RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 HACL1Q9UJ83 578 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 V9GY48 417 aaPredicted RBP16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 POLR1AO95602 1720 aaPredicted RBP16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 USP17L8P0C7I0 530 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 CALM1P0DP23 149 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 CALM2P0DP24 149 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 CALM3P0DP25 149 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 MCM7P33993 719 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 SDR42E1Q8WUS8 393 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 SNX21Q969T3 373 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 PKD2L1Q9P0L9 805 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 CGNQ9P2M7 1197 aaKnown RBP16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 CARMIL3Q8ND23 1372 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 ZNF804BA4D1E1 1349 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 PLSCR1O15162 318 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 USP8P40818 1118 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 GRIPAP1Q4V328 841 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 CCDC178Q5BJE1 867 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 RC3H1Q5TC82 1133 aaKnown RBP16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 KIAA1328Q86T90 577 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 CCDC112Q8NEF3 446 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 FAM47AQ5JRC9 791 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 PI16Q6UXB8 463 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 FCHSD1Q86WN1 690 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 SPTLC2O15270 562 aa16.34■□□□□ 0.21
NEDD4L-238ENST00000635997 PHKA1P46020 1223 aa16.34■□□□□ 0.21
NEDD4L-238ENST00000635997 IREB2P48200 963 aaKnown RBP16.34■□□□□ 0.21
NEDD4L-238ENST00000635997 USP17L12C9JPN9 530 aa16.34■□□□□ 0.21
NEDD4L-238ENST00000635997 USP17L21D6R901 530 aa16.34■□□□□ 0.21
NEDD4L-238ENST00000635997 CA8P35219 290 aa16.34■□□□□ 0.21
NEDD4L-238ENST00000635997 GRAPQ13588 217 aa16.34■□□□□ 0.21
NEDD4L-238ENST00000635997 BRDTQ58F21 947 aaPredicted RBP16.34■□□□□ 0.21
NEDD4L-238ENST00000635997 GRAPLQ8TC17 118 aaPredicted RBP16.34■□□□□ 0.21
NEDD4L-238ENST00000635997 PTH1RQ03431 593 aa16.34■□□□□ 0.21
NEDD4L-238ENST00000635997 GPHNQ9NQX3 736 aaPredicted RBP16.34■□□□□ 0.21
NEDD4L-238ENST00000635997 LEMD3Q9Y2U8 911 aa16.34■□□□□ 0.21
NEDD4L-238ENST00000635997 CYP19A1P11511 503 aaPredicted RBP16.33■□□□□ 0.21
NEDD4L-238ENST00000635997 LMNB1P20700 586 aa16.33■□□□□ 0.21
NEDD4L-238ENST00000635997 ZSCAN23Q3MJ62 389 aa16.33■□□□□ 0.21
NEDD4L-238ENST00000635997 TDRD12Q587J7 1177 aaKnown RBP16.33■□□□□ 0.21
NEDD4L-238ENST00000635997 HSP90B2PQ58FF3 399 aa16.33■□□□□ 0.21
NEDD4L-238ENST00000635997 ZBTB21Q9ULJ3 1066 aa16.33■□□□□ 0.21
NEDD4L-238ENST00000635997 CTAGE5O15320 804 aa16.33■□□□□ 0.2
NEDD4L-238ENST00000635997 TMC6Q7Z403 805 aa16.33■□□□□ 0.2
NEDD4L-238ENST00000635997 CMTR1Q8N1G2 835 aaKnown RBP16.33■□□□□ 0.2
NEDD4L-238ENST00000635997 ANGEL1Q9UNK9 670 aaKnown RBP16.33■□□□□ 0.2
NEDD4L-238ENST00000635997 ADCY5O95622 1261 aa16.33■□□□□ 0.2
NEDD4L-238ENST00000635997 RPS6KB1P23443 525 aa16.33■□□□□ 0.2
NEDD4L-238ENST00000635997 CCDC40Q4G0X9 1142 aa16.33■□□□□ 0.2
NEDD4L-238ENST00000635997 CCDC181Q5TID7 509 aa16.33■□□□□ 0.2
NEDD4L-238ENST00000635997 MRPS27Q92552 414 aaKnown RBP16.33■□□□□ 0.2
NEDD4L-238ENST00000635997 PALD1Q9ULE6 856 aa16.33■□□□□ 0.2
NEDD4L-238ENST00000635997 JAK2O60674 1132 aa16.33■□□□□ 0.2
NEDD4L-238ENST00000635997 ATP5JP18859 108 aa16.33■□□□□ 0.2
NEDD4L-238ENST00000635997 AOC3Q16853 763 aa16.33■□□□□ 0.2
NEDD4L-238ENST00000635997 SUSD4Q5VX71 490 aa16.33■□□□□ 0.2
NEDD4L-238ENST00000635997 CCDC148Q8NFR7 591 aa16.33■□□□□ 0.2
NEDD4L-238ENST00000635997 ZNF830Q96NB3 372 aaPredicted RBP16.33■□□□□ 0.2
NEDD4L-238ENST00000635997 DNAJC25Q9H1X3 360 aa16.33■□□□□ 0.2
NEDD4L-238ENST00000635997 LUC7LQ9NQ29 371 aaKnown RBP16.33■□□□□ 0.2
NEDD4L-238ENST00000635997 USP17L3A6NCW0 530 aa16.32■□□□□ 0.2
NEDD4L-238ENST00000635997 USP17L4A6NCW7 530 aa16.32■□□□□ 0.2
NEDD4L-238ENST00000635997 STX17P56962 302 aa16.32■□□□□ 0.2
NEDD4L-238ENST00000635997 USP17L1Q7RTZ2 530 aa16.32■□□□□ 0.2
NEDD4L-238ENST00000635997 NUP88Q99567 741 aaPredicted RBP16.32■□□□□ 0.2
NEDD4L-238ENST00000635997 DBNLQ9UJU6 430 aaKnown RBP16.32■□□□□ 0.2
NEDD4L-238ENST00000635997 RAD50Q92878 1312 aa16.32■□□□□ 0.2
NEDD4L-238ENST00000635997 FKBP15Q5T1M5 1219 aa16.32■□□□□ 0.2
NEDD4L-238ENST00000635997 SYCP3Q8IZU3 236 aa16.32■□□□□ 0.2
NEDD4L-238ENST00000635997 PATL2C9JE40 543 aaKnown RBP16.32■□□□□ 0.2
NEDD4L-238ENST00000635997 CHRNDQ07001 517 aa16.32■□□□□ 0.2
NEDD4L-238ENST00000635997 ZNF174Q15697 407 aa16.32■□□□□ 0.2
NEDD4L-238ENST00000635997 CPXCR1Q8N123 301 aa16.32■□□□□ 0.2
NEDD4L-238ENST00000635997 LINC00116Q8NCU8 138 aa16.32■□□□□ 0.2
NEDD4L-238ENST00000635997 TSG101Q99816 390 aa16.32■□□□□ 0.2
NEDD4L-238ENST00000635997 EHMT1Q9H9B1 1298 aa16.32■□□□□ 0.2
NEDD4L-238ENST00000635997 MROH5Q6ZUA9 1318 aa16.32■□□□□ 0.2
NEDD4L-238ENST00000635997 A0A1B0GVL5 298 aa16.31■□□□□ 0.2
NEDD4L-238ENST00000635997 SPDYE3A6NKU9 549 aa16.31■□□□□ 0.2
NEDD4L-238ENST00000635997 STAT6P42226 847 aa16.31■□□□□ 0.2
NEDD4L-238ENST00000635997 LETM2Q2VYF4 491 aa16.31■□□□□ 0.2
NEDD4L-238ENST00000635997 NLRP10Q86W26 655 aa16.31■□□□□ 0.2
NEDD4L-238ENST00000635997 KCNG4Q8TDN1 519 aa16.31■□□□□ 0.2
NEDD4L-238ENST00000635997 ARHGEF10LQ9HCE6 1279 aa16.31■□□□□ 0.2
NEDD4L-238ENST00000635997 IGSF3O75054 1194 aa16.31■□□□□ 0.2
NEDD4L-238ENST00000635997 TRAF1Q13077 416 aa16.31■□□□□ 0.2
NEDD4L-238ENST00000635997 RRP36Q96EU6 259 aaKnown RBP16.31■□□□□ 0.2
NEDD4L-238ENST00000635997 SLC5A4Q9NY91 659 aa16.31■□□□□ 0.2
NEDD4L-238ENST00000635997 MED14O60244 1454 aa16.31■□□□□ 0.2
NEDD4L-238ENST00000635997 TNNT1P13805 278 aa16.31■□□□□ 0.2
NEDD4L-238ENST00000635997 TRIM47Q96LD4 638 aa16.31■□□□□ 0.2
NEDD4L-238ENST00000635997 AS3MTQ9HBK9 375 aa16.31■□□□□ 0.2
NEDD4L-238ENST00000635997 SPC25Q9HBM1 224 aa16.31■□□□□ 0.2
NEDD4L-238ENST00000635997 ANO6Q4KMQ2 910 aa16.31■□□□□ 0.2
NEDD4L-238ENST00000635997 RRAGBQ5VZM2 374 aa16.31■□□□□ 0.2
NEDD4L-238ENST00000635997 C6orf50Q9HD87 102 aa16.31■□□□□ 0.2
NEDD4L-238ENST00000635997 SPECC1Q5M775 1068 aa16.3■□□□□ 0.2
NEDD4L-238ENST00000635997 PPP4R3AQ6IN85 833 aa16.3■□□□□ 0.2
NEDD4L-238ENST00000635997 PRKAG2Q9UGJ0 569 aa16.3■□□□□ 0.2
NEDD4L-238ENST00000635997 KDRP35968 1356 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms