RNA–Protein interactions for RNA: ENST00000637381.1

CTSD-210, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 374 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-210ENST00000637381 NSUN4Q96CB9 384 aaKnown RBP15.71■□□□□ 0.11
CTSD-210ENST00000637381 EFCC1Q9HA90 598 aa15.71■□□□□ 0.11
CTSD-210ENST00000637381 NOP58Q9Y2X3 529 aaKnown RBP15.71■□□□□ 0.11
CTSD-210ENST00000637381 PHIPQ8WWQ0 1821 aa15.71■□□□□ 0.1
CTSD-210ENST00000637381 ZBED9Q6R2W3 1325 aa15.7■□□□□ 0.1
CTSD-210ENST00000637381 RLBP1P12271 317 aa15.7■□□□□ 0.1
CTSD-210ENST00000637381 MCAMP43121 646 aa15.7■□□□□ 0.1
CTSD-210ENST00000637381 PI16Q6UXB8 463 aa15.7■□□□□ 0.1
CTSD-210ENST00000637381 ARMC5Q96C12 935 aa15.7■□□□□ 0.1
CTSD-210ENST00000637381 DDX4Q9NQI0 724 aaKnown RBP15.7■□□□□ 0.1
CTSD-210ENST00000637381 DDTLA6NHG4 134 aaPredicted RBP15.69■□□□□ 0.1
CTSD-210ENST00000637381 CXCL11O14625 94 aa15.69■□□□□ 0.1
CTSD-210ENST00000637381 UQCRFS1P1P0C7P4 283 aa15.69■□□□□ 0.1
CTSD-210ENST00000637381 BTDP43251 543 aa15.69■□□□□ 0.1
CTSD-210ENST00000637381 GSTO1P78417 241 aa15.69■□□□□ 0.1
CTSD-210ENST00000637381 ARHGEF6Q15052 776 aa15.69■□□□□ 0.1
CTSD-210ENST00000637381 GORABQ5T7V8 394 aa15.69■□□□□ 0.1
CTSD-210ENST00000637381 ANKRD23Q86SG2 305 aa15.69■□□□□ 0.1
CTSD-210ENST00000637381 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.69■□□□□ 0.1
CTSD-210ENST00000637381 ZNF512BQ96KM6 892 aaPredicted RBP15.69■□□□□ 0.1
CTSD-210ENST00000637381 COL2A1P02458 1487 aaPredicted RBP15.68■□□□□ 0.1
CTSD-210ENST00000637381 TBC1D12O60347 775 aa15.68■□□□□ 0.1
CTSD-210ENST00000637381 IGSF3O75054 1194 aa15.68■□□□□ 0.1
CTSD-210ENST00000637381 LDHCP07864 332 aa15.68■□□□□ 0.1
CTSD-210ENST00000637381 TNNI3KQ59H18 835 aa15.68■□□□□ 0.1
CTSD-210ENST00000637381 C17orf99Q6UX52 265 aa15.68■□□□□ 0.1
CTSD-210ENST00000637381 TBC1D9Q6ZT07 1266 aa15.68■□□□□ 0.1
CTSD-210ENST00000637381 FPGT-TNNI3KV9GXZ4 949 aa15.68■□□□□ 0.1
CTSD-210ENST00000637381 PTPRFP10586 1907 aa15.68■□□□□ 0.1
CTSD-210ENST00000637381 ADGRA2Q96PE1 1338 aa15.68■□□□□ 0.1
CTSD-210ENST00000637381 DOCK1Q14185 1865 aa15.67■□□□□ 0.1
CTSD-210ENST00000637381 MYO5AQ9Y4I1 1855 aaKnown RBP15.67■□□□□ 0.1
CTSD-210ENST00000637381 CTNND1O60716 968 aaKnown RBP15.67■□□□□ 0.1
CTSD-210ENST00000637381 FTSJ3Q8IY81 847 aaKnown RBP15.67■□□□□ 0.1
CTSD-210ENST00000637381 SCYL3Q8IZE3 742 aa15.67■□□□□ 0.1
CTSD-210ENST00000637381 BRCA2P51587 3418 aa15.66■□□□□ 0.1
CTSD-210ENST00000637381 ZSWIM8A7E2V4 1837 aa15.66■□□□□ 0.1
CTSD-210ENST00000637381 CDK5RAP2Q96SN8 1893 aa15.66■□□□□ 0.1
CTSD-210ENST00000637381 SURF6O75683 361 aaKnown RBP15.66■□□□□ 0.1
CTSD-210ENST00000637381 GNRH1P01148 92 aa15.66■□□□□ 0.1
CTSD-210ENST00000637381 PTPRAP18433 802 aa15.66■□□□□ 0.1
CTSD-210ENST00000637381 LACTBP83111 547 aaPredicted RBP15.66■□□□□ 0.1
CTSD-210ENST00000637381 GPAT2Q6NUI2 795 aa15.66■□□□□ 0.1
CTSD-210ENST00000637381 AFG3L2Q9Y4W6 797 aa15.66■□□□□ 0.1
CTSD-210ENST00000637381 MAST2Q6P0Q8 1798 aa15.66■□□□□ 0.1
CTSD-210ENST00000637381 PDE4DIPQ5VU43 2346 aa15.66■□□□□ 0.1
CTSD-210ENST00000637381 FOCADQ5VW36 1801 aa15.66■□□□□ 0.1
CTSD-210ENST00000637381 A0A0G2JLL6 359 aaPredicted RBP15.65■□□□□ 0.1
CTSD-210ENST00000637381 PDHXO00330 501 aa15.65■□□□□ 0.1
CTSD-210ENST00000637381 PPP4CP60510 307 aa15.65■□□□□ 0.1
CTSD-210ENST00000637381 PRRT2Q7Z6L0 340 aaPredicted RBP15.65■□□□□ 0.1
CTSD-210ENST00000637381 ITPRIPQ8IWB1 547 aa15.65■□□□□ 0.1
CTSD-210ENST00000637381 ZSCAN29Q8IWY8 852 aaPredicted RBP15.65■□□□□ 0.1
CTSD-210ENST00000637381 DBNDD2Q9BQY9 259 aa15.65■□□□□ 0.1
CTSD-210ENST00000637381 MKI67P46013 3256 aaKnown RBP15.65■□□□□ 0.1
CTSD-210ENST00000637381 CYP2E1P05181 493 aaPredicted RBP15.64■□□□□ 0.09
CTSD-210ENST00000637381 SLURP2P0DP57 97 aa15.64■□□□□ 0.09
CTSD-210ENST00000637381 PICALMQ13492 652 aa15.64■□□□□ 0.09
CTSD-210ENST00000637381 CCDC158Q5M9N0 1113 aa15.64■□□□□ 0.09
CTSD-210ENST00000637381 C1orf115Q9H7X2 142 aa15.64■□□□□ 0.09
CTSD-210ENST00000637381 PICK1Q9NRD5 415 aa15.64■□□□□ 0.09
CTSD-210ENST00000637381 RAI14Q9P0K7 980 aa15.64■□□□□ 0.09
CTSD-210ENST00000637381 LRP2BPQ9P2M1 347 aa15.64■□□□□ 0.09
CTSD-210ENST00000637381 ZHX2Q9Y6X8 837 aa15.64■□□□□ 0.09
CTSD-210ENST00000637381 MGAMO43451 1857 aa15.63■□□□□ 0.09
CTSD-210ENST00000637381 POTEFA5A3E0 1075 aa15.63■□□□□ 0.09
CTSD-210ENST00000637381 PRMT2P55345 433 aa15.63■□□□□ 0.09
CTSD-210ENST00000637381 KIF22Q14807 665 aa15.63■□□□□ 0.09
CTSD-210ENST00000637381 TTC39AQ5SRH9 613 aa15.63■□□□□ 0.09
CTSD-210ENST00000637381 CEP85Q6P2H3 762 aa15.63■□□□□ 0.09
CTSD-210ENST00000637381 FASTKD5Q7L8L6 764 aaKnown RBP15.63■□□□□ 0.09
CTSD-210ENST00000637381 EAF2Q96CJ1 260 aaPredicted RBP15.63■□□□□ 0.09
CTSD-210ENST00000637381 ZNF333Q96JL9 665 aa15.63■□□□□ 0.09
CTSD-210ENST00000637381 ARHGAP39Q9C0H5 1083 aa15.63■□□□□ 0.09
CTSD-210ENST00000637381 OSBPL5Q9H0X9 879 aaPredicted RBP15.63■□□□□ 0.09
CTSD-210ENST00000637381 DBNLQ9UJU6 430 aaKnown RBP15.63■□□□□ 0.09
CTSD-210ENST00000637381 SLC45A1Q9Y2W3 748 aa15.63■□□□□ 0.09
CTSD-210ENST00000637381 PTCH2Q9Y6C5 1203 aa15.63■□□□□ 0.09
CTSD-210ENST00000637381 SIPA1L1O43166 1804 aa15.63■□□□□ 0.09
CTSD-210ENST00000637381 ATAD5Q96QE3 1844 aa15.63■□□□□ 0.09
CTSD-210ENST00000637381 BCRP11274 1271 aa15.62■□□□□ 0.09
CTSD-210ENST00000637381 CTGFP29279 349 aa15.62■□□□□ 0.09
CTSD-210ENST00000637381 OS9Q13438 667 aaPredicted RBP15.62■□□□□ 0.09
CTSD-210ENST00000637381 NBPF11Q86T75 865 aa15.62■□□□□ 0.09
CTSD-210ENST00000637381 METTL16Q86W50 562 aaKnown RBP15.62■□□□□ 0.09
CTSD-210ENST00000637381 SNRKQ9NRH2 765 aa15.62■□□□□ 0.09
CTSD-210ENST00000637381 NAA16Q6N069 864 aaPredicted RBP15.61■□□□□ 0.09
CTSD-210ENST00000637381 PANK1Q8TE04 598 aa15.61■□□□□ 0.09
CTSD-210ENST00000637381 SH3RF3Q8TEJ3 882 aaPredicted RBP15.61■□□□□ 0.09
CTSD-210ENST00000637381 TRIM47Q96LD4 638 aa15.61■□□□□ 0.09
CTSD-210ENST00000637381 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.61■□□□□ 0.093e-9■■■■□ 25.5
CTSD-210ENST00000637381 CPA4Q9UI42 421 aa15.61■□□□□ 0.09
CTSD-210ENST00000637381 BAG3O95817 575 aa15.6■□□□□ 0.09
CTSD-210ENST00000637381 MS4A1P11836 297 aa15.6■□□□□ 0.09
CTSD-210ENST00000637381 PLCG2P16885 1265 aa15.6■□□□□ 0.09
CTSD-210ENST00000637381 ZAP70P43403 619 aa15.6■□□□□ 0.09
CTSD-210ENST00000637381 SLC9C1Q4G0N8 1177 aa15.6■□□□□ 0.09
CTSD-210ENST00000637381 PRPF38BQ5VTL8 546 aaKnown RBP15.6■□□□□ 0.09
CTSD-210ENST00000637381 ADGRA1Q86SQ6 560 aa15.6■□□□□ 0.09
CTSD-210ENST00000637381 TEX11Q8IYF3 940 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms