RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 USP17L12C9JPN9 530 aa16.94■□□□□ 0.3
PHACTR4-209ENST00000633371 USP17L21D6R901 530 aa16.94■□□□□ 0.3
PHACTR4-209ENST00000633371 EPS15P42566 896 aa16.94■□□□□ 0.3
PHACTR4-209ENST00000633371 DLGAP5Q15398 846 aa16.94■□□□□ 0.3
PHACTR4-209ENST00000633371 NBPF9Q3BBW0 867 aa16.94■□□□□ 0.3
PHACTR4-209ENST00000633371 SBK1Q52WX2 424 aa16.94■□□□□ 0.3
PHACTR4-209ENST00000633371 SAMD7Q7Z3H4 446 aa16.94■□□□□ 0.3
PHACTR4-209ENST00000633371 CERS3Q8IU89 383 aa16.94■□□□□ 0.3
PHACTR4-209ENST00000633371 IDI2Q9BXS1 227 aa16.94■□□□□ 0.3
PHACTR4-209ENST00000633371 GPRC5DQ9NZD1 345 aa16.94■□□□□ 0.3
PHACTR4-209ENST00000633371 ZNF70Q9UC06 446 aaPredicted RBP16.94■□□□□ 0.3
PHACTR4-209ENST00000633371 CTNNA3Q9UI47 895 aa16.94■□□□□ 0.3
PHACTR4-209ENST00000633371 ASTN2O75129 1339 aaPredicted RBP16.94■□□□□ 0.3
PHACTR4-209ENST00000633371 WNT10BO00744 389 aa16.93■□□□□ 0.3
PHACTR4-209ENST00000633371 CPA1P15085 419 aa16.93■□□□□ 0.3
PHACTR4-209ENST00000633371 MCCP23508 829 aa16.93■□□□□ 0.3
PHACTR4-209ENST00000633371 USP5P45974 858 aa16.93■□□□□ 0.3
PHACTR4-209ENST00000633371 TDO2P48775 406 aa16.93■□□□□ 0.3
PHACTR4-209ENST00000633371 MMP14P50281 582 aa16.93■□□□□ 0.3
PHACTR4-209ENST00000633371 CTDSPL2Q05D32 466 aa16.93■□□□□ 0.3
PHACTR4-209ENST00000633371 SPDYE2Q495Y8 402 aa16.93■□□□□ 0.3
PHACTR4-209ENST00000633371 OGFOD1Q8N543 542 aa16.93■□□□□ 0.3
PHACTR4-209ENST00000633371 ANAPC4Q9UJX5 808 aa16.93■□□□□ 0.3
PHACTR4-209ENST00000633371 E7EWF7 191 aa16.92■□□□□ 0.3
PHACTR4-209ENST00000633371 HIRAP54198 1017 aaPredicted RBP16.92■□□□□ 0.3
PHACTR4-209ENST00000633371 PPARAQ07869 468 aa16.92■□□□□ 0.3
PHACTR4-209ENST00000633371 C12orf60Q5U649 245 aa16.92■□□□□ 0.3
PHACTR4-209ENST00000633371 SH3BP5LQ7L8J4 393 aa16.92■□□□□ 0.3
PHACTR4-209ENST00000633371 TRPM4Q8TD43 1214 aa16.92■□□□□ 0.3
PHACTR4-209ENST00000633371 NACAP1Q9BZK3 213 aa16.92■□□□□ 0.3
PHACTR4-209ENST00000633371 SAP30BPQ9UHR5 308 aaKnown RBP16.92■□□□□ 0.3
PHACTR4-209ENST00000633371 WDR90Q96KV7 1748 aa16.92■□□□□ 0.3
PHACTR4-209ENST00000633371 ZC3H4Q9UPT8 1303 aaKnown RBP16.92■□□□□ 0.3
PHACTR4-209ENST00000633371 MYH8P13535 1937 aa16.92■□□□□ 0.3
PHACTR4-209ENST00000633371 SCN4AP35499 1836 aa16.91■□□□□ 0.3
PHACTR4-209ENST00000633371 CNTNAP1P78357 1384 aa16.91■□□□□ 0.3
PHACTR4-209ENST00000633371 CLRN2A0PK11 232 aa16.91■□□□□ 0.3
PHACTR4-209ENST00000633371 POTECB2RU33 542 aa16.91■□□□□ 0.3
PHACTR4-209ENST00000633371 ZNF213O14771 459 aa16.91■□□□□ 0.3
PHACTR4-209ENST00000633371 NPM3O75607 178 aaKnown RBP16.91■□□□□ 0.3
PHACTR4-209ENST00000633371 PLCD1P51178 756 aa16.91■□□□□ 0.3
PHACTR4-209ENST00000633371 IMMTQ16891 758 aaKnown RBP16.91■□□□□ 0.3
PHACTR4-209ENST00000633371 TBC1D10BQ4KMP7 808 aaPredicted RBP16.91■□□□□ 0.3
PHACTR4-209ENST00000633371 RBM26Q5T8P6 1007 aaKnown RBP16.91■□□□□ 0.3
PHACTR4-209ENST00000633371 L3MBTL3Q96JM7 780 aaPredicted RBP16.91■□□□□ 0.3
PHACTR4-209ENST00000633371 TM6SF1Q9BZW5 370 aa16.91■□□□□ 0.3
PHACTR4-209ENST00000633371 OSBPL5Q9H0X9 879 aaPredicted RBP16.91■□□□□ 0.3
PHACTR4-209ENST00000633371 MCM9Q9NXL9 1143 aa16.91■□□□□ 0.3
PHACTR4-209ENST00000633371 PGAP2Q9UHJ9 254 aa16.91■□□□□ 0.3
PHACTR4-209ENST00000633371 GLTPD2A6NH11 291 aa16.9■□□□□ 0.3
PHACTR4-209ENST00000633371 MINDY4BA8MYZ0 360 aa16.9■□□□□ 0.3
PHACTR4-209ENST00000633371 CD2BP2O95400 341 aaKnown RBP16.9■□□□□ 0.3
PHACTR4-209ENST00000633371 FGRP09769 529 aa16.9■□□□□ 0.3
PHACTR4-209ENST00000633371 SLURP2P0DP57 97 aa16.9■□□□□ 0.3
PHACTR4-209ENST00000633371 PICALMQ13492 652 aa16.9■□□□□ 0.3
PHACTR4-209ENST00000633371 SLC4A8Q2Y0W8 1093 aa16.9■□□□□ 0.3
PHACTR4-209ENST00000633371 RNF20Q5VTR2 975 aa16.9■□□□□ 0.3
PHACTR4-209ENST00000633371 JAKMIP1Q96N16 626 aaKnown RBP16.9■□□□□ 0.3
PHACTR4-209ENST00000633371 ZSWIM6Q9HCJ5 1215 aa16.9■□□□□ 0.3
PHACTR4-209ENST00000633371 DDTLA6NHG4 134 aaPredicted RBP16.89■□□□□ 0.29
PHACTR4-209ENST00000633371 ZKSCAN1P17029 563 aaPredicted RBP16.89■□□□□ 0.29
PHACTR4-209ENST00000633371 KIF4BQ2VIQ3 1234 aa16.89■□□□□ 0.29
PHACTR4-209ENST00000633371 STAG1Q8WVM7 1258 aa16.89■□□□□ 0.29
PHACTR4-209ENST00000633371 DYNLL2Q96FJ2 89 aa16.89■□□□□ 0.29
PHACTR4-209ENST00000633371 TTC14Q96N46 770 aa16.89■□□□□ 0.29
PHACTR4-209ENST00000633371 UPF3BQ9BZI7 483 aaKnown RBP16.89■□□□□ 0.29
PHACTR4-209ENST00000633371 ARPP21Q9UBL0 812 aaPredicted RBP16.89■□□□□ 0.29
PHACTR4-209ENST00000633371 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.89■□□□□ 0.29
PHACTR4-209ENST00000633371 NEDD4P46934 1319 aa16.89■□□□□ 0.29
PHACTR4-209ENST00000633371 ROBO3Q96MS0 1386 aa16.89■□□□□ 0.29
PHACTR4-209ENST00000633371 H7C1D1 291 aa16.88■□□□□ 0.29
PHACTR4-209ENST00000633371 EXOSC10Q01780 885 aaKnown RBP16.88■□□□□ 0.29
PHACTR4-209ENST00000633371 TCP10Q12799 353 aa16.88■□□□□ 0.29
PHACTR4-209ENST00000633371 RABEP1Q15276 862 aa16.88■□□□□ 0.29
PHACTR4-209ENST00000633371 AKNAD1Q5T1N1 836 aa16.88■□□□□ 0.29
PHACTR4-209ENST00000633371 FKBP1CQ5VVH2 108 aa16.88■□□□□ 0.29
PHACTR4-209ENST00000633371 MB21D2Q8IYB1 491 aaPredicted RBP16.88■□□□□ 0.29
PHACTR4-209ENST00000633371 STK11IPQ8N1F8 1099 aa16.88■□□□□ 0.29
PHACTR4-209ENST00000633371 SCAF8Q9UPN6 1271 aaKnown RBP16.88■□□□□ 0.29
PHACTR4-209ENST00000633371 COL2A1P02458 1487 aaPredicted RBP16.87■□□□□ 0.29
PHACTR4-209ENST00000633371 TCP10L2B9ZVM9 353 aa16.87■□□□□ 0.29
PHACTR4-209ENST00000633371 ENTPD3O75355 529 aa16.87■□□□□ 0.29
PHACTR4-209ENST00000633371 CASTP20810 708 aaKnown RBP16.87■□□□□ 0.29
PHACTR4-209ENST00000633371 ANTXR2P58335 489 aa16.87■□□□□ 0.29
PHACTR4-209ENST00000633371 GABPAQ06546 454 aa16.87■□□□□ 0.29
PHACTR4-209ENST00000633371 CYB5R4Q7L1T6 521 aa16.87■□□□□ 0.29
PHACTR4-209ENST00000633371 CDAN1Q8IWY9 1227 aa16.87■□□□□ 0.29
PHACTR4-209ENST00000633371 SLC44A5Q8NCS7 719 aa16.87■□□□□ 0.29
PHACTR4-209ENST00000633371 NEK1Q96PY6 1258 aa16.87■□□□□ 0.29
PHACTR4-209ENST00000633371 ATRNL1Q5VV63 1379 aa16.87■□□□□ 0.29
PHACTR4-209ENST00000633371 RPS6KB1P23443 525 aa16.86■□□□□ 0.29
PHACTR4-209ENST00000633371 KRT32Q14532 448 aa16.86■□□□□ 0.29
PHACTR4-209ENST00000633371 DPY19L2Q6NUT2 758 aa16.86■□□□□ 0.29
PHACTR4-209ENST00000633371 RUFY3Q7L099 469 aa16.86■□□□□ 0.29
PHACTR4-209ENST00000633371 TCEANC2Q96MN5 208 aa16.86■□□□□ 0.29
PHACTR4-209ENST00000633371 GREB1LQ9C091 1923 aaPredicted RBP16.86■□□□□ 0.29
PHACTR4-209ENST00000633371 B4E1Z4 1266 aa16.85■□□□□ 0.29
PHACTR4-209ENST00000633371 POLR3DP05423 398 aaPredicted RBP16.85■□□□□ 0.29
PHACTR4-209ENST00000633371 NEK4P51957 841 aa16.85■□□□□ 0.29
PHACTR4-209ENST00000633371 FAM151AQ8WW52 585 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms