RNA–Protein interactions for RNA: ENST00000636010.1

SPTAN1-229, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 1,472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-229	ENST00000636010	ATRNL1	Q5VV63	1379 aa		14.04	□□□□□ -0.16
SPTAN1-229	ENST00000636010	WDR33	Q9C0J8	1336 aa	Known RBP	14.03	□□□□□ -0.16
SPTAN1-229	ENST00000636010	ZNF532	Q9HCE3	1301 aa		14.03	□□□□□ -0.16
SPTAN1-229	ENST00000636010	DDTL	A6NHG4	134 aa	Predicted RBP	14.03	□□□□□ -0.16
SPTAN1-229	ENST00000636010	FAM155A	B1AL88	458 aa	Predicted RBP	14.03	□□□□□ -0.16
SPTAN1-229	ENST00000636010	USP2	O75604	605 aa	Predicted RBP	14.03	□□□□□ -0.16
SPTAN1-229	ENST00000636010	MAP3K12	Q12852	859 aa		14.03	□□□□□ -0.16
SPTAN1-229	ENST00000636010	CLMN	Q96JQ2	1002 aa		14.03	□□□□□ -0.16
SPTAN1-229	ENST00000636010	BEGAIN	Q9BUH8	593 aa		14.03	□□□□□ -0.16
SPTAN1-229	ENST00000636010	TTC41P	Q6P2S7	1318 aa		14.02	□□□□□ -0.16
SPTAN1-229	ENST00000636010	NF2	P35240	595 aa		14.02	□□□□□ -0.16
SPTAN1-229	ENST00000636010	ECE1	P42892	770 aa		14.02	□□□□□ -0.16
SPTAN1-229	ENST00000636010	NUCB1	Q02818	461 aa		14.02	□□□□□ -0.16
SPTAN1-229	ENST00000636010	TTF1	Q15361	905 aa	Predicted RBP	14.02	□□□□□ -0.16
SPTAN1-229	ENST00000636010	SLC9C2	Q5TAH2	1124 aa		14.02	□□□□□ -0.16
SPTAN1-229	ENST00000636010	RGMB	Q6NW40	437 aa		14.02	□□□□□ -0.16
SPTAN1-229	ENST00000636010	CHD1L	Q86WJ1	897 aa		14.02	□□□□□ -0.16
SPTAN1-229	ENST00000636010	TEX11	Q8IYF3	940 aa		14.02	□□□□□ -0.16
SPTAN1-229	ENST00000636010	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	14.02	□□□□□ -0.16
SPTAN1-229	ENST00000636010	PDE4A	P27815	886 aa		14.01	□□□□□ -0.17
SPTAN1-229	ENST00000636010	ADD2	P35612	726 aa		14.01	□□□□□ -0.17
SPTAN1-229	ENST00000636010	LBX1	P52954	281 aa		14.01	□□□□□ -0.17
SPTAN1-229	ENST00000636010	PDE1A	P54750	535 aa		14.01	□□□□□ -0.17
SPTAN1-229	ENST00000636010	PPP4C	P60510	307 aa		14.01	□□□□□ -0.17
SPTAN1-229	ENST00000636010	FKBP1B	P68106	108 aa		14.01	□□□□□ -0.17
SPTAN1-229	ENST00000636010	MIGA2	Q7L4E1	593 aa		14.01	□□□□□ -0.17
SPTAN1-229	ENST00000636010	RASAL3	Q86YV0	1011 aa		14.01	□□□□□ -0.17
SPTAN1-229	ENST00000636010	HHIPL1	Q96JK4	782 aa		14.01	□□□□□ -0.17
SPTAN1-229	ENST00000636010	RIOK1	Q9BRS2	568 aa	Known RBP	14.01	□□□□□ -0.17
SPTAN1-229	ENST00000636010	ENTPD3	O75355	529 aa		14	□□□□□ -0.17
SPTAN1-229	ENST00000636010	ZNF157	P51786	506 aa	Predicted RBP	14	□□□□□ -0.17
SPTAN1-229	ENST00000636010	MAP3K11	Q16584	847 aa		14	□□□□□ -0.17
SPTAN1-229	ENST00000636010	SUPT20HL1	Q3ZLR7	823 aa		14	□□□□□ -0.17
SPTAN1-229	ENST00000636010	LDLRAD1	Q5T700	205 aa		14	□□□□□ -0.17
SPTAN1-229	ENST00000636010	MAPKAPK5	Q8IW41	473 aa		14	□□□□□ -0.17
SPTAN1-229	ENST00000636010	LCORL	Q8N3X6	602 aa		14	□□□□□ -0.17
SPTAN1-229	ENST00000636010	TGFBRAP1	Q8WUH2	860 aa		14	□□□□□ -0.17
SPTAN1-229	ENST00000636010	GPATCH3	Q96I76	525 aa		14	□□□□□ -0.17
SPTAN1-229	ENST00000636010	STAP2	Q9UGK3	403 aa		14	□□□□□ -0.17
SPTAN1-229	ENST00000636010	COL2A1	P02458	1487 aa	Predicted RBP	14	□□□□□ -0.17
SPTAN1-229	ENST00000636010	FLT1	P17948	1338 aa		14	□□□□□ -0.17
SPTAN1-229	ENST00000636010	FAM196B	A6NMK8	535 aa		13.99	□□□□□ -0.17
SPTAN1-229	ENST00000636010	SLC10A3	P09131	477 aa		13.99	□□□□□ -0.17
SPTAN1-229	ENST00000636010	EVX2	Q03828	476 aa		13.99	□□□□□ -0.17
SPTAN1-229	ENST00000636010	SLC4A8	Q2Y0W8	1093 aa		13.99	□□□□□ -0.17
SPTAN1-229	ENST00000636010	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.99	□□□□□ -0.17
SPTAN1-229	ENST00000636010	ARMC9	Q7Z3E5	817 aa		13.99	□□□□□ -0.17
SPTAN1-229	ENST00000636010	PLEKHM2	Q8IWE5	1019 aa		13.99	□□□□□ -0.17
SPTAN1-229	ENST00000636010	KBTBD3	Q8NAB2	608 aa		13.99	□□□□□ -0.17
SPTAN1-229	ENST00000636010	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.99	□□□□□ -0.17	2e-19	■□□□□ 11.2
SPTAN1-229	ENST00000636010	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.99	□□□□□ -0.17
SPTAN1-229	ENST00000636010	CASP8AP2	Q9UKL3	1982 aa		13.99	□□□□□ -0.17
SPTAN1-229	ENST00000636010	GLRX3	O76003	335 aa	Known RBP	13.99	□□□□□ -0.17
SPTAN1-229	ENST00000636010	BAG3	O95817	575 aa		13.99	□□□□□ -0.17
SPTAN1-229	ENST00000636010	MKRN3	Q13064	507 aa	Known RBP	13.99	□□□□□ -0.17
SPTAN1-229	ENST00000636010	SKAP1	Q86WV1	359 aa		13.99	□□□□□ -0.17
SPTAN1-229	ENST00000636010	CNKSR2	Q8WXI2	1034 aa		13.99	□□□□□ -0.17
SPTAN1-229	ENST00000636010	CSRNP1	Q96S65	589 aa		13.99	□□□□□ -0.17
SPTAN1-229	ENST00000636010	NOL10	Q9BSC4	688 aa	Known RBP	13.99	□□□□□ -0.17
SPTAN1-229	ENST00000636010	ARMT1	Q9H993	441 aa		13.99	□□□□□ -0.17
SPTAN1-229	ENST00000636010	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.99	□□□□□ -0.17
SPTAN1-229	ENST00000636010	ERC2	O15083	957 aa		13.98	□□□□□ -0.17
SPTAN1-229	ENST00000636010	PPP1R12B	O60237	982 aa	Predicted RBP	13.98	□□□□□ -0.17
SPTAN1-229	ENST00000636010	IGSF3	O75054	1194 aa		13.98	□□□□□ -0.17
SPTAN1-229	ENST00000636010	INPP5B	P32019	993 aa		13.98	□□□□□ -0.17
SPTAN1-229	ENST00000636010	GJA5	P36382	358 aa		13.98	□□□□□ -0.17
SPTAN1-229	ENST00000636010	VGLL4	Q14135	290 aa		13.98	□□□□□ -0.17
SPTAN1-229	ENST00000636010	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.98	□□□□□ -0.17
SPTAN1-229	ENST00000636010	PUS7L	Q9H0K6	701 aa	Known RBP	13.98	□□□□□ -0.17
SPTAN1-229	ENST00000636010	SAP30BP	Q9UHR5	308 aa	Known RBP	13.98	□□□□□ -0.17
SPTAN1-229	ENST00000636010	MAGEB6P1	A0A0J9YX57	407 aa		13.97	□□□□□ -0.17
SPTAN1-229	ENST00000636010	PRKAB2	O43741	272 aa		13.97	□□□□□ -0.17
SPTAN1-229	ENST00000636010	NPM3	O75607	178 aa	Known RBP	13.97	□□□□□ -0.17
SPTAN1-229	ENST00000636010	MBD4	O95243	580 aa		13.97	□□□□□ -0.17
SPTAN1-229	ENST00000636010	HSPA8	P11142	646 aa	Known RBP	13.97	□□□□□ -0.17
SPTAN1-229	ENST00000636010	SDR42E1	Q8WUS8	393 aa		13.97	□□□□□ -0.17
SPTAN1-229	ENST00000636010	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.97	□□□□□ -0.17
SPTAN1-229	ENST00000636010	WRNIP1	Q96S55	665 aa		13.97	□□□□□ -0.17
SPTAN1-229	ENST00000636010	SEC62	Q99442	399 aa	Known RBP	13.97	□□□□□ -0.17
SPTAN1-229	ENST00000636010	ELP3	Q9H9T3	547 aa		13.97	□□□□□ -0.17
SPTAN1-229	ENST00000636010	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.97	□□□□□ -0.17
SPTAN1-229	ENST00000636010	SNCAIP	Q9Y6H5	919 aa		13.97	□□□□□ -0.17
SPTAN1-229	ENST00000636010	LAMA4	Q16363	1823 aa		13.96	□□□□□ -0.17
SPTAN1-229	ENST00000636010	SMIM22	K7EJ46	135 aa		13.96	□□□□□ -0.17
SPTAN1-229	ENST00000636010	PLCG2	P16885	1265 aa		13.96	□□□□□ -0.17
SPTAN1-229	ENST00000636010	IREB2	P48200	963 aa	Known RBP	13.96	□□□□□ -0.17
SPTAN1-229	ENST00000636010	UBE3C	Q15386	1083 aa		13.96	□□□□□ -0.17
SPTAN1-229	ENST00000636010	ANKRD13A	Q8IZ07	590 aa		13.96	□□□□□ -0.17
SPTAN1-229	ENST00000636010	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.96	□□□□□ -0.17
SPTAN1-229	ENST00000636010	OSBP2	Q969R2	916 aa		13.96	□□□□□ -0.17
SPTAN1-229	ENST00000636010	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
SPTAN1-229	ENST00000636010	DNAJC18	Q9H819	358 aa		13.96	□□□□□ -0.17
SPTAN1-229	ENST00000636010	PALD1	Q9ULE6	856 aa		13.96	□□□□□ -0.17
SPTAN1-229	ENST00000636010	LOC285556	D6RIA3	1793 aa		13.96	□□□□□ -0.17
SPTAN1-229	ENST00000636010		M0R2C6	588 aa		13.95	□□□□□ -0.18
SPTAN1-229	ENST00000636010	USP5	P45974	858 aa		13.95	□□□□□ -0.18
SPTAN1-229	ENST00000636010	KIF23	Q02241	960 aa	Predicted RBP	13.95	□□□□□ -0.18
SPTAN1-229	ENST00000636010	RRP1B	Q14684	758 aa	Known RBP	13.95	□□□□□ -0.18
SPTAN1-229	ENST00000636010	WNK4	Q96J92	1243 aa		13.95	□□□□□ -0.18
SPTAN1-229	ENST00000636010	FSD1	Q9BTV5	496 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms