□□□□ -1.28
CCDC7-211ENST00000638889 TMEM265A0A087WTH1 108 aa7.02□□□□□ -1.29
CCDC7-211ENST00000638889 TREHO43280 583 aa7.02□□□□□ -1.29
CCDC7-211ENST00000638889 CEACAM5P06731 702 aa7.02□□□□□ -1.29
CCDC7-211ENST00000638889 NEFMP07197 916 aa7.02□□□□□ -1.29
CCDC7-211ENST00000638889 CD8BP10966 210 aa7.02□□□□□ -1.29
CCDC7-211ENST00000638889 OXCT1P55809 520 aa7.02□□□□□ -1.29
CCDC7-211ENST00000638889 ENOX2Q16206 610 aaKnown RBP7.02□□□□□ -1.29
CCDC7-211ENST00000638889 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.02□□□□□ -1.29
CCDC7-211ENST00000638889 NXPE4Q6UWF7 544 aa7.02□□□□□ -1.29
CCDC7-211ENST00000638889 ARHGAP27Q6ZUM4 889 aa7.02□□□□□ -1.29
CCDC7-211ENST00000638889 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.02□□□□□ -1.29
CCDC7-211ENST00000638889 STK35Q8TDR2 534 aa7.02□□□□□ -1.29
CCDC7-211ENST00000638889 HRASLS5Q96KN8 279 aa7.02□□□□□ -1.29
CCDC7-211ENST00000638889 SRCIN1Q9C0H9 1055 aa7.02□□□□□ -1.29
CCDC7-211ENST00000638889 PNMA6FA0A0J9YX94 578 aa7.01□□□□□ -1.29
CCDC7-211ENST00000638889 LEFTY1O75610 366 aa7.01□□□□□ -1.29
CCDC7-211ENST00000638889 C8AP07357 584 aa7.01□□□□□ -1.29
CCDC7-211ENST00000638889 MAP1SQ66K74 1059 aaPredicted RBP7.01□□□□□ -1.29
CCDC7-211ENST00000638889 ERICH6Q7L0X2 663 aa7.01□□□□□ -1.29
CCDC7-211ENST00000638889 GPBAR1Q8TDU6 330 aa7.01□□□□□ -1.29
CCDC7-211ENST00000638889 CEP44Q9C0F1 390 aa7.01□□□□□ -1.29
CCDC7-211ENST00000638889 BIN2Q9UBW5 565 aaPredicted RBP7.01□□□□□ -1.29
CCDC7-211ENST00000638889 SAMM50Q9Y512 469 aa7.01□□□□□ -1.29
CCDC7-211ENST00000638889 SNX11Q9Y5W9 270 aa7.01□□□□□ -1.29
CCDC7-211ENST00000638889 GSTT1P30711 240 aa7□□□□□ -1.29
CCDC7-211ENST00000638889 JAG1P78504 1218 aa7□□□□□ -1.29
CCDC7-211ENST00000638889 AOC3Q16853 763 aa7□□□□□ -1.29
CCDC7-211ENST00000638889 SCARA3Q6AZY7 606 aa7□□□□□ -1.29
CCDC7-211ENST00000638889 C3orf58Q8NDZ4 430 aa7□□□□□ -1.29
CCDC7-211ENST00000638889 PI4K2BQ8TCG2 481 aa7□□□□□ -1.29
CCDC7-211ENST00000638889 FBF1Q8TES7 1133 aa7□□□□□ -1.29
CCDC7-211ENST00000638889 NECAB3Q96P71 396 aaPredicted RBP7□□□□□ -1.29
CCDC7-211ENST00000638889 ARID3AQ99856 593 aa7□□□□□ -1.29
CCDC7-211ENST00000638889 TNKS2Q9H2K2 1166 aa7□□□□□ -1.29
CCDC7-211ENST00000638889 RC3H2Q9HBD1 1191 aaKnown RBP7□□□□□ -1.29
CCDC7-211ENST00000638889 PPM1HQ9ULR3 514 aa7□□□□□ -1.29
CCDC7-211ENST00000638889 IGF2BP3O00425 579 aaKnown RBP eCLIP6.99□□□□□ -1.29
CCDC7-211ENST00000638889 BRD1O95696 1058 aa6.99□□□□□ -1.29
CCDC7-211ENST00000638889 RNASE1P07998 156 aaKnown RBP6.99□□□□□ -1.29
CCDC7-211ENST00000638889 TOP6BLQ8N6T0 577 aa6.99□□□□□ -1.29
CCDC7-211ENST00000638889 ANKRD24Q8TF21 1146 aa6.99□□□□□ -1.29
CCDC7-211ENST00000638889 ACSBG1Q96GR2 724 aa6.99□□□□□ -1.29
CCDC7-211ENST00000638889 CBX8Q9HC52 389 aa6.99□□□□□ -1.29
CCDC7-211ENST00000638889 MBNL3Q9NUK0 354 aaKnown RBP6.99□□□□□ -1.29
CCDC7-211ENST00000638889 GTF2IRD1Q9UHL9 959 aa6.99□□□□□ -1.29
CCDC7-211ENST00000638889 PLAGL2Q9UPG8 496 aa6.99□□□□□ -1.29
CCDC7-211ENST00000638889 U3KQE9 123 aa6.99□□□□□ -1.29
CCDC7-211ENST00000638889 GIPC1O14908 333 aa6.98□□□□□ -1.29
CCDC7-211ENST00000638889 TRIM37O94972 964 aa6.98□□□□□ -1.29
CCDC7-211ENST00000638889 MAPK1P28482 360 aa6.98□□□□□ -1.29
CCDC7-211ENST00000638889 ANGEL2Q5VTE6 544 aaKnown RBP6.98□□□□□ -1.29
CCDC7-211ENST00000638889 FAM214BQ7L5A3 538 aa6.98□□□□□ -1.29
CCDC7-211ENST00000638889 CARMIL2Q6F5E8 1435 aa6.98□□□□□ -1.29
CCDC7-211ENST00000638889 ENC1O14682 589 aa6.97□□□□□ -1.29
CCDC7-211ENST00000638889 FANCGO15287 622 aa6.97□□□□□ -1.29
CCDC7-211ENST00000638889 BMP6P22004 513 aa6.97□□□□□ -1.29
CCDC7-211ENST00000638889 RING1Q06587 406 aa6.97□□□□□ -1.29
CCDC7-211ENST00000638889 LRRC14Q15048 493 aa6.97□□□□□ -1.29
CCDC7-211ENST00000638889 SLC23A3Q6PIS1 610 aa6.97□□□□□ -1.29
CCDC7-211ENST00000638889 TMEM40Q8WWA1 233 aa6.97□□□□□ -1.29
CCDC7-211ENST00000638889 PRDM10Q9NQV6 1147 aa6.97□□□□□ -1.29
CCDC7-211ENST00000638889 ADAMTS6Q9UKP5 1117 aa6.97□□□□□ -1.29
CCDC7-211ENST00000638889 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.97□□□□□ -1.29
CCDC7-211ENST00000638889 NTF4P34130 210 aa6.96□□□□□ -1.3
CCDC7-211ENST00000638889 PPM1JQ5JR12 505 aa6.96□□□□□ -1.3
CCDC7-211ENST00000638889 KCT2Q8NC54 265 aa6.96□□□□□ -1.3
CCDC7-211ENST00000638889 ASB11Q8WXH4 323 aa6.96□□□□□ -1.3
CCDC7-211ENST00000638889 FAM168AQ92567 244 aa6.96□□□□□ -1.3
CCDC7-211ENST00000638889 HEXIM2Q96MH2 286 aaKnown RBP6.96□□□□□ -1.3
CCDC7-211ENST00000638889 CD96P40200 585 aa6.95□□□□□ -1.3
CCDC7-211ENST00000638889 TPTE2Q6XPS3 522 aa6.95□□□□□ -1.3
CCDC7-211ENST00000638889 ZSCAN29Q8IWY8 852 aaPredicted RBP6.95□□□□□ -1.3
CCDC7-211ENST00000638889 LRRN4CLQ8ND94 238 aa6.95□□□□□ -1.3
CCDC7-211ENST00000638889 GRIN3AQ8TCU5 1115 aa6.95□□□□□ -1.3
CCDC7-211ENST00000638889 CYP8B1Q9UNU6 501 aa6.95□□□□□ -1.3
CCDC7-211ENST00000638889 FARP2O94887 1054 aaPredicted RBP6.94□□□□□ -1.3
CCDC7-211ENST00000638889 ITIH2P19823 946 aa6.94□□□□□ -1.3
CCDC7-211ENST00000638889 FMR1Q06787 632 aaKnown RBP eCLIP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms