RNA–Protein interactions for RNA: ENST00000635388.1

SMARCA2-239, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-239ENST00000635388 MAP3K1Q13233 1512 aa10.54□□□□□ -0.72
SMARCA2-239ENST00000635388 FAM177BA6PVY3 158 aa10.54□□□□□ -0.72
SMARCA2-239ENST00000635388 BMP6P22004 513 aa10.54□□□□□ -0.72
SMARCA2-239ENST00000635388 CDC25BP30305 580 aa10.54□□□□□ -0.72
SMARCA2-239ENST00000635388 PIP4K2BP78356 416 aa10.54□□□□□ -0.72
SMARCA2-239ENST00000635388 SETDB1Q15047 1291 aa10.54□□□□□ -0.72
SMARCA2-239ENST00000635388 MAP3K11Q16584 847 aa10.54□□□□□ -0.72
SMARCA2-239ENST00000635388 PCNX4Q63HM2 1172 aa10.54□□□□□ -0.72
SMARCA2-239ENST00000635388 WNT8BQ93098 351 aa10.54□□□□□ -0.72
SMARCA2-239ENST00000635388 TMEM74Q96NL1 305 aa10.54□□□□□ -0.72
SMARCA2-239ENST00000635388 TINF2Q9BSI4 451 aa10.54□□□□□ -0.72
SMARCA2-239ENST00000635388 ACBD3Q9H3P7 528 aa10.54□□□□□ -0.72
SMARCA2-239ENST00000635388 KIAA1107Q9UPP5 1409 aa10.54□□□□□ -0.72
SMARCA2-239ENST00000635388 ADGBQ8N7X0 1667 aa10.53□□□□□ -0.72
SMARCA2-239ENST00000635388 FSCN2O14926 492 aa10.53□□□□□ -0.72
SMARCA2-239ENST00000635388 RLBP1P12271 317 aa10.53□□□□□ -0.72
SMARCA2-239ENST00000635388 NME2P22392 152 aa10.53□□□□□ -0.72
SMARCA2-239ENST00000635388 SNRPNP63162 240 aaKnown RBP10.53□□□□□ -0.72
SMARCA2-239ENST00000635388 PPP2R3AQ06190 1150 aa10.53□□□□□ -0.72
SMARCA2-239ENST00000635388 TTBK2Q6IQ55 1244 aa10.53□□□□□ -0.72
SMARCA2-239ENST00000635388 LINC00114Q6XXX2 140 aa10.53□□□□□ -0.72
SMARCA2-239ENST00000635388 AGMOQ6ZNB7 445 aa10.53□□□□□ -0.72
SMARCA2-239ENST00000635388 ZNF654Q8IZM8 581 aa10.53□□□□□ -0.72
SMARCA2-239ENST00000635388 TRIM11Q96F44 468 aa10.53□□□□□ -0.72
SMARCA2-239ENST00000635388 KCNQ5Q9NR82 932 aa10.53□□□□□ -0.72
SMARCA2-239ENST00000635388 TLR6Q9Y2C9 796 aa10.53□□□□□ -0.72
SMARCA2-239ENST00000635388 CAMSAP2Q08AD1 1489 aa10.53□□□□□ -0.72
SMARCA2-239ENST00000635388 GARTP22102 1010 aa10.52□□□□□ -0.73
SMARCA2-239ENST00000635388 RPS26P62854 115 aaKnown RBP10.52□□□□□ -0.73
SMARCA2-239ENST00000635388 PWP1Q13610 501 aa10.52□□□□□ -0.73
SMARCA2-239ENST00000635388 PDZD3Q86UT5 571 aa10.52□□□□□ -0.73
SMARCA2-239ENST00000635388 SULF2Q8IWU5 870 aa10.52□□□□□ -0.73
SMARCA2-239ENST00000635388 DMRTC2Q8IXT2 367 aaPredicted RBP10.52□□□□□ -0.73
SMARCA2-239ENST00000635388 GALNT11Q8NCW6 608 aa10.52□□□□□ -0.73
SMARCA2-239ENST00000635388 OSGEPQ9NPF4 335 aa10.52□□□□□ -0.73
SMARCA2-239ENST00000635388 ADAMTS1Q9UHI8 967 aa10.52□□□□□ -0.73
SMARCA2-239ENST00000635388 AGLP35573 1532 aa10.52□□□□□ -0.73
SMARCA2-239ENST00000635388 DEAF1O75398 565 aaPredicted RBP10.51□□□□□ -0.73
SMARCA2-239ENST00000635388 TFE3P19532 575 aaPredicted RBP10.51□□□□□ -0.73
SMARCA2-239ENST00000635388 TNNI2P48788 182 aa10.51□□□□□ -0.73
SMARCA2-239ENST00000635388 C19orf57Q0VDD7 668 aa10.51□□□□□ -0.73
SMARCA2-239ENST00000635388 MLECQ14165 292 aa10.51□□□□□ -0.73
SMARCA2-239ENST00000635388 NEDD1Q8NHV4 660 aa10.51□□□□□ -0.73
SMARCA2-239ENST00000635388 SLC7A3Q8WY07 619 aa10.51□□□□□ -0.73
SMARCA2-239ENST00000635388 CARD10Q9BWT7 1032 aa10.51□□□□□ -0.73
SMARCA2-239ENST00000635388 CCSER2Q9H7U1 834 aa10.51□□□□□ -0.73
SMARCA2-239ENST00000635388 PLXNC1O60486 1568 aa10.51□□□□□ -0.73
SMARCA2-239ENST00000635388 GBP2P32456 591 aaPredicted RBP10.5□□□□□ -0.73
SMARCA2-239ENST00000635388 HNRNPMP52272 730 aaKnown RBP eCLIP10.5□□□□□ -0.73
SMARCA2-239ENST00000635388 ZNF252P-AS1Q0IIN9 211 aa10.5□□□□□ -0.73
SMARCA2-239ENST00000635388 NAALADL2Q58DX5 795 aa10.5□□□□□ -0.73
SMARCA2-239ENST00000635388 RELL1Q8IUW5 271 aa10.5□□□□□ -0.73
SMARCA2-239ENST00000635388 ENAMQ9NRM1 1142 aa10.5□□□□□ -0.73
SMARCA2-239ENST00000635388 SPAG9O60271 1321 aaKnown RBP10.5□□□□□ -0.73
SMARCA2-239ENST00000635388 CCDC141Q6ZP82 1450 aa10.49□□□□□ -0.73
SMARCA2-239ENST00000635388 ARHGEF5Q12774 1597 aa10.49□□□□□ -0.73
SMARCA2-239ENST00000635388 SETD1BQ9UPS6 1966 aaKnown RBP10.49□□□□□ -0.73
SMARCA2-239ENST00000635388 FAM117BQ6P1L5 589 aa10.49□□□□□ -0.73
SMARCA2-239ENST00000635388 KLHDC7BQ96G42 594 aa10.49□□□□□ -0.73
SMARCA2-239ENST00000635388 RRAGCQ9HB90 399 aa10.49□□□□□ -0.73
SMARCA2-239ENST00000635388 C3P01024 1663 aa10.49□□□□□ -0.73
SMARCA2-239ENST00000635388 PREX1Q8TCU6 1659 aa10.49□□□□□ -0.73
SMARCA2-239ENST00000635388 ZNF644Q9H582 1327 aaPredicted RBP10.49□□□□□ -0.73
SMARCA2-239ENST00000635388 MBD5Q9P267 1494 aa10.49□□□□□ -0.73
SMARCA2-239ENST00000635388 MINDY4BA8MYZ0 360 aa10.48□□□□□ -0.73
SMARCA2-239ENST00000635388 ADAM11O75078 769 aa10.48□□□□□ -0.73
SMARCA2-239ENST00000635388 PF4P02776 101 aa10.48□□□□□ -0.73
SMARCA2-239ENST00000635388 ARNTP27540 789 aa10.48□□□□□ -0.73
SMARCA2-239ENST00000635388 EIF4A3P38919 411 aaKnown RBP10.48□□□□□ -0.73
SMARCA2-239ENST00000635388 GSTM4Q03013 218 aa10.48□□□□□ -0.73
SMARCA2-239ENST00000635388 LMNB2Q03252 620 aa10.48□□□□□ -0.73
SMARCA2-239ENST00000635388 AP3B2Q13367 1082 aa10.48□□□□□ -0.73
SMARCA2-239ENST00000635388 FOXD4L6Q3SYB3 417 aaPredicted RBP10.48□□□□□ -0.73
SMARCA2-239ENST00000635388 FOXD4L3Q6VB84 417 aaPredicted RBP10.48□□□□□ -0.73
SMARCA2-239ENST00000635388 MAP4K3Q8IVH8 894 aa10.48□□□□□ -0.73
SMARCA2-239ENST00000635388 DTWD1Q8N5C7 304 aa10.48□□□□□ -0.73
SMARCA2-239ENST00000635388 KLHL23Q8NBE8 558 aa10.48□□□□□ -0.73
SMARCA2-239ENST00000635388 GRIN3AQ8TCU5 1115 aa10.48□□□□□ -0.73
SMARCA2-239ENST00000635388 GAL3ST3Q96A11 431 aa10.48□□□□□ -0.73
SMARCA2-239ENST00000635388 CACNA2D2Q9NY47 1150 aa10.48□□□□□ -0.73
SMARCA2-239ENST00000635388 PCDHB5Q9Y5E4 795 aa10.48□□□□□ -0.73
SMARCA2-239ENST00000635388 MROH2AA6NES4 1674 aa10.47□□□□□ -0.73
SMARCA2-239ENST00000635388 ECEL1O95672 775 aa10.47□□□□□ -0.73
SMARCA2-239ENST00000635388 CTSBP07858 339 aa10.47□□□□□ -0.73
SMARCA2-239ENST00000635388 GJA8P48165 433 aa10.47□□□□□ -0.73
SMARCA2-239ENST00000635388 CAMK2GQ13555 558 aaPredicted RBP10.47□□□□□ -0.73
SMARCA2-239ENST00000635388 SAMM50Q9Y512 469 aa10.47□□□□□ -0.73
SMARCA2-239ENST00000635388 MYOM3Q5VTT5 1437 aa10.47□□□□□ -0.73
SMARCA2-239ENST00000635388 CROCC2H7BZ55 1655 aa10.47□□□□□ -0.73
SMARCA2-239ENST00000635388 A0A0A0MRY4 1105 aa10.46□□□□□ -0.73
SMARCA2-239ENST00000635388 FBXL19Q6PCT2 694 aa10.46□□□□□ -0.73
SMARCA2-239ENST00000635388 TRIM42Q8IWZ5 723 aa10.46□□□□□ -0.73
SMARCA2-239ENST00000635388 DDX54Q8TDD1 881 aaKnown RBP10.46□□□□□ -0.73
SMARCA2-239ENST00000635388 KCNK4Q9NYG8 393 aa10.46□□□□□ -0.73
SMARCA2-239ENST00000635388 CYP8B1Q9UNU6 501 aa10.46□□□□□ -0.73
SMARCA2-239ENST00000635388 A2MP01023 1474 aa10.46□□□□□ -0.74
SMARCA2-239ENST00000635388 LMTK3Q96Q04 1460 aa10.46□□□□□ -0.74
SMARCA2-239ENST00000635388 CLTCQ00610 1675 aaKnown RBP10.45□□□□□ -0.74
SMARCA2-239ENST00000635388 GREM1O60565 184 aa10.45□□□□□ -0.74
SMARCA2-239ENST00000635388 GSTP1P09211 210 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms