RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 PODNQ7Z5L7 613 aa11.78□□□□□ -0.52
CACNA1A-216ENST00000635742 ATP8A2Q9NTI2 1148 aa11.78□□□□□ -0.52
CACNA1A-216ENST00000635742 DAGLAQ9Y4D2 1042 aa11.78□□□□□ -0.52
CACNA1A-216ENST00000635742 SH2B2O14492 632 aaPredicted RBP11.78□□□□□ -0.52
CACNA1A-216ENST00000635742 BRD1O95696 1058 aa11.78□□□□□ -0.52
CACNA1A-216ENST00000635742 BAG3O95817 575 aa11.78□□□□□ -0.52
CACNA1A-216ENST00000635742 EVCP57679 992 aa11.78□□□□□ -0.52
CACNA1A-216ENST00000635742 PLCB2Q00722 1185 aa11.78□□□□□ -0.52
CACNA1A-216ENST00000635742 RRP12Q5JTH9 1297 aaKnown RBP11.78□□□□□ -0.52
CACNA1A-216ENST00000635742 FOXD4L5Q5VV16 416 aaPredicted RBP11.78□□□□□ -0.52
CACNA1A-216ENST00000635742 FOXD4L4Q8WXT5 416 aaPredicted RBP11.78□□□□□ -0.52
CACNA1A-216ENST00000635742 NOL10Q9BSC4 688 aaKnown RBP11.78□□□□□ -0.52
CACNA1A-216ENST00000635742 CNNM2Q9H8M5 875 aa11.78□□□□□ -0.52
CACNA1A-216ENST00000635742 MKRN1Q9UHC7 482 aaKnown RBP11.78□□□□□ -0.52
CACNA1A-216ENST00000635742 BRPF3Q9ULD4 1205 aa11.78□□□□□ -0.52
CACNA1A-216ENST00000635742 KLF18A0A0U1RQI7 1052 aa11.77□□□□□ -0.53
CACNA1A-216ENST00000635742 PPIP5K2O43314 1243 aa11.77□□□□□ -0.53
CACNA1A-216ENST00000635742 JAK2O60674 1132 aa11.77□□□□□ -0.53
CACNA1A-216ENST00000635742 USP17L8P0C7I0 530 aa11.77□□□□□ -0.53
CACNA1A-216ENST00000635742 PDIA3P30101 505 aaKnown RBP11.77□□□□□ -0.53
CACNA1A-216ENST00000635742 MCM4P33991 863 aa11.77□□□□□ -0.53
CACNA1A-216ENST00000635742 TGFB2P61812 414 aa11.77□□□□□ -0.53
CACNA1A-216ENST00000635742 SUPT20HQ8NEM7 779 aa11.77□□□□□ -0.53
CACNA1A-216ENST00000635742 FAM163AQ96GL9 167 aaPredicted RBP11.77□□□□□ -0.53
CACNA1A-216ENST00000635742 KRT23Q9C075 422 aa11.77□□□□□ -0.53
CACNA1A-216ENST00000635742 RNF41Q9H4P4 317 aaPredicted RBP11.77□□□□□ -0.53
CACNA1A-216ENST00000635742 SENP2Q9HC62 589 aa11.77□□□□□ -0.53
CACNA1A-216ENST00000635742 TOMM22Q9NS69 142 aa11.77□□□□□ -0.53
CACNA1A-216ENST00000635742 ARPP21Q9UBL0 812 aaPredicted RBP11.77□□□□□ -0.53
CACNA1A-216ENST00000635742 NAP1L2Q9ULW6 460 aaPredicted RBP11.77□□□□□ -0.53
CACNA1A-216ENST00000635742 TTF2Q9UNY4 1162 aaKnown RBP11.77□□□□□ -0.53
CACNA1A-216ENST00000635742 SUGT1Q9Y2Z0 365 aa11.77□□□□□ -0.53
CACNA1A-216ENST00000635742 ECM29Q5VYK3 1845 aa11.77□□□□□ -0.53
CACNA1A-216ENST00000635742 MYH1P12882 1939 aa11.77□□□□□ -0.53
CACNA1A-216ENST00000635742 USP5P45974 858 aa11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 RHBDL3P58872 404 aa11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 CCT2P78371 535 aaKnown RBP11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 SLC4A8Q2Y0W8 1093 aa11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 SBK1Q52WX2 424 aa11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 DACT2Q5SW24 774 aa11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 RAB11FIP4Q86YS3 637 aa11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 TGFBRAP1Q8WUH2 860 aa11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 ZNF274Q96GC6 653 aaPredicted RBP11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 NCOA5Q9HCD5 579 aaKnown RBP11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 MCM9Q9NXL9 1143 aa11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 ZSWIM5Q9P217 1185 aa11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 ANGEL1Q9UNK9 670 aaKnown RBP11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 FER1L6Q2WGJ9 1857 aa11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 YDJCA8MPS7 323 aa11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 GOLGA8BA8MQT2 603 aa11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 PRDM1O75626 825 aa11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 SYT1P21579 422 aa11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 SCNN1DP51172 638 aa11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 MAPKAPK5Q8IW41 473 aa11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 SLF2Q8IX21 1173 aa11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 TEX11Q8IYF3 940 aa11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 IGDCC4Q8TDY8 1250 aa11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 TMEM87BQ96K49 555 aa11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 PSMD1Q99460 953 aa11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 LY9Q9HBG7 655 aa11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 HPS5Q9UPZ3 1129 aa11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.76□□□□□ -0.53
CACNA1A-216ENST00000635742 CTDNEP1O95476 244 aa11.75□□□□□ -0.53
CACNA1A-216ENST00000635742 FGRP09769 529 aa11.75□□□□□ -0.53
CACNA1A-216ENST00000635742 PTGER2P43116 358 aa11.75□□□□□ -0.53
CACNA1A-216ENST00000635742 TMEM132AQ24JP5 1023 aa11.75□□□□□ -0.53
CACNA1A-216ENST00000635742 STRIP1Q5VSL9 837 aa11.75□□□□□ -0.53
CACNA1A-216ENST00000635742 RTKN2Q8IZC4 609 aa11.75□□□□□ -0.53
CACNA1A-216ENST00000635742 NSUN7Q8NE18 718 aaKnown RBP11.75□□□□□ -0.53
CACNA1A-216ENST00000635742 CHAMP1Q96JM3 812 aa11.75□□□□□ -0.53
CACNA1A-216ENST00000635742 ZKSCAN3Q9BRR0 538 aa11.75□□□□□ -0.53
CACNA1A-216ENST00000635742 ZNF277Q9NRM2 450 aaPredicted RBP11.75□□□□□ -0.53
CACNA1A-216ENST00000635742 PIM2Q9P1W9 311 aa11.75□□□□□ -0.53
CACNA1A-216ENST00000635742 PPP1R1BQ9UD71 204 aaPredicted RBP11.75□□□□□ -0.53
CACNA1A-216ENST00000635742 ROBO3Q96MS0 1386 aa11.75□□□□□ -0.53
CACNA1A-216ENST00000635742 FLT1P17948 1338 aa11.75□□□□□ -0.53
CACNA1A-216ENST00000635742 IFIT3O14879 490 aaKnown RBP11.74□□□□□ -0.53
CACNA1A-216ENST00000635742 STX6O43752 255 aa11.74□□□□□ -0.53
CACNA1A-216ENST00000635742 BAG4O95429 457 aaKnown RBP11.74□□□□□ -0.53
CACNA1A-216ENST00000635742 GRIPAP1Q4V328 841 aa11.74□□□□□ -0.53
CACNA1A-216ENST00000635742 TMEM67Q5HYA8 995 aa11.74□□□□□ -0.53
CACNA1A-216ENST00000635742 CLEC17AQ6ZS10 378 aa11.74□□□□□ -0.53
CACNA1A-216ENST00000635742 CERS3Q8IU89 383 aa11.74□□□□□ -0.53
CACNA1A-216ENST00000635742 SMARCC2Q8TAQ2 1214 aa11.74□□□□□ -0.53
CACNA1A-216ENST00000635742 GBP4Q96PP9 640 aa11.74□□□□□ -0.53
CACNA1A-216ENST00000635742 SAP30BPQ9UHR5 308 aaKnown RBP11.74□□□□□ -0.53
CACNA1A-216ENST00000635742 PTPDC1A2A3K4 754 aa11.74□□□□□ -0.53
CACNA1A-216ENST00000635742 USP17L3A6NCW0 530 aa11.74□□□□□ -0.53
CACNA1A-216ENST00000635742 USP17L4A6NCW7 530 aa11.74□□□□□ -0.53
CACNA1A-216ENST00000635742 PLCG2P16885 1265 aa11.74□□□□□ -0.53
CACNA1A-216ENST00000635742 FKBP1AP62942 108 aaKnown RBP11.74□□□□□ -0.53
CACNA1A-216ENST00000635742 C12orf60Q5U649 245 aa11.74□□□□□ -0.53
CACNA1A-216ENST00000635742 USP17L1Q7RTZ2 530 aa11.74□□□□□ -0.53
CACNA1A-216ENST00000635742 KIAA0825Q8IV33 1275 aa11.74□□□□□ -0.53
CACNA1A-216ENST00000635742 ESR2Q92731 530 aa11.74□□□□□ -0.53
CACNA1A-216ENST00000635742 WDR33Q9C0J8 1336 aaKnown RBP11.73□□□□□ -0.53
CACNA1A-216ENST00000635742 ORC4O43929 436 aa11.73□□□□□ -0.53
CACNA1A-216ENST00000635742 PPFIA3O75145 1194 aa11.73□□□□□ -0.53
CACNA1A-216ENST00000635742 LIFRP42702 1097 aa11.73□□□□□ -0.53
CACNA1A-216ENST00000635742 DALRD3Q5D0E6 543 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms