RNA–Protein interactions for RNA: ENST00000635991.1

CRNDE-213, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-213ENST00000635991 IMPDH2P12268 514 aa7.55□□□□□ -1.2
CRNDE-213ENST00000635991 PTPN11Q06124 597 aaPredicted RBP7.55□□□□□ -1.2
CRNDE-213ENST00000635991 DUOXA2Q1HG44 320 aa7.55□□□□□ -1.2
CRNDE-213ENST00000635991 PRRT3Q5FWE3 981 aa7.55□□□□□ -1.2
CRNDE-213ENST00000635991 IGF2-ASQ6U949 168 aa7.55□□□□□ -1.2
CRNDE-213ENST00000635991 HDXQ7Z353 690 aa7.55□□□□□ -1.2
CRNDE-213ENST00000635991 ZC3H12CQ9C0D7 883 aaKnown RBP7.55□□□□□ -1.2
CRNDE-213ENST00000635991 MRPL18Q9H0U6 180 aaKnown RBP7.55□□□□□ -1.2
CRNDE-213ENST00000635991 KCNK4Q9NYG8 393 aa7.55□□□□□ -1.2
CRNDE-213ENST00000635991 PCDHA4Q9UN74 947 aa7.55□□□□□ -1.2
CRNDE-213ENST00000635991 RIMBP3CA6NJZ7 1639 aa7.54□□□□□ -1.2
CRNDE-213ENST00000635991 RIMBP3BA6NNM3 1639 aa7.54□□□□□ -1.2
CRNDE-213ENST00000635991 RIMBP3Q9UFD9 1639 aa7.54□□□□□ -1.2
CRNDE-213ENST00000635991 TLR3O15455 904 aaKnown RBP7.54□□□□□ -1.2
CRNDE-213ENST00000635991 SSBP05455 408 aaKnown RBP eCLIP7.54□□□□□ -1.2
CRNDE-213ENST00000635991 SLFN14P0C7P3 912 aa7.54□□□□□ -1.2
CRNDE-213ENST00000635991 EXOSC6Q5RKV6 272 aaKnown RBP7.54□□□□□ -1.2
CRNDE-213ENST00000635991 MPRIPQ6WCQ1 1025 aa7.54□□□□□ -1.2
CRNDE-213ENST00000635991 BEND7Q8N7W2 519 aaPredicted RBP7.54□□□□□ -1.2
CRNDE-213ENST00000635991 ZSCAN1Q8NBB4 408 aa7.54□□□□□ -1.2
CRNDE-213ENST00000635991 FBXO27Q8NI29 283 aa7.54□□□□□ -1.2
CRNDE-213ENST00000635991 RNF208Q9H0X6 261 aa7.54□□□□□ -1.2
CRNDE-213ENST00000635991 PPP1R1BQ9UD71 204 aaPredicted RBP7.54□□□□□ -1.2
CRNDE-213ENST00000635991 PRR36Q9H6K5 1346 aa7.53□□□□□ -1.2
CRNDE-213ENST00000635991 DDX3YO15523 660 aaKnown RBP7.53□□□□□ -1.2
CRNDE-213ENST00000635991 AOC2O75106 756 aa7.53□□□□□ -1.2
CRNDE-213ENST00000635991 STK10O94804 968 aaKnown RBP7.53□□□□□ -1.2
CRNDE-213ENST00000635991 ATE1O95260 518 aa7.53□□□□□ -1.2
CRNDE-213ENST00000635991 GTF2F1P35269 517 aaKnown RBP eCLIP7.53□□□□□ -1.2
CRNDE-213ENST00000635991 INSM1Q01101 510 aaPredicted RBP7.53□□□□□ -1.2
CRNDE-213ENST00000635991 WIPI1Q5MNZ9 446 aaPredicted RBP7.53□□□□□ -1.2
CRNDE-213ENST00000635991 SOGA3Q5TF21 947 aa7.53□□□□□ -1.2
CRNDE-213ENST00000635991 CYB5RLQ6IPT4 315 aa7.53□□□□□ -1.2
CRNDE-213ENST00000635991 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.53□□□□□ -1.2
CRNDE-213ENST00000635991 UBASH3BQ8TF42 649 aa7.53□□□□□ -1.2
CRNDE-213ENST00000635991 PLPPR2Q96GM1 343 aa7.53□□□□□ -1.2
CRNDE-213ENST00000635991 WDR18Q9BV38 432 aa7.53□□□□□ -1.2
CRNDE-213ENST00000635991 RUSC1Q9BVN2 902 aa7.53□□□□□ -1.2
CRNDE-213ENST00000635991 SRRTQ9BXP5 876 aaKnown RBP7.53□□□□□ -1.2
CRNDE-213ENST00000635991 TMPRSS13Q9BYE2 586 aa7.53□□□□□ -1.2
CRNDE-213ENST00000635991 EHMT1Q9H9B1 1298 aa7.53□□□□□ -1.2
CRNDE-213ENST00000635991 SUGCTQ9HAC7 445 aa7.53□□□□□ -1.2
CRNDE-213ENST00000635991 PCDHGC5Q9Y5F6 944 aa7.53□□□□□ -1.2
CRNDE-213ENST00000635991 BAZ1BQ9UIG0 1483 aaKnown RBP7.52□□□□□ -1.21
CRNDE-213ENST00000635991 GFRA2O00451 464 aa7.52□□□□□ -1.21
CRNDE-213ENST00000635991 DLGAP3O95886 979 aa7.52□□□□□ -1.21
CRNDE-213ENST00000635991 SPATA31C1P0DKV0 1188 aa7.52□□□□□ -1.21
CRNDE-213ENST00000635991 LIG1P18858 919 aa7.52□□□□□ -1.21
CRNDE-213ENST00000635991 ERVK-24P63145 666 aa7.52□□□□□ -1.21
CRNDE-213ENST00000635991 RBL2Q08999 1139 aa7.52□□□□□ -1.21
CRNDE-213ENST00000635991 ZC3H12AQ5D1E8 599 aaKnown RBP7.52□□□□□ -1.21
CRNDE-213ENST00000635991 ELMO3Q96BJ8 720 aa7.52□□□□□ -1.21
CRNDE-213ENST00000635991 FERD3LQ96RJ6 166 aa7.52□□□□□ -1.21
CRNDE-213ENST00000635991 CYP4F12Q9HCS2 524 aa7.52□□□□□ -1.21
CRNDE-213ENST00000635991 BRMS1Q9HCU9 246 aa7.52□□□□□ -1.21
CRNDE-213ENST00000635991 RAD18Q9NS91 495 aa7.52□□□□□ -1.21
CRNDE-213ENST00000635991 ZNRF3Q9ULT6 936 aa7.52□□□□□ -1.21
CRNDE-213ENST00000635991 ARHGEF11O15085 1522 aa7.52□□□□□ -1.21
CRNDE-213ENST00000635991 WDR62O43379 1518 aa7.52□□□□□ -1.21
CRNDE-213ENST00000635991 SELPP16109 830 aa7.51□□□□□ -1.21
CRNDE-213ENST00000635991 LORP23490 312 aaPredicted RBP7.51□□□□□ -1.21
CRNDE-213ENST00000635991 MCM4P33991 863 aa7.51□□□□□ -1.21
CRNDE-213ENST00000635991 ID3Q02535 119 aa7.51□□□□□ -1.21
CRNDE-213ENST00000635991 PDE4BQ07343 736 aa7.51□□□□□ -1.21
CRNDE-213ENST00000635991 NBPF6Q5VWK0 638 aa7.51□□□□□ -1.21
CRNDE-213ENST00000635991 LRFN4Q6PJG9 635 aa7.51□□□□□ -1.21
CRNDE-213ENST00000635991 CYFIP1Q7L576 1253 aa7.51□□□□□ -1.21
CRNDE-213ENST00000635991 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.51□□□□□ -1.21
CRNDE-213ENST00000635991 ALYREFQ86V81 257 aaKnown RBP7.51□□□□□ -1.21
CRNDE-213ENST00000635991 TMEM130Q8N3G9 435 aa7.51□□□□□ -1.21
CRNDE-213ENST00000635991 SMG8Q8ND04 991 aaKnown RBP7.51□□□□□ -1.21
CRNDE-213ENST00000635991 OR6P1Q8NGX9 317 aa7.51□□□□□ -1.21
CRNDE-213ENST00000635991 CPLX3Q8WVH0 158 aa7.51□□□□□ -1.21
CRNDE-213ENST00000635991 DHX38Q92620 1227 aaKnown RBP7.51□□□□□ -1.21
CRNDE-213ENST00000635991 NBPF4Q96M43 638 aa7.51□□□□□ -1.21
CRNDE-213ENST00000635991 WISP1O95388 367 aa7.5□□□□□ -1.21
CRNDE-213ENST00000635991 RING1Q06587 406 aa7.5□□□□□ -1.21
CRNDE-213ENST00000635991 INPP5AQ14642 412 aa7.5□□□□□ -1.21
CRNDE-213ENST00000635991 NUTM2GQ5VZR2 741 aa7.5□□□□□ -1.21
CRNDE-213ENST00000635991 KIAA1211Q6ZU35 1233 aa7.5□□□□□ -1.21
CRNDE-213ENST00000635991 ACAD11Q709F0 780 aa7.5□□□□□ -1.21
CRNDE-213ENST00000635991 RBBP8NLQ8NC74 664 aaPredicted RBP7.5□□□□□ -1.21
CRNDE-213ENST00000635991 WDR89Q96FK6 387 aaPredicted RBP7.5□□□□□ -1.21
CRNDE-213ENST00000635991 SCARF2Q96GP6 870 aaPredicted RBP7.5□□□□□ -1.21
CRNDE-213ENST00000635991 NACC1Q96RE7 527 aa7.5□□□□□ -1.21
CRNDE-213ENST00000635991 ADAMTS8Q9UP79 889 aa7.5□□□□□ -1.21
CRNDE-213ENST00000635991 POLR3KQ9Y2Y1 108 aaPredicted RBP7.5□□□□□ -1.21
CRNDE-213ENST00000635991 PCDHB14Q9Y5E9 798 aa7.5□□□□□ -1.21
CRNDE-213ENST00000635991 KIF21AQ7Z4S6 1674 aa7.49□□□□□ -1.21
CRNDE-213ENST00000635991 EIF6P56537 245 aaKnown RBP7.49□□□□□ -1.21
CRNDE-213ENST00000635991 MLECQ14165 292 aa7.49□□□□□ -1.21
CRNDE-213ENST00000635991 LRRFIP1Q32MZ4 808 aaKnown RBP7.49□□□□□ -1.21
CRNDE-213ENST00000635991 TNNI3KQ59H18 835 aa7.49□□□□□ -1.21
CRNDE-213ENST00000635991 ANKRD34AQ69YU3 496 aa7.49□□□□□ -1.21
CRNDE-213ENST00000635991 CKAP2LQ8IYA6 745 aa7.49□□□□□ -1.21
CRNDE-213ENST00000635991 SHDQ96IW2 340 aa7.49□□□□□ -1.21
CRNDE-213ENST00000635991 CRBNQ96SW2 442 aa7.49□□□□□ -1.21
CRNDE-213ENST00000635991 ATXN3LQ9H3M9 355 aa7.49□□□□□ -1.21
CRNDE-213ENST00000635991 ZNF408Q9H9D4 720 aa7.49□□□□□ -1.21
CRNDE-213ENST00000635991 CRIM1Q9NZV1 1036 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms