RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 CRNKL1Q9BZJ0 848 aaKnown RBP6.5□□□□□ -1.37
NEK3-211ENST00000629912 TSPY26PQ9H489 355 aa6.5□□□□□ -1.37
NEK3-211ENST00000629912 INCENPQ9NQS7 918 aa6.5□□□□□ -1.37
NEK3-211ENST00000629912 FAM217BQ9NTX9 383 aaPredicted RBP6.5□□□□□ -1.37
NEK3-211ENST00000629912 ANKIB1Q9P2G1 1089 aa6.5□□□□□ -1.37
NEK3-211ENST00000629912 NAP1L2Q9ULW6 460 aaPredicted RBP6.5□□□□□ -1.37
NEK3-211ENST00000629912 MYH2Q9UKX2 1941 aa6.5□□□□□ -1.37
NEK3-211ENST00000629912 STK36Q9NRP7 1315 aa6.5□□□□□ -1.37
NEK3-211ENST00000629912 BAZ2AQ9UIF9 1905 aaKnown RBP6.49□□□□□ -1.37
NEK3-211ENST00000629912 CCDC196A0A1B0GTZ2 297 aa6.49□□□□□ -1.37
NEK3-211ENST00000629912 ERICH2A1L162 156 aa6.49□□□□□ -1.37
NEK3-211ENST00000629912 GOLGA6L4A6NEF3 574 aa6.49□□□□□ -1.37
NEK3-211ENST00000629912 CCDC69A6NI79 296 aa6.49□□□□□ -1.37
NEK3-211ENST00000629912 MINDY4BA8MYZ0 360 aa6.49□□□□□ -1.37
NEK3-211ENST00000629912 IL1R1P14778 569 aa6.49□□□□□ -1.37
NEK3-211ENST00000629912 IFNAR1P17181 557 aa6.49□□□□□ -1.37
NEK3-211ENST00000629912 CDC27P30260 824 aa6.49□□□□□ -1.37
NEK3-211ENST00000629912 GPSM2P81274 684 aa6.49□□□□□ -1.37
NEK3-211ENST00000629912 DDR1Q08345 913 aa6.49□□□□□ -1.37
NEK3-211ENST00000629912 WTAPQ15007 396 aa6.49□□□□□ -1.37
NEK3-211ENST00000629912 SEC23AQ15436 765 aa6.49□□□□□ -1.37
NEK3-211ENST00000629912 CTR9Q6PD62 1173 aa6.49□□□□□ -1.37
NEK3-211ENST00000629912 NFXL1Q6ZNB6 911 aa6.49□□□□□ -1.37
NEK3-211ENST00000629912 ZNF804AQ7Z570 1209 aa6.49□□□□□ -1.37
NEK3-211ENST00000629912 WASF1Q92558 559 aa6.49□□□□□ -1.37
NEK3-211ENST00000629912 ANP32BQ92688 251 aaKnown RBP6.49□□□□□ -1.37
NEK3-211ENST00000629912 ESR2Q92731 530 aa6.49□□□□□ -1.37
NEK3-211ENST00000629912 FAM163AQ96GL9 167 aaPredicted RBP6.49□□□□□ -1.37
NEK3-211ENST00000629912 PGBD1Q96JS3 809 aa6.49□□□□□ -1.37
NEK3-211ENST00000629912 C8orf76Q96K31 380 aa6.49□□□□□ -1.37
NEK3-211ENST00000629912 FUCA2Q9BTY2 467 aa6.49□□□□□ -1.37
NEK3-211ENST00000629912 SENP2Q9HC62 589 aa6.49□□□□□ -1.37
NEK3-211ENST00000629912 CD209Q9NNX6 404 aa6.49□□□□□ -1.37
NEK3-211ENST00000629912 RTEL1Q9NZ71 1219 aa6.49□□□□□ -1.37
NEK3-211ENST00000629912 SLC12A7Q9Y666 1083 aa6.49□□□□□ -1.37
NEK3-211ENST00000629912 NRXN2Q9P2S2 1712 aa6.49□□□□□ -1.37
NEK3-211ENST00000629912 MAST2Q6P0Q8 1798 aa6.49□□□□□ -1.37
NEK3-211ENST00000629912 GOLGA8AA7E2F4 631 aa6.48□□□□□ -1.37
NEK3-211ENST00000629912 USP17L12C9JPN9 530 aa6.48□□□□□ -1.37
NEK3-211ENST00000629912 USP17L21D6R901 530 aa6.48□□□□□ -1.37
NEK3-211ENST00000629912 FMNL1O95466 1100 aaPredicted RBP6.48□□□□□ -1.37
NEK3-211ENST00000629912 YEATS4O95619 227 aa6.48□□□□□ -1.37
NEK3-211ENST00000629912 BAG3O95817 575 aa6.48□□□□□ -1.37
NEK3-211ENST00000629912 LDHBP07195 334 aaKnown RBP6.48□□□□□ -1.37
NEK3-211ENST00000629912 SLC3A2P08195 630 aaKnown RBP6.48□□□□□ -1.37
NEK3-211ENST00000629912 LIG1P18858 919 aa6.48□□□□□ -1.37
NEK3-211ENST00000629912 IARSP41252 1262 aaKnown RBP6.48□□□□□ -1.37
NEK3-211ENST00000629912 SSRP1Q08945 709 aaKnown RBP6.48□□□□□ -1.37
NEK3-211ENST00000629912 CHAF1AQ13111 956 aaPredicted RBP6.48□□□□□ -1.37
NEK3-211ENST00000629912 HS1BP3Q53T59 392 aa6.48□□□□□ -1.37
NEK3-211ENST00000629912 RBM43Q6ZSC3 357 aaKnown RBP6.48□□□□□ -1.37
NEK3-211ENST00000629912 ILDR1Q86SU0 546 aaPredicted RBP6.48□□□□□ -1.37
NEK3-211ENST00000629912 COL23A1Q86Y22 540 aaPredicted RBP6.48□□□□□ -1.37
NEK3-211ENST00000629912 FAM43AQ8N2R8 423 aa6.48□□□□□ -1.37
NEK3-211ENST00000629912 CRACR2BQ8N4Y2 399 aaPredicted RBP6.48□□□□□ -1.37
NEK3-211ENST00000629912 FANCBQ8NB91 859 aa6.48□□□□□ -1.37
NEK3-211ENST00000629912 SDR42E1Q8WUS8 393 aa6.48□□□□□ -1.37
NEK3-211ENST00000629912 ANKS1AQ92625 1134 aa6.48□□□□□ -1.37
NEK3-211ENST00000629912 PDLIM2Q96JY6 352 aa6.48□□□□□ -1.37
NEK3-211ENST00000629912 DCP1AQ9NPI6 582 aaPredicted RBP6.48□□□□□ -1.37
NEK3-211ENST00000629912 DDX19AQ9NUU7 478 aaKnown RBP6.48□□□□□ -1.37
NEK3-211ENST00000629912 POLR3EQ9NVU0 708 aa6.48□□□□□ -1.37
NEK3-211ENST00000629912 MKRN1Q9UHC7 482 aaKnown RBP6.48□□□□□ -1.37
NEK3-211ENST00000629912 GGA1Q9UJY5 639 aa6.48□□□□□ -1.37
NEK3-211ENST00000629912 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.48□□□□□ -1.37
NEK3-211ENST00000629912 ATP6V0A2Q9Y487 856 aa6.48□□□□□ -1.37
NEK3-211ENST00000629912 DLEC1Q9Y238 1755 aa6.48□□□□□ -1.37
NEK3-211ENST00000629912 FAM205AQ6ZU69 1335 aa6.48□□□□□ -1.37
NEK3-211ENST00000629912 GPR75-ASB3A0A0A6YYF3 556 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 A0A1W2PQ27 194 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 A0A1W2PQ64 194 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 A0A1W2PQD8 194 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 CTAGE5O15320 804 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 APBA3O96018 575 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 CALM1P0DP23 149 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 CALM2P0DP24 149 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 CALM3P0DP25 149 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 NPR1P16066 1061 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 U2AF2P26368 475 aaKnown RBP eCLIP6.47□□□□□ -1.37
NEK3-211ENST00000629912 RXRBP28702 533 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 PRDX5P30044 214 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 ALDH1B1P30837 517 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 PDE6BP35913 854 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 GUCY1B3Q02153 619 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 KIF23Q02241 960 aaPredicted RBP6.47□□□□□ -1.37
NEK3-211ENST00000629912 RTN1Q16799 776 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 CCDC178Q5BJE1 867 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 RRP12Q5JTH9 1297 aaKnown RBP6.47□□□□□ -1.37
NEK3-211ENST00000629912 C12orf60Q5U649 245 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 KRT40Q6A162 431 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 ADALQ6DHV7 355 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 NBPF11Q86T75 865 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 IQCA1Q86XH1 822 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 DZIP1Q86YF9 867 aaKnown RBP6.47□□□□□ -1.37
NEK3-211ENST00000629912 SLF2Q8IX21 1173 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 ZNF654Q8IZM8 581 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 LINC00301Q8NCQ3 95 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 TBC1D16Q8TBP0 767 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 TBC1D22AQ8WUA7 517 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 USP28Q96RU2 1077 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms