RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 MAP3K12Q12852 859 aa12.34□□□□□ -0.43
PSPC1-207ENST00000635251 CFAP100Q494V2 611 aa12.34□□□□□ -0.43
PSPC1-207ENST00000635251 RRP12Q5JTH9 1297 aaKnown RBP12.34□□□□□ -0.43
PSPC1-207ENST00000635251 IFNL3Q8IZI9 196 aa12.34□□□□□ -0.43
PSPC1-207ENST00000635251 SPATA5Q8NB90 893 aa12.34□□□□□ -0.43
PSPC1-207ENST00000635251 WASF1Q92558 559 aa12.34□□□□□ -0.43
PSPC1-207ENST00000635251 PPP1R13BQ96KQ4 1090 aa12.34□□□□□ -0.43
PSPC1-207ENST00000635251 MAP3K14Q99558 947 aa12.34□□□□□ -0.43
PSPC1-207ENST00000635251 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.34□□□□□ -0.43
PSPC1-207ENST00000635251 OGFRQ9NZT2 677 aa12.34□□□□□ -0.43
PSPC1-207ENST00000635251 PRDM4Q9UKN5 801 aa12.34□□□□□ -0.43
PSPC1-207ENST00000635251 ZBTB1Q9Y2K1 713 aa12.34□□□□□ -0.43
PSPC1-207ENST00000635251 UBN2Q6ZU65 1347 aa12.34□□□□□ -0.43
PSPC1-207ENST00000635251 PSDA5PKW4 1024 aaPredicted RBP12.34□□□□□ -0.43
PSPC1-207ENST00000635251 ZSCAN20P17040 1043 aaPredicted RBP12.34□□□□□ -0.43
PSPC1-207ENST00000635251 SAFBQ15424 915 aaKnown RBP eCLIP12.34□□□□□ -0.43
PSPC1-207ENST00000635251 NTRK3Q16288 839 aa12.34□□□□□ -0.43
PSPC1-207ENST00000635251 RESP18Q5W5W9 173 aa12.34□□□□□ -0.43
PSPC1-207ENST00000635251 SGMS1Q86VZ5 419 aa12.34□□□□□ -0.43
PSPC1-207ENST00000635251 SYTL4Q96C24 671 aaPredicted RBP12.34□□□□□ -0.43
PSPC1-207ENST00000635251 ARMT1Q9H993 441 aa12.34□□□□□ -0.43
PSPC1-207ENST00000635251 ZSWIM5Q9P217 1185 aa12.34□□□□□ -0.43
PSPC1-207ENST00000635251 SLAIN2Q9P270 581 aa12.34□□□□□ -0.43
PSPC1-207ENST00000635251 MROH5Q6ZUA9 1318 aa12.33□□□□□ -0.44
PSPC1-207ENST00000635251 CYP19A1P11511 503 aaPredicted RBP12.33□□□□□ -0.44
PSPC1-207ENST00000635251 PDE4CQ08493 712 aa12.33□□□□□ -0.44
PSPC1-207ENST00000635251 SYT10Q6XYQ8 523 aa12.33□□□□□ -0.44
PSPC1-207ENST00000635251 MFSD6Q6ZSS7 791 aa12.33□□□□□ -0.44
PSPC1-207ENST00000635251 DZIP3Q86Y13 1208 aaKnown RBP12.33□□□□□ -0.44
PSPC1-207ENST00000635251 HOMER1Q86YM7 354 aa12.33□□□□□ -0.44
PSPC1-207ENST00000635251 KRT23Q9C075 422 aa12.33□□□□□ -0.44
PSPC1-207ENST00000635251 CNNM2Q9H8M5 875 aa12.33□□□□□ -0.44
PSPC1-207ENST00000635251 AKAP11Q9UKA4 1901 aa12.33□□□□□ -0.44
PSPC1-207ENST00000635251 UBE2Q2LH0YL09 131 aa12.32□□□□□ -0.44
PSPC1-207ENST00000635251 FMNL1O95466 1100 aaPredicted RBP12.32□□□□□ -0.44
PSPC1-207ENST00000635251 LIFRP42702 1097 aa12.32□□□□□ -0.44
PSPC1-207ENST00000635251 TDO2P48775 406 aa12.32□□□□□ -0.44
PSPC1-207ENST00000635251 ALX1Q15699 326 aa12.32□□□□□ -0.44
PSPC1-207ENST00000635251 LONRF3Q496Y0 759 aa12.32□□□□□ -0.44
PSPC1-207ENST00000635251 KRBA2Q6ZNG9 492 aa12.32□□□□□ -0.44
PSPC1-207ENST00000635251 STK11IPQ8N1F8 1099 aa12.32□□□□□ -0.44
PSPC1-207ENST00000635251 KRI1Q8N9T8 703 aaKnown RBP12.32□□□□□ -0.44
PSPC1-207ENST00000635251 ZNF397Q8NF99 534 aaPredicted RBP12.32□□□□□ -0.44
PSPC1-207ENST00000635251 MPHOSPH8Q99549 860 aa12.32□□□□□ -0.44
PSPC1-207ENST00000635251 EPB41L4AQ9HCS5 686 aaPredicted RBP12.32□□□□□ -0.44
PSPC1-207ENST00000635251 FAM217BQ9NTX9 383 aaPredicted RBP12.32□□□□□ -0.44
PSPC1-207ENST00000635251 HOOK1Q9UJC3 728 aaKnown RBP12.32□□□□□ -0.44
PSPC1-207ENST00000635251 KCNH3Q9ULD8 1083 aa12.32□□□□□ -0.44
PSPC1-207ENST00000635251 ERICH2A1L162 156 aa12.32□□□□□ -0.44
PSPC1-207ENST00000635251 CCP110O43303 1012 aa12.32□□□□□ -0.44
PSPC1-207ENST00000635251 SART3Q15020 963 aaKnown RBP12.32□□□□□ -0.44
PSPC1-207ENST00000635251 ELF2Q15723 593 aa12.32□□□□□ -0.44
PSPC1-207ENST00000635251 SPECC1Q5M775 1068 aa12.32□□□□□ -0.44
PSPC1-207ENST00000635251 AKNAD1Q5T1N1 836 aa12.32□□□□□ -0.44
PSPC1-207ENST00000635251 UTP14CQ5TAP6 766 aaKnown RBP12.32□□□□□ -0.44
PSPC1-207ENST00000635251 METTL16Q86W50 562 aaKnown RBP12.32□□□□□ -0.44
PSPC1-207ENST00000635251 NOSTRINQ8IVI9 506 aa12.32□□□□□ -0.44
PSPC1-207ENST00000635251 TRIM22Q8IYM9 498 aa12.32□□□□□ -0.44
PSPC1-207ENST00000635251 ZKSCAN3Q9BRR0 538 aa12.32□□□□□ -0.44
PSPC1-207ENST00000635251 GTPBP4Q9BZE4 634 aaKnown RBP12.32□□□□□ -0.44
PSPC1-207ENST00000635251 STK36Q9NRP7 1315 aa12.32□□□□□ -0.44
PSPC1-207ENST00000635251 FAM237AA0A1B0GTK4 181 aa12.31□□□□□ -0.44
PSPC1-207ENST00000635251 KCNJ6P48051 423 aa12.31□□□□□ -0.44
PSPC1-207ENST00000635251 CCDC82Q8N4S0 544 aa12.31□□□□□ -0.44
PSPC1-207ENST00000635251 DPF2Q92785 391 aa12.31□□□□□ -0.44
PSPC1-207ENST00000635251 NACAP1Q9BZK3 213 aa12.31□□□□□ -0.44
PSPC1-207ENST00000635251 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.31□□□□□ -0.44
PSPC1-207ENST00000635251 PCDHA5Q9Y5H7 936 aa12.31□□□□□ -0.44
PSPC1-207ENST00000635251 BTBD18B2RXH4 712 aa12.31□□□□□ -0.44
PSPC1-207ENST00000635251 NPHP1O15259 732 aa12.31□□□□□ -0.44
PSPC1-207ENST00000635251 TOP1P11387 765 aaKnown RBP12.31□□□□□ -0.44
PSPC1-207ENST00000635251 IFNAR1P17181 557 aa12.31□□□□□ -0.44
PSPC1-207ENST00000635251 FGFR2P21802 821 aa12.31□□□□□ -0.44
PSPC1-207ENST00000635251 RASGRF1Q13972 1273 aa12.31□□□□□ -0.44
PSPC1-207ENST00000635251 WTAPQ15007 396 aa12.31□□□□□ -0.44
PSPC1-207ENST00000635251 RTN1Q16799 776 aa12.31□□□□□ -0.44
PSPC1-207ENST00000635251 DIS3L2Q8IYB7 885 aaKnown RBP12.31□□□□□ -0.44
PSPC1-207ENST00000635251 HSD3B7Q9H2F3 369 aa12.31□□□□□ -0.44
PSPC1-207ENST00000635251 KCNJ14Q9UNX9 436 aa12.31□□□□□ -0.44
PSPC1-207ENST00000635251 SLC4A4Q9Y6R1 1079 aa12.31□□□□□ -0.44
PSPC1-207ENST00000635251 SNAP23O00161 211 aa12.3□□□□□ -0.44
PSPC1-207ENST00000635251 PRKAB2O43741 272 aa12.3□□□□□ -0.44
PSPC1-207ENST00000635251 MMP1P03956 469 aa12.3□□□□□ -0.44
PSPC1-207ENST00000635251 TUBB4AP04350 444 aa12.3□□□□□ -0.44
PSPC1-207ENST00000635251 SLC4A9Q96Q91 983 aa12.3□□□□□ -0.44
PSPC1-207ENST00000635251 FANCLQ9NW38 375 aa12.3□□□□□ -0.44
PSPC1-207ENST00000635251 BTG4Q9NY30 223 aa12.3□□□□□ -0.44
PSPC1-207ENST00000635251 DDX41Q9UJV9 622 aaKnown RBP12.3□□□□□ -0.44
PSPC1-207ENST00000635251 ZHX1Q9UKY1 873 aaPredicted RBP12.3□□□□□ -0.44
PSPC1-207ENST00000635251 GSG1L2A8MUP6 293 aa12.3□□□□□ -0.44
PSPC1-207ENST00000635251 ERVV-1B6SEH8 477 aa12.3□□□□□ -0.44
PSPC1-207ENST00000635251 FOXN1O15353 648 aa12.3□□□□□ -0.44
PSPC1-207ENST00000635251 GUCY1A2P33402 732 aa12.3□□□□□ -0.44
PSPC1-207ENST00000635251 KMT5BQ4FZB7 885 aa12.3□□□□□ -0.44
PSPC1-207ENST00000635251 NUP133Q8WUM0 1156 aa12.3□□□□□ -0.44
PSPC1-207ENST00000635251 LRP6O75581 1613 aa12.29□□□□□ -0.44
PSPC1-207ENST00000635251 MYO5AQ9Y4I1 1855 aaKnown RBP12.29□□□□□ -0.44
PSPC1-207ENST00000635251 A0A0G2JS52 829 aa12.29□□□□□ -0.44
PSPC1-207ENST00000635251 MYO1BO43795 1136 aa12.29□□□□□ -0.44
PSPC1-207ENST00000635251 GNAT2P19087 354 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms