RNA–Protein interactions for RNA: ENST00000632758.1

LIMS4-203, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 1,580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-203ENST00000632758 SPDYE2Q495Y8 402 aa17.62■□□□□ 0.41
LIMS4-203ENST00000632758 GIMAP6Q6P9H5 292 aa17.62■□□□□ 0.41
LIMS4-203ENST00000632758 CTR9Q6PD62 1173 aa17.62■□□□□ 0.41
LIMS4-203ENST00000632758 SAP30BPQ9UHR5 308 aaKnown RBP17.62■□□□□ 0.41
LIMS4-203ENST00000632758 SCAF8Q9UPN6 1271 aaKnown RBP17.62■□□□□ 0.41
LIMS4-203ENST00000632758 FLT1P17948 1338 aa17.62■□□□□ 0.41
LIMS4-203ENST00000632758 TCP10L2B9ZVM9 353 aa17.62■□□□□ 0.41
LIMS4-203ENST00000632758 CYP2D6P10635 497 aa17.62■□□□□ 0.41
LIMS4-203ENST00000632758 RBM25P49756 843 aaKnown RBP17.62■□□□□ 0.41
LIMS4-203ENST00000632758 TCP10Q12799 353 aa17.62■□□□□ 0.41
LIMS4-203ENST00000632758 IDI2Q9BXS1 227 aa17.62■□□□□ 0.41
LIMS4-203ENST00000632758 MCM9Q9NXL9 1143 aa17.62■□□□□ 0.41
LIMS4-203ENST00000632758 CTNNA3Q9UI47 895 aa17.62■□□□□ 0.41
LIMS4-203ENST00000632758 MINDY4BA8MYZ0 360 aa17.61■□□□□ 0.41
LIMS4-203ENST00000632758 KCNB2Q92953 911 aa17.61■□□□□ 0.41
LIMS4-203ENST00000632758 VEZTQ9HBM0 779 aa17.61■□□□□ 0.41
LIMS4-203ENST00000632758 ADARB2Q9NS39 739 aaKnown RBP17.61■□□□□ 0.41
LIMS4-203ENST00000632758 HACL1Q9UJ83 578 aa17.61■□□□□ 0.41
LIMS4-203ENST00000632758 SNX14Q9Y5W7 946 aa17.61■□□□□ 0.41
LIMS4-203ENST00000632758 ZNF213O14771 459 aa17.6■□□□□ 0.41
LIMS4-203ENST00000632758 MYO1BO43795 1136 aa17.6■□□□□ 0.41
LIMS4-203ENST00000632758 MCCP23508 829 aa17.6■□□□□ 0.41
LIMS4-203ENST00000632758 CTDSPL2Q05D32 466 aa17.6■□□□□ 0.41
LIMS4-203ENST00000632758 STK11IPQ8N1F8 1099 aa17.6■□□□□ 0.41
LIMS4-203ENST00000632758 DDRGK1Q96HY6 314 aa17.6■□□□□ 0.41
LIMS4-203ENST00000632758 OSBPL5Q9H0X9 879 aaPredicted RBP17.6■□□□□ 0.41
LIMS4-203ENST00000632758 INCENPQ9NQS7 918 aa17.6■□□□□ 0.41
LIMS4-203ENST00000632758 TSHZ2Q9NRE2 1034 aa17.6■□□□□ 0.41
LIMS4-203ENST00000632758 TACC3Q9Y6A5 838 aa17.6■□□□□ 0.41
LIMS4-203ENST00000632758 PLCD1P51178 756 aa17.59■□□□□ 0.41
LIMS4-203ENST00000632758 IMMTQ16891 758 aaKnown RBP17.59■□□□□ 0.41
LIMS4-203ENST00000632758 KIF2CQ99661 725 aa17.59■□□□□ 0.41
LIMS4-203ENST00000632758 NBPF3Q9H094 633 aa17.59■□□□□ 0.41
LIMS4-203ENST00000632758 TMOD2Q9NZR1 351 aa17.59■□□□□ 0.41
LIMS4-203ENST00000632758 ZMYM6O95789 1325 aa17.59■□□□□ 0.41
LIMS4-203ENST00000632758 POLR3DP05423 398 aaPredicted RBP17.58■□□□□ 0.41
LIMS4-203ENST00000632758 EPHX2P34913 555 aa17.58■□□□□ 0.41
LIMS4-203ENST00000632758 PPARAQ07869 468 aa17.58■□□□□ 0.41
LIMS4-203ENST00000632758 SBK1Q52WX2 424 aa17.58■□□□□ 0.41
LIMS4-203ENST00000632758 C12orf60Q5U649 245 aa17.58■□□□□ 0.41
LIMS4-203ENST00000632758 SH3BP5LQ7L8J4 393 aa17.58■□□□□ 0.41
LIMS4-203ENST00000632758 DDTLA6NHG4 134 aaPredicted RBP17.57■□□□□ 0.4
LIMS4-203ENST00000632758 ENTPD3O75355 529 aa17.57■□□□□ 0.4
LIMS4-203ENST00000632758 NPM3O75607 178 aaKnown RBP17.57■□□□□ 0.4
LIMS4-203ENST00000632758 COL9A3Q14050 684 aaPredicted RBP17.57■□□□□ 0.4
LIMS4-203ENST00000632758 ADCK5Q3MIX3 580 aa17.57■□□□□ 0.4
LIMS4-203ENST00000632758 ANGEL2Q5VTE6 544 aaKnown RBP17.57■□□□□ 0.4
LIMS4-203ENST00000632758 RNF20Q5VTR2 975 aa17.57■□□□□ 0.4
LIMS4-203ENST00000632758 STOX1Q6ZVD7 989 aa17.57■□□□□ 0.4
LIMS4-203ENST00000632758 TBC1D10CQ8IV04 446 aa17.57■□□□□ 0.4
LIMS4-203ENST00000632758 TAF1DQ9H5J8 278 aaPredicted RBP17.57■□□□□ 0.4
LIMS4-203ENST00000632758 ARPP21Q9UBL0 812 aaPredicted RBP17.57■□□□□ 0.4
LIMS4-203ENST00000632758 CNTNAP1P78357 1384 aa17.57■□□□□ 0.4
LIMS4-203ENST00000632758 SLURP2P0DP57 97 aa17.57■□□□□ 0.4
LIMS4-203ENST00000632758 DYNLL2Q96FJ2 89 aa17.57■□□□□ 0.4
LIMS4-203ENST00000632758 RRAGCQ9HB90 399 aa17.57■□□□□ 0.4
LIMS4-203ENST00000632758 E7EWF7 191 aa17.56■□□□□ 0.4
LIMS4-203ENST00000632758 ZKSCAN1P17029 563 aaPredicted RBP17.56■□□□□ 0.4
LIMS4-203ENST00000632758 TSGA10IPQ3SY00 556 aa17.56■□□□□ 0.4
LIMS4-203ENST00000632758 FKBP1CQ5VVH2 108 aa17.56■□□□□ 0.4
LIMS4-203ENST00000632758 CDAN1Q8IWY9 1227 aa17.56■□□□□ 0.4
LIMS4-203ENST00000632758 NKX2-3Q8TAU0 364 aa17.56■□□□□ 0.4
LIMS4-203ENST00000632758 ZNF526Q8TF50 670 aaPredicted RBP17.56■□□□□ 0.4
LIMS4-203ENST00000632758 FAM151AQ8WW52 585 aa17.56■□□□□ 0.4
LIMS4-203ENST00000632758 TMEM39BQ9GZU3 492 aa17.56■□□□□ 0.4
LIMS4-203ENST00000632758 GGA3Q9NZ52 723 aa17.56■□□□□ 0.4
LIMS4-203ENST00000632758 ANAPC4Q9UJX5 808 aa17.56■□□□□ 0.4
LIMS4-203ENST00000632758 IQCA1LA6NCM1 817 aa17.55■□□□□ 0.4
LIMS4-203ENST00000632758 ANAPC15P60006 121 aa17.55■□□□□ 0.4
LIMS4-203ENST00000632758 RASA3Q14644 834 aa17.55■□□□□ 0.4
LIMS4-203ENST00000632758 USP50Q70EL3 339 aaPredicted RBP17.55■□□□□ 0.4
LIMS4-203ENST00000632758 ZSCAN29Q8IWY8 852 aaPredicted RBP17.55■□□□□ 0.4
LIMS4-203ENST00000632758 EAPPQ56P03 285 aaPredicted RBP17.54■□□□□ 0.4
LIMS4-203ENST00000632758 FAM83AQ86UY5 434 aa17.54■□□□□ 0.4
LIMS4-203ENST00000632758 PGAP2Q9UHJ9 254 aa17.54■□□□□ 0.4
LIMS4-203ENST00000632758 CPA1P15085 419 aa17.53■□□□□ 0.4
LIMS4-203ENST00000632758 AKNAD1Q5T1N1 836 aa17.53■□□□□ 0.4
LIMS4-203ENST00000632758 TTC6Q86TZ1 520 aa17.53■□□□□ 0.4
LIMS4-203ENST00000632758 AMOTL1Q8IY63 956 aa17.53■□□□□ 0.4
LIMS4-203ENST00000632758 IL17RAQ96F46 866 aa17.53■□□□□ 0.4
LIMS4-203ENST00000632758 JAKMIP1Q96N16 626 aaKnown RBP17.53■□□□□ 0.4
LIMS4-203ENST00000632758 DHX36Q9H2U1 1008 aaKnown RBP17.53■□□□□ 0.4
LIMS4-203ENST00000632758 BAZ2AQ9UIF9 1905 aaKnown RBP17.53■□□□□ 0.4
LIMS4-203ENST00000632758 CDK5RAP2Q96SN8 1893 aa17.53■□□□□ 0.4
LIMS4-203ENST00000632758 NEDD4P46934 1319 aa17.53■□□□□ 0.4
LIMS4-203ENST00000632758 PRDM1O75626 825 aa17.53■□□□□ 0.4
LIMS4-203ENST00000632758 POTEIP0CG38 1075 aa17.53■□□□□ 0.4
LIMS4-203ENST00000632758 POTEJP0CG39 1038 aa17.53■□□□□ 0.4
LIMS4-203ENST00000632758 TNNI2P48788 182 aa17.53■□□□□ 0.4
LIMS4-203ENST00000632758 DLK2Q6UY11 383 aa17.53■□□□□ 0.4
LIMS4-203ENST00000632758 SLC44A5Q8NCS7 719 aa17.53■□□□□ 0.4
LIMS4-203ENST00000632758 STAG1Q8WVM7 1258 aa17.53■□□□□ 0.4
LIMS4-203ENST00000632758 NEK1Q96PY6 1258 aa17.53■□□□□ 0.4
LIMS4-203ENST00000632758 DEFB129Q9H1M3 183 aa17.53■□□□□ 0.4
LIMS4-203ENST00000632758 NMRK2Q9NPI5 230 aa17.53■□□□□ 0.4
LIMS4-203ENST00000632758 WDR90Q96KV7 1748 aa17.52■□□□□ 0.4
LIMS4-203ENST00000632758 VEGFAP15692 232 aaPredicted RBP17.52■□□□□ 0.39
LIMS4-203ENST00000632758 PRAMEF18Q5VWM3 479 aa17.52■□□□□ 0.39
LIMS4-203ENST00000632758 MFSD6Q6ZSS7 791 aa17.52■□□□□ 0.39
LIMS4-203ENST00000632758 TEPSINQ96N21 525 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms