RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 SLC27A2O14975 620 aa12.74□□□□□ -0.37
CLN5-213ENST00000636681 CPA1P15085 419 aa12.74□□□□□ -0.37
CLN5-213ENST00000636681 ADCK5Q3MIX3 580 aa12.74□□□□□ -0.37
CLN5-213ENST00000636681 STOX1Q6ZVD7 989 aa12.74□□□□□ -0.37
CLN5-213ENST00000636681 ZNF526Q8TF50 670 aaPredicted RBP12.74□□□□□ -0.37
CLN5-213ENST00000636681 TBC1D32Q96NH3 1257 aa12.74□□□□□ -0.37
CLN5-213ENST00000636681 MRIQ9BWK5 157 aa12.74□□□□□ -0.37
CLN5-213ENST00000636681 ZNF70Q9UC06 446 aaPredicted RBP12.74□□□□□ -0.37
CLN5-213ENST00000636681 GLTPD2A6NH11 291 aa12.73□□□□□ -0.37
CLN5-213ENST00000636681 MINDY4BA8MYZ0 360 aa12.73□□□□□ -0.37
CLN5-213ENST00000636681 USP17L12C9JPN9 530 aa12.73□□□□□ -0.37
CLN5-213ENST00000636681 USP17L21D6R901 530 aa12.73□□□□□ -0.37
CLN5-213ENST00000636681 HSPA4P34932 840 aa12.73□□□□□ -0.37
CLN5-213ENST00000636681 TDO2P48775 406 aa12.73□□□□□ -0.37
CLN5-213ENST00000636681 KIF4BQ2VIQ3 1234 aa12.73□□□□□ -0.37
CLN5-213ENST00000636681 CTR9Q6PD62 1173 aa12.73□□□□□ -0.37
CLN5-213ENST00000636681 TBC1D10CQ8IV04 446 aa12.73□□□□□ -0.37
CLN5-213ENST00000636681 VEZTQ9HBM0 779 aa12.73□□□□□ -0.37
CLN5-213ENST00000636681 SNX14Q9Y5W7 946 aa12.73□□□□□ -0.37
CLN5-213ENST00000636681 SCN4AP35499 1836 aa12.73□□□□□ -0.37
CLN5-213ENST00000636681 WDR90Q96KV7 1748 aa12.73□□□□□ -0.37
CLN5-213ENST00000636681 CNTNAP1P78357 1384 aa12.72□□□□□ -0.37
CLN5-213ENST00000636681 POTEIP0CG38 1075 aa12.72□□□□□ -0.37
CLN5-213ENST00000636681 POTEJP0CG39 1038 aa12.72□□□□□ -0.37
CLN5-213ENST00000636681 PLCD1P51178 756 aa12.72□□□□□ -0.37
CLN5-213ENST00000636681 SH3BP5LQ7L8J4 393 aa12.72□□□□□ -0.37
CLN5-213ENST00000636681 DYNLL2Q96FJ2 89 aa12.72□□□□□ -0.37
CLN5-213ENST00000636681 NAPBQ9H115 298 aa12.72□□□□□ -0.37
CLN5-213ENST00000636681 MCM9Q9NXL9 1143 aa12.72□□□□□ -0.37
CLN5-213ENST00000636681 RPAP1Q9BWH6 1393 aaPredicted RBP12.72□□□□□ -0.37
CLN5-213ENST00000636681 DDTLA6NHG4 134 aaPredicted RBP12.71□□□□□ -0.37
CLN5-213ENST00000636681 FAM196BA6NMK8 535 aa12.71□□□□□ -0.37
CLN5-213ENST00000636681 H7C1D1 291 aa12.71□□□□□ -0.37
CLN5-213ENST00000636681 SPDYE2Q495Y8 402 aa12.71□□□□□ -0.37
CLN5-213ENST00000636681 PRAMEF18Q5VWM3 479 aa12.71□□□□□ -0.37
CLN5-213ENST00000636681 DPY19L2Q6NUT2 758 aa12.71□□□□□ -0.37
CLN5-213ENST00000636681 MTMR14Q8NCE2 650 aa12.71□□□□□ -0.37
CLN5-213ENST00000636681 U3KPZ7 1027 aaPredicted RBP12.71□□□□□ -0.37
CLN5-213ENST00000636681 GNAT2P19087 354 aa12.71□□□□□ -0.38
CLN5-213ENST00000636681 ALX1Q15699 326 aa12.71□□□□□ -0.38
CLN5-213ENST00000636681 SLC44A5Q8NCS7 719 aa12.71□□□□□ -0.38
CLN5-213ENST00000636681 HACL1Q9UJ83 578 aa12.71□□□□□ -0.38
CLN5-213ENST00000636681 PRDM1O75626 825 aa12.7□□□□□ -0.38
CLN5-213ENST00000636681 RBM25P49756 843 aaKnown RBP12.7□□□□□ -0.38
CLN5-213ENST00000636681 ANGEL2Q5VTE6 544 aaKnown RBP12.7□□□□□ -0.38
CLN5-213ENST00000636681 L3MBTL3Q96JM7 780 aaPredicted RBP12.7□□□□□ -0.38
CLN5-213ENST00000636681 TCEANC2Q96MN5 208 aa12.7□□□□□ -0.38
CLN5-213ENST00000636681 TMEM39BQ9GZU3 492 aa12.7□□□□□ -0.38
CLN5-213ENST00000636681 ATP8A2Q9NTI2 1148 aa12.7□□□□□ -0.38
CLN5-213ENST00000636681 E7EWF7 191 aa12.69□□□□□ -0.38
CLN5-213ENST00000636681 IGSF3O75054 1194 aa12.69□□□□□ -0.38
CLN5-213ENST00000636681 PLCG2P16885 1265 aa12.69□□□□□ -0.38
CLN5-213ENST00000636681 LMOD1P29536 600 aaPredicted RBP12.69□□□□□ -0.38
CLN5-213ENST00000636681 PPARAQ07869 468 aa12.69□□□□□ -0.38
CLN5-213ENST00000636681 TMED8Q6PL24 325 aaPredicted RBP12.69□□□□□ -0.38
CLN5-213ENST00000636681 IDI2Q9BXS1 227 aa12.69□□□□□ -0.38
CLN5-213ENST00000636681 UPF3BQ9BZI7 483 aaKnown RBP12.69□□□□□ -0.38
CLN5-213ENST00000636681 OSBPL5Q9H0X9 879 aaPredicted RBP12.69□□□□□ -0.38
CLN5-213ENST00000636681 RRAGCQ9HB90 399 aa12.69□□□□□ -0.38
CLN5-213ENST00000636681 NMRK2Q9NPI5 230 aa12.69□□□□□ -0.38
CLN5-213ENST00000636681 NEDD4P46934 1319 aa12.69□□□□□ -0.38
CLN5-213ENST00000636681 ZNF213O14771 459 aa12.69□□□□□ -0.38
CLN5-213ENST00000636681 EPHX2P34913 555 aa12.69□□□□□ -0.38
CLN5-213ENST00000636681 SHROOM1Q2M3G4 852 aaPredicted RBP12.69□□□□□ -0.38
CLN5-213ENST00000636681 C12orf60Q5U649 245 aa12.69□□□□□ -0.38
CLN5-213ENST00000636681 CHST3Q7LGC8 479 aa12.69□□□□□ -0.38
CLN5-213ENST00000636681 KCNB2Q92953 911 aa12.69□□□□□ -0.38
CLN5-213ENST00000636681 UPF2Q9HAU5 1272 aaKnown RBP12.69□□□□□ -0.38
CLN5-213ENST00000636681 GGA3Q9NZ52 723 aa12.69□□□□□ -0.38
CLN5-213ENST00000636681 FZD1Q9UP38 647 aa12.69□□□□□ -0.38
CLN5-213ENST00000636681 DCAF8L1A6NGE4 600 aa12.68□□□□□ -0.38
CLN5-213ENST00000636681 POLR3DP05423 398 aaPredicted RBP12.68□□□□□ -0.38
CLN5-213ENST00000636681 IMMTQ16891 758 aaKnown RBP12.68□□□□□ -0.38
CLN5-213ENST00000636681 EAPPQ56P03 285 aaPredicted RBP12.68□□□□□ -0.38
CLN5-213ENST00000636681 JAKMIP1Q96N16 626 aaKnown RBP12.68□□□□□ -0.38
CLN5-213ENST00000636681 LARP6Q9BRS8 491 aaKnown RBP12.68□□□□□ -0.38
CLN5-213ENST00000636681 NACAP1Q9BZK3 213 aa12.68□□□□□ -0.38
CLN5-213ENST00000636681 TAF1DQ9H5J8 278 aaPredicted RBP12.68□□□□□ -0.38
CLN5-213ENST00000636681 ADARB2Q9NS39 739 aaKnown RBP12.68□□□□□ -0.38
CLN5-213ENST00000636681 PGAP2Q9UHJ9 254 aa12.68□□□□□ -0.38
CLN5-213ENST00000636681 ZC3H4Q9UPT8 1303 aaKnown RBP12.68□□□□□ -0.38
CLN5-213ENST00000636681 CD2BP2O95400 341 aaKnown RBP12.67□□□□□ -0.38
CLN5-213ENST00000636681 FMR1Q06787 632 aaKnown RBP eCLIP12.67□□□□□ -0.38
CLN5-213ENST00000636681 RASA3Q14644 834 aa12.67□□□□□ -0.38
CLN5-213ENST00000636681 GIMAP6Q6P9H5 292 aa12.67□□□□□ -0.38
CLN5-213ENST00000636681 ZSCAN29Q8IWY8 852 aaPredicted RBP12.67□□□□□ -0.38
CLN5-213ENST00000636681 LRRC2Q9BYS8 371 aa12.67□□□□□ -0.38
CLN5-213ENST00000636681 DNAJC18Q9H819 358 aa12.67□□□□□ -0.38
CLN5-213ENST00000636681 GPHNQ9NQX3 736 aaPredicted RBP12.67□□□□□ -0.38
CLN5-213ENST00000636681 RBM19Q9Y4C8 960 aaKnown RBP12.67□□□□□ -0.38
CLN5-213ENST00000636681 ZMYM6O95789 1325 aa12.67□□□□□ -0.38
CLN5-213ENST00000636681 B4E1Z4 1266 aa12.66□□□□□ -0.38
CLN5-213ENST00000636681 ADM5C9JUS6 153 aa12.66□□□□□ -0.38
CLN5-213ENST00000636681 SBK1Q52WX2 424 aa12.66□□□□□ -0.38
CLN5-213ENST00000636681 RRP12Q5JTH9 1297 aaKnown RBP12.66□□□□□ -0.38
CLN5-213ENST00000636681 CYB5R4Q7L1T6 521 aa12.66□□□□□ -0.38
CLN5-213ENST00000636681 CTNNA3Q9UI47 895 aa12.66□□□□□ -0.38
CLN5-213ENST00000636681 CASTP20810 708 aaKnown RBP12.66□□□□□ -0.38
CLN5-213ENST00000636681 MCCP23508 829 aa12.66□□□□□ -0.38
CLN5-213ENST00000636681 TEPSINQ96N21 525 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms